RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 ZFPM2Q8WW38 1151 aa11.23□□□□□ -0.61
PFDN1-201ENST00000261813 RSC1A1Q92681 617 aa11.23□□□□□ -0.61
PFDN1-201ENST00000261813 PDLIM5Q96HC4 596 aaKnown RBP11.23□□□□□ -0.61
PFDN1-201ENST00000261813 GFM1Q96RP9 751 aaKnown RBP11.23□□□□□ -0.61
PFDN1-201ENST00000261813 NUDT22Q9BRQ3 303 aa11.23□□□□□ -0.61
PFDN1-201ENST00000261813 MVB12BQ9H7P6 319 aa11.23□□□□□ -0.61
PFDN1-201ENST00000261813 CAB39LQ9H9S4 337 aa11.23□□□□□ -0.61
PFDN1-201ENST00000261813 RDH14Q9HBH5 336 aa11.23□□□□□ -0.61
PFDN1-201ENST00000261813 PRM3Q9NNZ6 103 aa11.23□□□□□ -0.61
PFDN1-201ENST00000261813 INTS9Q9NV88 658 aaKnown RBP11.23□□□□□ -0.61
PFDN1-201ENST00000261813 PGPEP1Q9NXJ5 209 aa11.23□□□□□ -0.61
PFDN1-201ENST00000261813 PLLPQ9Y342 182 aa11.23□□□□□ -0.61
PFDN1-201ENST00000261813 ASXL3Q9C0F0 2248 aa11.22□□□□□ -0.61
PFDN1-201ENST00000261813 FAM149AA5PLN7 773 aa11.22□□□□□ -0.61
PFDN1-201ENST00000261813 PHGDHO43175 533 aaKnown RBP11.22□□□□□ -0.61
PFDN1-201ENST00000261813 ZW10O43264 779 aa11.22□□□□□ -0.61
PFDN1-201ENST00000261813 DUX1O43812 170 aa11.22□□□□□ -0.61
PFDN1-201ENST00000261813 SPAG7O75391 227 aa11.22□□□□□ -0.61
PFDN1-201ENST00000261813 CPNE6O95741 557 aa11.22□□□□□ -0.61
PFDN1-201ENST00000261813 CCDC166P0CW27 439 aa11.22□□□□□ -0.61
PFDN1-201ENST00000261813 TPBGLP0DKB5 382 aa11.22□□□□□ -0.61
PFDN1-201ENST00000261813 ZNF37AP17032 561 aaPredicted RBP11.22□□□□□ -0.61
PFDN1-201ENST00000261813 TYRP1P17643 537 aa11.22□□□□□ -0.61
PFDN1-201ENST00000261813 SPINK2P20155 84 aa11.22□□□□□ -0.61
PFDN1-201ENST00000261813 ZNF460Q14592 562 aa11.22□□□□□ -0.61
PFDN1-201ENST00000261813 PLCL1Q15111 1095 aa11.22□□□□□ -0.61
PFDN1-201ENST00000261813 HHATQ5VTY9 493 aa11.22□□□□□ -0.61
PFDN1-201ENST00000261813 PAQR3Q6TCH7 311 aa11.22□□□□□ -0.61
PFDN1-201ENST00000261813 TMEM207Q6UWW9 146 aa11.22□□□□□ -0.61
PFDN1-201ENST00000261813 CYHR1Q6ZMK1 362 aa11.22□□□□□ -0.61
PFDN1-201ENST00000261813 ZNF574Q6ZN55 896 aaPredicted RBP11.22□□□□□ -0.61
PFDN1-201ENST00000261813 RBM44Q6ZP01 1051 aaKnown RBP11.22□□□□□ -0.61
PFDN1-201ENST00000261813 NEK10Q6ZWH5 1172 aa11.22□□□□□ -0.61
PFDN1-201ENST00000261813 B3GNT8Q7Z7M8 397 aa11.22□□□□□ -0.61
PFDN1-201ENST00000261813 TMPRSS12Q86WS5 348 aa11.22□□□□□ -0.61
PFDN1-201ENST00000261813 CEP97Q8IW35 865 aa11.22□□□□□ -0.61
PFDN1-201ENST00000261813 TRIM42Q8IWZ5 723 aa11.22□□□□□ -0.61
PFDN1-201ENST00000261813 TBC1D21Q8IYX1 336 aa11.22□□□□□ -0.61
PFDN1-201ENST00000261813 DCBLD1Q8N8Z6 715 aa11.22□□□□□ -0.61
PFDN1-201ENST00000261813 RDH11Q8TC12 318 aa11.22□□□□□ -0.61
PFDN1-201ENST00000261813 TCP10LQ8TDR4 215 aa11.22□□□□□ -0.61
PFDN1-201ENST00000261813 SKA2Q8WVK7 121 aaPredicted RBP11.22□□□□□ -0.61
PFDN1-201ENST00000261813 ZCCHC14Q8WYQ9 949 aaKnown RBP11.22□□□□□ -0.61
PFDN1-201ENST00000261813 ZNF775Q96BV0 537 aaPredicted RBP11.22□□□□□ -0.61
PFDN1-201ENST00000261813 UBXN10Q96LJ8 280 aa11.22□□□□□ -0.61
PFDN1-201ENST00000261813 MRPL57Q9BQC6 102 aaKnown RBP11.22□□□□□ -0.61
PFDN1-201ENST00000261813 SCNM1Q9BWG6 230 aa11.22□□□□□ -0.61
PFDN1-201ENST00000261813 DERL2Q9GZP9 239 aa11.22□□□□□ -0.61
PFDN1-201ENST00000261813 TRIT1Q9H3H1 467 aaKnown RBP11.22□□□□□ -0.61
PFDN1-201ENST00000261813 TMEM9Q9P0T7 183 aa11.22□□□□□ -0.61
PFDN1-201ENST00000261813 KLK13Q9UKR3 277 aa11.22□□□□□ -0.61
PFDN1-201ENST00000261813 TMCO1Q9UM00 188 aa11.22□□□□□ -0.61
PFDN1-201ENST00000261813 CLCA2Q9UQC9 943 aa11.22□□□□□ -0.61
PFDN1-201ENST00000261813 RP1P56715 2156 aa11.22□□□□□ -0.61
PFDN1-201ENST00000261813 BAHCC1Q9P281 2608 aa11.22□□□□□ -0.61
PFDN1-201ENST00000261813 GOLGA4Q13439 2230 aaKnown RBP11.22□□□□□ -0.61
PFDN1-201ENST00000261813 KRT87PA6NCN2 255 aa11.21□□□□□ -0.61
PFDN1-201ENST00000261813 POLR3GO15318 223 aaPredicted RBP11.21□□□□□ -0.61
PFDN1-201ENST00000261813 BIRC5O15392 142 aa11.21□□□□□ -0.61
PFDN1-201ENST00000261813 CSO75390 466 aaKnown RBP11.21□□□□□ -0.61
PFDN1-201ENST00000261813 MATN4O95460 622 aa11.21□□□□□ -0.61
PFDN1-201ENST00000261813 C1orf105O95561 183 aa11.21□□□□□ -0.61
PFDN1-201ENST00000261813 TSPAN12O95859 305 aa11.21□□□□□ -0.61
PFDN1-201ENST00000261813 MPC1LP0DKB6 136 aa11.21□□□□□ -0.61
PFDN1-201ENST00000261813 AMD1P17707 334 aa11.21□□□□□ -0.61
PFDN1-201ENST00000261813 RPA3P35244 121 aaPredicted RBP11.21□□□□□ -0.61
PFDN1-201ENST00000261813 BDKRB1P46663 353 aa11.21□□□□□ -0.61
PFDN1-201ENST00000261813 CAPZBP47756 277 aa11.21□□□□□ -0.61
PFDN1-201ENST00000261813 PRKAA2P54646 552 aa11.21□□□□□ -0.61
PFDN1-201ENST00000261813 ZFP36L1Q07352 338 aaKnown RBP11.21□□□□□ -0.61
PFDN1-201ENST00000261813 ASPHQ12797 758 aa11.21□□□□□ -0.61
PFDN1-201ENST00000261813 TARDBPQ13148 414 aaKnown RBP eCLIP11.21□□□□□ -0.61
PFDN1-201ENST00000261813 CLPPQ16740 277 aaPredicted RBP11.21□□□□□ -0.61
PFDN1-201ENST00000261813 ISXQ2M1V0 245 aa11.21□□□□□ -0.61
PFDN1-201ENST00000261813 CCSMST1Q4G0I0 132 aa11.21□□□□□ -0.61
PFDN1-201ENST00000261813 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.21□□□□□ -0.61
PFDN1-201ENST00000261813 PIWIL4Q7Z3Z4 852 aaKnown RBP11.21□□□□□ -0.61
PFDN1-201ENST00000261813 RASGRP3Q8IV61 690 aa11.21□□□□□ -0.61
PFDN1-201ENST00000261813 SLITRK4Q8IW52 837 aa11.21□□□□□ -0.61
PFDN1-201ENST00000261813 DCUN1D3Q8IWE4 304 aa11.21□□□□□ -0.61
PFDN1-201ENST00000261813 CACTIN-AS1Q8N1I8 211 aa11.21□□□□□ -0.61
PFDN1-201ENST00000261813 GALNT15Q8N3T1 639 aa11.21□□□□□ -0.61
PFDN1-201ENST00000261813 RHEBL1Q8TAI7 183 aa11.21□□□□□ -0.61
PFDN1-201ENST00000261813 DENND1AQ8TEH3 1009 aa11.21□□□□□ -0.61
PFDN1-201ENST00000261813 EEF1AKMT1Q8WVE0 214 aa11.21□□□□□ -0.61
PFDN1-201ENST00000261813 DYDC1Q8WWB3 177 aa11.21□□□□□ -0.61
PFDN1-201ENST00000261813 NCSTNQ92542 709 aa11.21□□□□□ -0.61
PFDN1-201ENST00000261813 CCDC126Q96EE4 140 aa11.21□□□□□ -0.61
PFDN1-201ENST00000261813 AHCYL2Q96HN2 611 aaKnown RBP11.21□□□□□ -0.61
PFDN1-201ENST00000261813 DEPDC7Q96QD5 511 aa11.21□□□□□ -0.61
PFDN1-201ENST00000261813 MENTQ9BUN1 341 aa11.21□□□□□ -0.61
PFDN1-201ENST00000261813 SEMA6CQ9H3T2 930 aa11.21□□□□□ -0.61
PFDN1-201ENST00000261813 EPB41L1Q9H4G0 881 aa11.21□□□□□ -0.61
PFDN1-201ENST00000261813 TFB2MQ9H5Q4 396 aaKnown RBP11.21□□□□□ -0.61
PFDN1-201ENST00000261813 XKR8Q9H6D3 395 aa11.21□□□□□ -0.61
PFDN1-201ENST00000261813 CIDEBQ9UHD4 219 aa11.21□□□□□ -0.61
PFDN1-201ENST00000261813 POLG2Q9UHN1 485 aa11.21□□□□□ -0.61
PFDN1-201ENST00000261813 PLAGL1Q9UM63 463 aa11.21□□□□□ -0.61
PFDN1-201ENST00000261813 ICKQ9UPZ9 632 aa11.21□□□□□ -0.61
PFDN1-201ENST00000261813 TDRKHQ9Y2W6 561 aaKnown RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms