RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 PER3P56645 1201 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 DEFA1P59665 94 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 DEFA3P59666 94 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 STAT4Q14765 748 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 GRM3Q14832 879 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 NEDD8Q15843 81 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 IL27RAQ6UWB1 636 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 GADL1Q6ZQY3 521 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 KCTD8Q6ZWB6 473 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 PIWIL4Q7Z3Z4 852 aaKnown RBP7.57□□□□□ -1.2
GPNMB-201ENST00000258733 TMCO2Q7Z6W1 182 aaPredicted RBP7.57□□□□□ -1.2
GPNMB-201ENST00000258733 PPIL6Q8IXY8 311 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 ZZZ3Q8IYH5 903 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 TCTE3Q8IZS6 198 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 EMC1Q8N766 993 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 POGLUT1Q8NBL1 392 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 OR10H5Q8NGA6 315 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 OXER1Q8TDS5 423 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 ELMO2Q96JJ3 720 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 CSF3RQ99062 836 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 PRRG3Q9BZD7 231 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 CABP2Q9NPB3 220 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 TMEM39AQ9NV64 488 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 CLEC5AQ9NY25 188 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 RIMS3Q9UJD0 308 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 POLR3HQ9Y535 204 aaPredicted RBP7.57□□□□□ -1.2
GPNMB-201ENST00000258733 ACTL7BQ9Y614 415 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 FRMPD2Q68DX3 1309 aaPredicted RBP7.57□□□□□ -1.2
GPNMB-201ENST00000258733 RPS10-NUDT3A0A1W2PQS6 291 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 CCDC154A6NI56 674 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 F6X3S4 739 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 H0YAE9 185 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 IFNGP01579 166 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 POU2F2P09086 479 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 USP17L7P0C7H9 530 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 TMEM191BP0C7N4 346 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 RPL10P27635 214 aaKnown RBP7.57□□□□□ -1.2
GPNMB-201ENST00000258733 LCN1P31025 176 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 FMO3P31513 532 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 BMP8BP34820 402 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 AHRP35869 848 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 KCNJ3P48549 501 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 GRAPQ13588 217 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 CXXC5Q7LFL8 322 aaKnown RBP7.57□□□□□ -1.2
GPNMB-201ENST00000258733 BMP8AQ7Z5Y6 402 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 RNF113BQ8IZP6 322 aaKnown RBP7.57□□□□□ -1.2
GPNMB-201ENST00000258733 ABRAQ8N0Z2 381 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 FAM47BQ8NA70 645 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 TXNDC5Q8NBS9 432 aaKnown RBP7.57□□□□□ -1.2
GPNMB-201ENST00000258733 NETO2Q8NC67 525 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 BLOC1S5Q8TDH9 187 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 DDX17Q92841 729 aaKnown RBP7.57□□□□□ -1.2
GPNMB-201ENST00000258733 S100PBPQ96BU1 408 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 CCDC124Q96CT7 223 aaKnown RBP7.57□□□□□ -1.2
GPNMB-201ENST00000258733 MARS2Q96GW9 593 aaKnown RBP7.57□□□□□ -1.2
GPNMB-201ENST00000258733 TREX2Q9BQ50 279 aaPredicted RBP7.57□□□□□ -1.2
GPNMB-201ENST00000258733 TRMOQ9BU70 441 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 ANKRD60Q9BZ19 345 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 CELF4Q9BZC1 486 aaKnown RBP7.57□□□□□ -1.2
GPNMB-201ENST00000258733 REXO4Q9GZR2 422 aaKnown RBP7.57□□□□□ -1.2
GPNMB-201ENST00000258733 GSX1Q9H4S2 264 aaPredicted RBP7.57□□□□□ -1.2
GPNMB-201ENST00000258733 MCUBQ9NWR8 336 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 TAB2Q9NYJ8 693 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 TBC1D29Q9UFV1 150 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 GPR160Q9UJ42 338 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 TRPC5Q9UL62 973 aaPredicted RBP7.57□□□□□ -1.2
GPNMB-201ENST00000258733 NDRG2Q9UN36 371 aaKnown RBP7.57□□□□□ -1.2
GPNMB-201ENST00000258733 POMPQ9Y244 141 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 ARHGEF10O15013 1369 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 ZMYM2Q9UBW7 1377 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 MPTX1A8MV57 137 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 ZNF213O14771 459 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 LCMT2O60294 686 aaKnown RBP7.57□□□□□ -1.2
GPNMB-201ENST00000258733 UGT2B11O75310 529 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 BCAS2O75934 225 aaPredicted RBP7.57□□□□□ -1.2
GPNMB-201ENST00000258733 USP17L8P0C7I0 530 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 RAB3BP20337 219 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 ADSSP30520 456 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 HOXA9P31269 272 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 PLK1P53350 603 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 CDH8P55286 799 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 ACTBP60709 375 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 ACTA2P62736 377 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 ACTG1P63261 375 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 ACTG2P63267 376 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 ACTC1P68032 377 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 ACTA1P68133 377 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 POU4F2Q12837 409 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 MRPL49Q13405 166 aaKnown RBP7.57□□□□□ -1.2
GPNMB-201ENST00000258733 BAK1Q16611 211 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 SYT16Q17RD7 645 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 CCDC142Q17RM4 750 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 ATP13A5Q4VNC0 1218 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 SPOUT1Q5T280 376 aaKnown RBP7.57□□□□□ -1.2
GPNMB-201ENST00000258733 LRRC66Q68CR7 880 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 DPP8Q6V1X1 898 aaPredicted RBP7.57□□□□□ -1.2
GPNMB-201ENST00000258733 ZNF517Q6ZMY9 492 aaPredicted RBP7.57□□□□□ -1.2
GPNMB-201ENST00000258733 SERINC5Q86VE9 423 aa7.57□□□□□ -1.2
GPNMB-201ENST00000258733 ZSCAN29Q8IWY8 852 aaPredicted RBP7.57□□□□□ -1.2
GPNMB-201ENST00000258733 C1orf52Q8N6N3 182 aaKnown RBP7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms