RNA–Protein interactions for RNA: ENST00000248633.8

PEX1-201, Transcript of peroxisomal biogenesis factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PEX1, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1-201ENST00000248633 TMED5Q9Y3A6 229 aa13.04□□□□□ -0.32
PEX1-201ENST00000248633 YIPF1Q9Y548 306 aa13.04□□□□□ -0.32
PEX1-201ENST00000248633 CPQQ9Y646 472 aa13.04□□□□□ -0.32
PEX1-201ENST00000248633 FPGTO14772 594 aa13.04□□□□□ -0.32
PEX1-201ENST00000248633 TSPAN19P0C672 248 aa13.04□□□□□ -0.32
PEX1-201ENST00000248633 CD300CQ08708 224 aa13.04□□□□□ -0.32
PEX1-201ENST00000248633 TUBA3CQ13748 450 aa13.04□□□□□ -0.32
PEX1-201ENST00000248633 MBTPS1Q14703 1052 aa13.04□□□□□ -0.32
PEX1-201ENST00000248633 RETSATQ6NUM9 610 aa13.04□□□□□ -0.32
PEX1-201ENST00000248633 DDX53Q86TM3 631 aaKnown RBP13.04□□□□□ -0.32
PEX1-201ENST00000248633 MFSD6LQ8IWD5 586 aa13.04□□□□□ -0.32
PEX1-201ENST00000248633 PHF10Q8WUB8 498 aaKnown RBP13.04□□□□□ -0.32
PEX1-201ENST00000248633 NELL1Q92832 810 aa13.04□□□□□ -0.32
PEX1-201ENST00000248633 RPL3LQ92901 407 aaKnown RBP13.04□□□□□ -0.32
PEX1-201ENST00000248633 NACC2Q96BF6 587 aa13.04□□□□□ -0.32
PEX1-201ENST00000248633 LGALS12Q96DT0 336 aa13.04□□□□□ -0.32
PEX1-201ENST00000248633 CASD1Q96PB1 797 aa13.04□□□□□ -0.32
PEX1-201ENST00000248633 SNTG1Q9NSN8 517 aa13.04□□□□□ -0.32
PEX1-201ENST00000248633 POU2F3Q9UKI9 436 aa13.04□□□□□ -0.32
PEX1-201ENST00000248633 SLC28A1O00337 649 aa13.04□□□□□ -0.32
PEX1-201ENST00000248633 ACSL4O60488 711 aa13.04□□□□□ -0.32
PEX1-201ENST00000248633 PGRP06401 933 aa13.04□□□□□ -0.32
PEX1-201ENST00000248633 KRT20P35900 424 aa13.04□□□□□ -0.32
PEX1-201ENST00000248633 KCNQ1P51787 676 aa13.04□□□□□ -0.32
PEX1-201ENST00000248633 RAB25P57735 213 aa13.04□□□□□ -0.32
PEX1-201ENST00000248633 ELP6Q0PNE2 266 aa13.04□□□□□ -0.32
PEX1-201ENST00000248633 IL18R1Q13478 541 aa13.04□□□□□ -0.32
PEX1-201ENST00000248633 RAPSNQ13702 412 aa13.04□□□□□ -0.32
PEX1-201ENST00000248633 ZNF404Q494X3 552 aa13.04□□□□□ -0.32
PEX1-201ENST00000248633 FBXL22Q6P050 247 aa13.04□□□□□ -0.32
PEX1-201ENST00000248633 TBPL2Q6SJ96 375 aa13.04□□□□□ -0.32
PEX1-201ENST00000248633 PTCHD4Q6ZW05 846 aa13.04□□□□□ -0.32
PEX1-201ENST00000248633 RBM23Q86U06 439 aaKnown RBP13.04□□□□□ -0.32
PEX1-201ENST00000248633 C1orf109Q9NX04 203 aa13.04□□□□□ -0.32
PEX1-201ENST00000248633 RAB23Q9ULC3 237 aa13.04□□□□□ -0.32
PEX1-201ENST00000248633 ARIH1Q9Y4X5 557 aaPredicted RBP13.04□□□□□ -0.32
PEX1-201ENST00000248633 TRAV19A0A0A6YYK7 116 aa13.04□□□□□ -0.32
PEX1-201ENST00000248633 H0YAE9 185 aa13.04□□□□□ -0.32
PEX1-201ENST00000248633 GJB3O75712 270 aa13.04□□□□□ -0.32
PEX1-201ENST00000248633 LCKP06239 509 aa13.04□□□□□ -0.32
PEX1-201ENST00000248633 MLLT6P55198 1093 aaPredicted RBP13.04□□□□□ -0.32
PEX1-201ENST00000248633 MCCD1P59942 119 aaPredicted RBP13.04□□□□□ -0.32
PEX1-201ENST00000248633 CDC42P60953 191 aa13.04□□□□□ -0.32
PEX1-201ENST00000248633 RPS24P62847 133 aaKnown RBP13.04□□□□□ -0.32
PEX1-201ENST00000248633 TIMM50Q3ZCQ8 353 aa13.04□□□□□ -0.32
PEX1-201ENST00000248633 CYP27C1Q4G0S4 372 aa13.04□□□□□ -0.32
PEX1-201ENST00000248633 ZNF697Q5TEC3 545 aa13.04□□□□□ -0.32
PEX1-201ENST00000248633 ARL14EPQ8N8R7 260 aaPredicted RBP13.04□□□□□ -0.32
PEX1-201ENST00000248633 MFSD2AQ8NA29 543 aa13.04□□□□□ -0.32
PEX1-201ENST00000248633 ZNF461Q8TAF7 563 aa13.04□□□□□ -0.32
PEX1-201ENST00000248633 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.04□□□□□ -0.32
PEX1-201ENST00000248633 AIG1Q9NVV5 245 aa13.04□□□□□ -0.32
PEX1-201ENST00000248633 ACTL7AQ9Y615 435 aa13.04□□□□□ -0.32
PEX1-201ENST00000248633 HTR7P34969 479 aa13.03□□□□□ -0.32
PEX1-201ENST00000248633 OR4F3Q6IEY1 312 aa13.03□□□□□ -0.32
PEX1-201ENST00000248633 DNAJB7Q7Z6W7 309 aaPredicted RBP13.03□□□□□ -0.32
PEX1-201ENST00000248633 EPHX4Q8IUS5 362 aa13.03□□□□□ -0.32
PEX1-201ENST00000248633 BBS7Q8IWZ6 715 aa13.03□□□□□ -0.32
PEX1-201ENST00000248633 C7orf57Q8NEG2 295 aa13.03□□□□□ -0.32
PEX1-201ENST00000248633 SMIM14Q96QK8 99 aa13.03□□□□□ -0.32
PEX1-201ENST00000248633 NUSAP1Q9BXS6 441 aaKnown RBP13.03□□□□□ -0.32
PEX1-201ENST00000248633 RBM38Q9H0Z9 239 aaKnown RBP13.03□□□□□ -0.32
PEX1-201ENST00000248633 CRISPLD1Q9H336 500 aa13.03□□□□□ -0.32
PEX1-201ENST00000248633 MOSPD1Q9UJG1 213 aa13.03□□□□□ -0.32
PEX1-201ENST00000248633 ZNF646O15015 1829 aaPredicted RBP13.03□□□□□ -0.32
PEX1-201ENST00000248633 CCL16O15467 120 aa13.03□□□□□ -0.32
PEX1-201ENST00000248633 STC1P52823 247 aa13.03□□□□□ -0.32
PEX1-201ENST00000248633 SRP54P61011 504 aaKnown RBP13.03□□□□□ -0.32
PEX1-201ENST00000248633 CD83Q01151 205 aa13.03□□□□□ -0.32
PEX1-201ENST00000248633 NDUFA5Q16718 116 aa13.03□□□□□ -0.32
PEX1-201ENST00000248633 POM121L1PQ3SYA9 428 aa13.03□□□□□ -0.32
PEX1-201ENST00000248633 USP39Q53GS9 565 aaKnown RBP13.03□□□□□ -0.32
PEX1-201ENST00000248633 NEK5Q6P3R8 708 aa13.03□□□□□ -0.32
PEX1-201ENST00000248633 RAB43Q86YS6 212 aa13.03□□□□□ -0.32
PEX1-201ENST00000248633 KIAA1191Q96A73 305 aa13.03□□□□□ -0.32
PEX1-201ENST00000248633 TCF25Q9BQ70 676 aa13.03□□□□□ -0.32
PEX1-201ENST00000248633 SDR39U1Q9NRG7 319 aaPredicted RBP13.03□□□□□ -0.32
PEX1-201ENST00000248633 ZIM2Q9NZV7 527 aa13.03□□□□□ -0.32
PEX1-201ENST00000248633 TNFRSF11BO00300 401 aa13.03□□□□□ -0.32
PEX1-201ENST00000248633 FFAR2O15552 330 aa13.03□□□□□ -0.32
PEX1-201ENST00000248633 STK16O75716 305 aa13.03□□□□□ -0.32
PEX1-201ENST00000248633 CSF2P04141 144 aa13.03□□□□□ -0.32
PEX1-201ENST00000248633 SOD2P04179 222 aa13.03□□□□□ -0.32
PEX1-201ENST00000248633 RCVRNP35243 200 aa13.03□□□□□ -0.32
PEX1-201ENST00000248633 RPS14P62263 151 aaKnown RBP13.03□□□□□ -0.32
PEX1-201ENST00000248633 FOXM1Q08050 763 aa13.03□□□□□ -0.32
PEX1-201ENST00000248633 SELPLGQ14242 412 aa13.03□□□□□ -0.32
PEX1-201ENST00000248633 UBE2UQ5VVX9 321 aa13.03□□□□□ -0.32
PEX1-201ENST00000248633 TPGS2Q68CL5 300 aa13.03□□□□□ -0.32
PEX1-201ENST00000248633 TRIM48Q8IWZ4 208 aa13.03□□□□□ -0.32
PEX1-201ENST00000248633 IL4I1Q96RQ9 567 aa13.03□□□□□ -0.32
PEX1-201ENST00000248633 MTERF1Q99551 399 aaKnown RBP13.03□□□□□ -0.32
PEX1-201ENST00000248633 TRPC4Q9UBN4 977 aa13.03□□□□□ -0.32
PEX1-201ENST00000248633 SNX6Q9UNH7 406 aa13.03□□□□□ -0.32
PEX1-201ENST00000248633 SAGE2PA6NJ88 616 aa13.02□□□□□ -0.32
PEX1-201ENST00000248633 NOTOA8MTQ0 251 aa13.02□□□□□ -0.32
PEX1-201ENST00000248633 HNRNPCL2B2RXH8 293 aa13.02□□□□□ -0.32
PEX1-201ENST00000248633 AP2A2O94973 939 aa13.02□□□□□ -0.32
PEX1-201ENST00000248633 PRAMEF1O95521 474 aa13.02□□□□□ -0.32
PEX1-201ENST00000248633 VIPP01282 170 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms