RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 PTBP2Q9UKA9 531 aaKnown RBP13.65□□□□□ -0.22
VPS25-201ENST00000253794 POMT2Q9UKY4 750 aa13.65□□□□□ -0.22
VPS25-201ENST00000253794 EMCNQ9ULC0 261 aa13.65□□□□□ -0.22
VPS25-201ENST00000253794 KLK4Q9Y5K2 254 aa13.65□□□□□ -0.22
VPS25-201ENST00000253794 SPEGQ15772 3267 aa13.64□□□□□ -0.23
VPS25-201ENST00000253794 SPAARA0A1B0GVQ0 90 aa13.64□□□□□ -0.23
VPS25-201ENST00000253794 PIPSLA2A3N6 862 aa13.64□□□□□ -0.23
VPS25-201ENST00000253794 C2orf74A8MZ97 194 aa13.64□□□□□ -0.23
VPS25-201ENST00000253794 DYNC1I1O14576 645 aa13.64□□□□□ -0.23
VPS25-201ENST00000253794 GIPC1O14908 333 aa13.64□□□□□ -0.23
VPS25-201ENST00000253794 SYF2O95926 243 aaKnown RBP13.64□□□□□ -0.23
VPS25-201ENST00000253794 ANKRD34CP0C6C1 535 aa13.64□□□□□ -0.23
VPS25-201ENST00000253794 AMD1P17707 334 aa13.64□□□□□ -0.23
VPS25-201ENST00000253794 NFKB2Q00653 900 aa13.64□□□□□ -0.23
VPS25-201ENST00000253794 INSM1Q01101 510 aaPredicted RBP13.64□□□□□ -0.23
VPS25-201ENST00000253794 PRKAA1Q13131 559 aa13.64□□□□□ -0.23
VPS25-201ENST00000253794 PUM1Q14671 1186 aaKnown RBP eCLIP13.64□□□□□ -0.23
VPS25-201ENST00000253794 SLC5A12Q1EHB4 618 aa13.64□□□□□ -0.23
VPS25-201ENST00000253794 CCDC153Q494R4 210 aa13.64□□□□□ -0.23
VPS25-201ENST00000253794 NKAIN2Q5VXU1 208 aa13.64□□□□□ -0.23
VPS25-201ENST00000253794 MBOAT1Q6ZNC8 495 aa13.64□□□□□ -0.23
VPS25-201ENST00000253794 PRSS42Q7Z5A4 293 aa13.64□□□□□ -0.23
VPS25-201ENST00000253794 SLITRK4Q8IW52 837 aa13.64□□□□□ -0.23
VPS25-201ENST00000253794 LMNTD1Q8N9Z9 388 aa13.64□□□□□ -0.23
VPS25-201ENST00000253794 RDH11Q8TC12 318 aa13.64□□□□□ -0.23
VPS25-201ENST00000253794 ZDHHC12Q96GR4 267 aa13.64□□□□□ -0.23
VPS25-201ENST00000253794 AHCYL2Q96HN2 611 aaKnown RBP13.64□□□□□ -0.23
VPS25-201ENST00000253794 NUDT22Q9BRQ3 303 aa13.64□□□□□ -0.23
VPS25-201ENST00000253794 PCBD2Q9H0N5 130 aa13.64□□□□□ -0.23
VPS25-201ENST00000253794 ABCG4Q9H172 646 aa13.64□□□□□ -0.23
VPS25-201ENST00000253794 SPHK1Q9NYA1 384 aa13.64□□□□□ -0.23
VPS25-201ENST00000253794 UTP6Q9NYH9 597 aaKnown RBP13.64□□□□□ -0.23
VPS25-201ENST00000253794 CIDEBQ9UHD4 219 aa13.64□□□□□ -0.23
VPS25-201ENST00000253794 PLLPQ9Y342 182 aa13.64□□□□□ -0.23
VPS25-201ENST00000253794 DCHS1Q96JQ0 3298 aa13.63□□□□□ -0.23
VPS25-201ENST00000253794 TK2O00142 265 aa13.63□□□□□ -0.23
VPS25-201ENST00000253794 CASC3O15234 703 aaKnown RBP13.63□□□□□ -0.23
VPS25-201ENST00000253794 CAPN5O15484 640 aaPredicted RBP13.63□□□□□ -0.23
VPS25-201ENST00000253794 TAPBPO15533 448 aa13.63□□□□□ -0.23
VPS25-201ENST00000253794 PRPF4O43172 522 aaKnown RBP eCLIP13.63□□□□□ -0.23
VPS25-201ENST00000253794 PLIN3O60664 434 aa13.63□□□□□ -0.23
VPS25-201ENST00000253794 PROCP04070 461 aa13.63□□□□□ -0.23
VPS25-201ENST00000253794 THRAP10827 490 aa13.63□□□□□ -0.23
VPS25-201ENST00000253794 TYRP1P17643 537 aa13.63□□□□□ -0.23
VPS25-201ENST00000253794 POLR2CP19387 275 aaPredicted RBP13.63□□□□□ -0.23
VPS25-201ENST00000253794 OAS2P29728 719 aaKnown RBP13.63□□□□□ -0.23
VPS25-201ENST00000253794 PDX1P52945 283 aa13.63□□□□□ -0.23
VPS25-201ENST00000253794 SLC18A1P54219 525 aa13.63□□□□□ -0.23
VPS25-201ENST00000253794 ALDH18A1P54886 795 aaKnown RBP13.63□□□□□ -0.23
VPS25-201ENST00000253794 TBPL1P62380 186 aa13.63□□□□□ -0.23
VPS25-201ENST00000253794 ZFP36L1Q07352 338 aaKnown RBP13.63□□□□□ -0.23
VPS25-201ENST00000253794 TRA2AQ13595 282 aaKnown RBP eCLIP13.63□□□□□ -0.23
VPS25-201ENST00000253794 SPIDRQ14159 915 aa13.63□□□□□ -0.23
VPS25-201ENST00000253794 FASTKQ14296 549 aaKnown RBP13.63□□□□□ -0.23
VPS25-201ENST00000253794 AMZ1Q400G9 498 aa13.63□□□□□ -0.23
VPS25-201ENST00000253794 N4BP2L1Q5TBK1 243 aaPredicted RBP13.63□□□□□ -0.23
VPS25-201ENST00000253794 SPESP1Q6UW49 350 aa13.63□□□□□ -0.23
VPS25-201ENST00000253794 ZNF574Q6ZN55 896 aaPredicted RBP13.63□□□□□ -0.23
VPS25-201ENST00000253794 RBM44Q6ZP01 1051 aaKnown RBP13.63□□□□□ -0.23
VPS25-201ENST00000253794 TMPRSS9Q7Z410 1059 aa13.63□□□□□ -0.23
VPS25-201ENST00000253794 SYTL1Q8IYJ3 562 aa13.63□□□□□ -0.23
VPS25-201ENST00000253794 OR2A1Q8NGT9 310 aa13.63□□□□□ -0.23
VPS25-201ENST00000253794 ADAMTS14Q8WXS8 1223 aa13.63□□□□□ -0.23
VPS25-201ENST00000253794 NCSTNQ92542 709 aa13.63□□□□□ -0.23
VPS25-201ENST00000253794 GRAMD1AQ96CP6 724 aa13.63□□□□□ -0.23
VPS25-201ENST00000253794 OR2A14Q96R47 310 aa13.63□□□□□ -0.23
VPS25-201ENST00000253794 TMEM79Q9BSE2 394 aa13.63□□□□□ -0.23
VPS25-201ENST00000253794 CHRNA10Q9GZZ6 450 aa13.63□□□□□ -0.23
VPS25-201ENST00000253794 CCDC177Q9NQR7 707 aaPredicted RBP13.63□□□□□ -0.23
VPS25-201ENST00000253794 ACTR10Q9NZ32 417 aa13.63□□□□□ -0.23
VPS25-201ENST00000253794 CD274Q9NZQ7 290 aa13.63□□□□□ -0.23
VPS25-201ENST00000253794 TLCD2A6NGC4 264 aa13.62□□□□□ -0.23
VPS25-201ENST00000253794 STX16-NPEPL1H3BU86 382 aa13.62□□□□□ -0.23
VPS25-201ENST00000253794 UBXN8O00124 270 aa13.62□□□□□ -0.23
VPS25-201ENST00000253794 STX16O14662 325 aa13.62□□□□□ -0.23
VPS25-201ENST00000253794 GUCA1CO95843 209 aa13.62□□□□□ -0.23
VPS25-201ENST00000253794 CREB1P16220 341 aa13.62□□□□□ -0.23
VPS25-201ENST00000253794 UGT2B7P16662 529 aa13.62□□□□□ -0.23
VPS25-201ENST00000253794 PRDX3P30048 256 aaKnown RBP13.62□□□□□ -0.23
VPS25-201ENST00000253794 CCKBRP32239 447 aa13.62□□□□□ -0.23
VPS25-201ENST00000253794 GFERP55789 205 aa13.62□□□□□ -0.23
VPS25-201ENST00000253794 ABATP80404 500 aa13.62□□□□□ -0.23
VPS25-201ENST00000253794 SETDB1Q15047 1291 aa13.62□□□□□ -0.23
VPS25-201ENST00000253794 PCBP2Q15366 365 aaKnown RBP eCLIP13.62□□□□□ -0.232e-12■□□□□ 9.2
VPS25-201ENST00000253794 PTCHD3Q3KNS1 767 aa13.62□□□□□ -0.23
VPS25-201ENST00000253794 CAPN13Q6MZZ7 669 aaPredicted RBP13.62□□□□□ -0.23
VPS25-201ENST00000253794 ARMC6Q6NXE6 501 aa13.62□□□□□ -0.23
VPS25-201ENST00000253794 LCTLQ6UWM7 567 aa13.62□□□□□ -0.23
VPS25-201ENST00000253794 ARHGAP22Q7Z5H3 698 aa13.62□□□□□ -0.23
VPS25-201ENST00000253794 SCYL1Q96KG9 808 aa13.62□□□□□ -0.23
VPS25-201ENST00000253794 ATP6V1G3Q96LB4 118 aa13.62□□□□□ -0.23
VPS25-201ENST00000253794 EGFL8Q99944 293 aa13.62□□□□□ -0.23
VPS25-201ENST00000253794 C1QTNF3Q9BXJ4 246 aa13.62□□□□□ -0.23
VPS25-201ENST00000253794 ACBD3Q9H3P7 528 aa13.62□□□□□ -0.23
VPS25-201ENST00000253794 CENPHQ9H3R5 247 aa13.62□□□□□ -0.23
VPS25-201ENST00000253794 CNOT10Q9H9A5 744 aaKnown RBP13.62□□□□□ -0.23
VPS25-201ENST00000253794 C1GALT1Q9NS00 363 aa13.62□□□□□ -0.23
VPS25-201ENST00000253794 INTS7Q9NVH2 962 aaKnown RBP13.62□□□□□ -0.23
VPS25-201ENST00000253794 PCDHB11Q9Y5F2 797 aa13.62□□□□□ -0.23
VPS25-201ENST00000253794 SPTBN4Q9H254 2564 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms