RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 TMA16Q96EY4 203 aaKnown RBP5.42□□□□□ -1.54
TOPBP1-201ENST00000260810 CAMK1GQ96NX5 476 aa5.42□□□□□ -1.54
TOPBP1-201ENST00000260810 CNOT10Q9H9A5 744 aaKnown RBP5.42□□□□□ -1.54
TOPBP1-201ENST00000260810 TRPC7Q9HCX4 862 aa5.42□□□□□ -1.54
TOPBP1-201ENST00000260810 MARCOQ9UEW3 520 aaPredicted RBP5.42□□□□□ -1.54
TOPBP1-201ENST00000260810 SRRM3A6NNA2 597 aaPredicted RBP5.42□□□□□ -1.54
TOPBP1-201ENST00000260810 RRP9O43818 475 aaKnown RBP5.42□□□□□ -1.54
TOPBP1-201ENST00000260810 ENTPD5O75356 428 aa5.42□□□□□ -1.54
TOPBP1-201ENST00000260810 PPM1AP35813 382 aa5.42□□□□□ -1.54
TOPBP1-201ENST00000260810 ZNF542PQ5EBM4 170 aa5.42□□□□□ -1.54
TOPBP1-201ENST00000260810 FBXW10Q5XX13 1052 aa5.42□□□□□ -1.54
TOPBP1-201ENST00000260810 HEATR6Q6AI08 1181 aaKnown RBP5.42□□□□□ -1.54
TOPBP1-201ENST00000260810 FAM47EQ6ZV65 393 aa5.42□□□□□ -1.54
TOPBP1-201ENST00000260810 HS3ST5Q8IZT8 346 aa5.42□□□□□ -1.54
TOPBP1-201ENST00000260810 RCBTB1Q8NDN9 531 aa5.42□□□□□ -1.54
TOPBP1-201ENST00000260810 OR4L1Q8NH43 312 aa5.42□□□□□ -1.54
TOPBP1-201ENST00000260810 SCYL1Q96KG9 808 aa5.42□□□□□ -1.54
TOPBP1-201ENST00000260810 SLC13A1Q9BZW2 595 aa5.42□□□□□ -1.54
TOPBP1-201ENST00000260810 ASAH2Q9NR71 780 aa5.42□□□□□ -1.54
TOPBP1-201ENST00000260810 GPRC5BQ9NZH0 403 aa5.42□□□□□ -1.54
TOPBP1-201ENST00000260810 TMEM181Q9P2C4 612 aa5.42□□□□□ -1.54
TOPBP1-201ENST00000260810 GPR55Q9Y2T6 319 aaPredicted RBP5.42□□□□□ -1.54
TOPBP1-201ENST00000260810 ASB4Q9Y574 426 aa5.42□□□□□ -1.54
TOPBP1-201ENST00000260810 TENM3Q9P273 2699 aa5.42□□□□□ -1.54
TOPBP1-201ENST00000260810 PTPRZ1P23471 2315 aaPredicted RBP5.42□□□□□ -1.54
TOPBP1-201ENST00000260810 PRR32B1ATL7 298 aa5.42□□□□□ -1.54
TOPBP1-201ENST00000260810 ATP6V1B2P21281 511 aa5.42□□□□□ -1.54
TOPBP1-201ENST00000260810 HLCSP50747 726 aa5.42□□□□□ -1.54
TOPBP1-201ENST00000260810 SEC13P55735 322 aa5.42□□□□□ -1.54
TOPBP1-201ENST00000260810 RFTN1Q14699 578 aaPredicted RBP5.42□□□□□ -1.54
TOPBP1-201ENST00000260810 PPP1R7Q15435 360 aa5.42□□□□□ -1.54
TOPBP1-201ENST00000260810 ASPHD2Q6ICH7 369 aa5.42□□□□□ -1.54
TOPBP1-201ENST00000260810 LAPTM4BQ86VI4 370 aa5.42□□□□□ -1.54
TOPBP1-201ENST00000260810 PPM1NQ8N819 430 aa5.42□□□□□ -1.54
TOPBP1-201ENST00000260810 ZNF485Q8NCK3 441 aa5.42□□□□□ -1.54
TOPBP1-201ENST00000260810 DTNBP1Q96EV8 351 aa5.42□□□□□ -1.54
TOPBP1-201ENST00000260810 CFAP36Q96G28 342 aa5.42□□□□□ -1.54
TOPBP1-201ENST00000260810 TSSK1BQ9BXA7 367 aa5.42□□□□□ -1.54
TOPBP1-201ENST00000260810 SAMD15Q9P1V8 674 aa5.42□□□□□ -1.54
TOPBP1-201ENST00000260810 MAST4O15021 2626 aa5.42□□□□□ -1.54
TOPBP1-201ENST00000260810 PRSS51A0A1B0GVH4 220 aa5.42□□□□□ -1.54
TOPBP1-201ENST00000260810 CYR61O00622 381 aa5.42□□□□□ -1.54
TOPBP1-201ENST00000260810 RASGRF2O14827 1237 aa5.42□□□□□ -1.54
TOPBP1-201ENST00000260810 APOA4P06727 396 aa5.42□□□□□ -1.54
TOPBP1-201ENST00000260810 Q0VFX4 171 aa5.42□□□□□ -1.54
TOPBP1-201ENST00000260810 TAF11Q15544 211 aa5.42□□□□□ -1.54
TOPBP1-201ENST00000260810 FNDC7Q5VTL7 733 aa5.42□□□□□ -1.54
TOPBP1-201ENST00000260810 RAB44Q7Z6P3 723 aaPredicted RBP5.42□□□□□ -1.54
TOPBP1-201ENST00000260810 MTDHQ86UE4 582 aaKnown RBP5.42□□□□□ -1.54
TOPBP1-201ENST00000260810 LAS2Q8IYD9 372 aa5.42□□□□□ -1.54
TOPBP1-201ENST00000260810 POU5F2Q8N7G0 328 aa5.42□□□□□ -1.54
TOPBP1-201ENST00000260810 WDR48Q8TAF3 677 aa5.42□□□□□ -1.54
TOPBP1-201ENST00000260810 PIP4K2CQ8TBX8 421 aa5.42□□□□□ -1.54
TOPBP1-201ENST00000260810 CDKL2Q92772 493 aa5.42□□□□□ -1.54
TOPBP1-201ENST00000260810 CNRIP1Q96F85 164 aaPredicted RBP5.42□□□□□ -1.54
TOPBP1-201ENST00000260810 AURKBQ96GD4 344 aaPredicted RBP5.42□□□□□ -1.54
TOPBP1-201ENST00000260810 CLDND1Q9NY35 253 aa5.42□□□□□ -1.54
TOPBP1-201ENST00000260810 C5AR2Q9P296 337 aa5.42□□□□□ -1.54
TOPBP1-201ENST00000260810 RSPH14Q9UHP6 348 aa5.42□□□□□ -1.54
TOPBP1-201ENST00000260810 VPS4AQ9UN37 437 aa5.42□□□□□ -1.54
TOPBP1-201ENST00000260810 DSPPQ9NZW4 1301 aa5.42□□□□□ -1.54
TOPBP1-201ENST00000260810 SMIM23A6NLE4 172 aa5.42□□□□□ -1.54
TOPBP1-201ENST00000260810 CAPN9O14815 690 aa5.42□□□□□ -1.54
TOPBP1-201ENST00000260810 EFNA2O43921 213 aa5.42□□□□□ -1.54
TOPBP1-201ENST00000260810 RNF8O76064 485 aa5.42□□□□□ -1.54
TOPBP1-201ENST00000260810 GNAO1P09471 354 aa5.42□□□□□ -1.54
TOPBP1-201ENST00000260810 GDI1P31150 447 aa5.42□□□□□ -1.54
TOPBP1-201ENST00000260810 CRISP3P54108 245 aa5.42□□□□□ -1.54
TOPBP1-201ENST00000260810 RAB10P61026 200 aa5.42□□□□□ -1.54
TOPBP1-201ENST00000260810 TSPY1Q01534 308 aa5.42□□□□□ -1.54
TOPBP1-201ENST00000260810 ZBTB16Q05516 673 aa5.42□□□□□ -1.54
TOPBP1-201ENST00000260810 LYPD8Q6UX82 237 aa5.42□□□□□ -1.54
TOPBP1-201ENST00000260810 ZNF605Q86T29 641 aa5.42□□□□□ -1.54
TOPBP1-201ENST00000260810 THEM5Q8N1Q8 247 aa5.42□□□□□ -1.54
TOPBP1-201ENST00000260810 CPA6Q8N4T0 437 aa5.42□□□□□ -1.54
TOPBP1-201ENST00000260810 FBLIM1Q8WUP2 373 aa5.42□□□□□ -1.54
TOPBP1-201ENST00000260810 POLR1EQ9GZS1 481 aaKnown RBP5.42□□□□□ -1.54
TOPBP1-201ENST00000260810 RBM38Q9H0Z9 239 aaKnown RBP5.42□□□□□ -1.54
TOPBP1-201ENST00000260810 RETREG1Q9H6L5 497 aa5.42□□□□□ -1.54
TOPBP1-201ENST00000260810 TAAR2Q9P1P5 351 aa5.42□□□□□ -1.54
TOPBP1-201ENST00000260810 RHBDD3Q9Y3P4 386 aa5.42□□□□□ -1.54
TOPBP1-201ENST00000260810 L3MBTL1Q9Y468 752 aa5.42□□□□□ -1.54
TOPBP1-201ENST00000260810 POLEQ07864 2286 aa5.41□□□□□ -1.54
TOPBP1-201ENST00000260810 OR2AG2A6NM03 316 aa5.41□□□□□ -1.54
TOPBP1-201ENST00000260810 PGRMC2O15173 223 aa5.41□□□□□ -1.54
TOPBP1-201ENST00000260810 XRCC1P18887 633 aaPredicted RBP5.41□□□□□ -1.54
TOPBP1-201ENST00000260810 PPP3CCP48454 512 aa5.41□□□□□ -1.54
TOPBP1-201ENST00000260810 CLDN15P56746 228 aa5.41□□□□□ -1.54
TOPBP1-201ENST00000260810 ELAVL2Q12926 359 aaKnown RBP5.41□□□□□ -1.54
TOPBP1-201ENST00000260810 PREPLQ4J6C6 727 aaPredicted RBP5.41□□□□□ -1.54
TOPBP1-201ENST00000260810 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.41□□□□□ -1.54
TOPBP1-201ENST00000260810 MAATS1Q7Z4T9 603 aa5.41□□□□□ -1.54
TOPBP1-201ENST00000260810 ABHD11Q8NFV4 315 aa5.41□□□□□ -1.54
TOPBP1-201ENST00000260810 UBE2FQ969M7 185 aa5.41□□□□□ -1.54
TOPBP1-201ENST00000260810 SLC12A9Q9BXP2 914 aa5.41□□□□□ -1.54
TOPBP1-201ENST00000260810 WDR91A4D1P6 747 aa5.41□□□□□ -1.54
TOPBP1-201ENST00000260810 ZBBXA8MT70 800 aa5.41□□□□□ -1.54
TOPBP1-201ENST00000260810 POC1B-GALNT4F8VUJ3 575 aa5.41□□□□□ -1.54
TOPBP1-201ENST00000260810 TAF4O00268 1085 aa5.41□□□□□ -1.54
TOPBP1-201ENST00000260810 PSMD3O43242 534 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms