RNA–Protein interactions for RNA: ENST00000242994.3

NEUROD4-201, Transcript of neuronal differentiation 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEUROD4, Length 3,953 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4-201ENST00000242994 DSC3Q14574 896 aa7.23□□□□□ -1.25
NEUROD4-201ENST00000242994 RAB39AQ14964 217 aa7.23□□□□□ -1.25
NEUROD4-201ENST00000242994 SF1Q15637 639 aaKnown RBP7.23□□□□□ -1.25
NEUROD4-201ENST00000242994 KLHL12Q53G59 568 aa7.23□□□□□ -1.25
NEUROD4-201ENST00000242994 CLLU1OSQ5K130 101 aa7.23□□□□□ -1.25
NEUROD4-201ENST00000242994 GPRC6AQ5T6X5 926 aa7.23□□□□□ -1.25
NEUROD4-201ENST00000242994 RETREG3Q86VR2 466 aa7.23□□□□□ -1.25
NEUROD4-201ENST00000242994 OOSP2Q86WS3 158 aa7.23□□□□□ -1.25
NEUROD4-201ENST00000242994 APCDD1Q8J025 514 aa7.23□□□□□ -1.25
NEUROD4-201ENST00000242994 C7orf57Q8NEG2 295 aa7.23□□□□□ -1.25
NEUROD4-201ENST00000242994 TOP1MTQ969P6 601 aa7.23□□□□□ -1.25
NEUROD4-201ENST00000242994 PGAP3Q96FM1 320 aaPredicted RBP7.23□□□□□ -1.25
NEUROD4-201ENST00000242994 MAGEB10Q96LZ2 347 aaPredicted RBP7.23□□□□□ -1.25
NEUROD4-201ENST00000242994 FERD3LQ96RJ6 166 aa7.23□□□□□ -1.25
NEUROD4-201ENST00000242994 HEPHQ9BQS7 1158 aa7.23□□□□□ -1.25
NEUROD4-201ENST00000242994 FNDC11Q9BVV2 318 aa7.23□□□□□ -1.25
NEUROD4-201ENST00000242994 MIR1-1HGQ9H1L0 117 aa7.23□□□□□ -1.25
NEUROD4-201ENST00000242994 MRM3Q9HC36 420 aaKnown RBP7.23□□□□□ -1.25
NEUROD4-201ENST00000242994 MAGEE1Q9HCI5 957 aa7.23□□□□□ -1.25
NEUROD4-201ENST00000242994 ITM2CQ9NQX7 267 aa7.23□□□□□ -1.25
NEUROD4-201ENST00000242994 AIG1Q9NVV5 245 aa7.23□□□□□ -1.25
NEUROD4-201ENST00000242994 RNF186Q9NXI6 227 aa7.23□□□□□ -1.25
NEUROD4-201ENST00000242994 FBXO10Q9UK96 956 aa7.23□□□□□ -1.25
NEUROD4-201ENST00000242994 FZD4Q9ULV1 537 aa7.23□□□□□ -1.25
NEUROD4-201ENST00000242994 COQ6Q9Y2Z9 468 aa7.23□□□□□ -1.25
NEUROD4-201ENST00000242994 CAB39Q9Y376 341 aaPredicted RBP7.23□□□□□ -1.25
NEUROD4-201ENST00000242994 Q9Y3F1 56 aa7.23□□□□□ -1.25
NEUROD4-201ENST00000242994 USP3Q9Y6I4 520 aa7.23□□□□□ -1.25
NEUROD4-201ENST00000242994 LOC100130705A0A1B0GUX0 176 aa7.23□□□□□ -1.25
NEUROD4-201ENST00000242994 TMEM88BA6NKF7 163 aa7.23□□□□□ -1.25
NEUROD4-201ENST00000242994 PRR23D1E9PI22 279 aaPredicted RBP7.23□□□□□ -1.25
NEUROD4-201ENST00000242994 LOC110117498-PIK3R3F6TDL0 507 aa7.23□□□□□ -1.25
NEUROD4-201ENST00000242994 MUSKO15146 869 aa7.23□□□□□ -1.25
NEUROD4-201ENST00000242994 TLL1O43897 1013 aa7.23□□□□□ -1.25
NEUROD4-201ENST00000242994 SNX4O95219 450 aa7.23□□□□□ -1.25
NEUROD4-201ENST00000242994 PCCBP05166 539 aa7.23□□□□□ -1.25
NEUROD4-201ENST00000242994 PRR23D2P0DMB1 279 aaPredicted RBP7.23□□□□□ -1.25
NEUROD4-201ENST00000242994 HLA-EP13747 358 aa7.23□□□□□ -1.25
NEUROD4-201ENST00000242994 IL12AP29459 219 aa7.23□□□□□ -1.25
NEUROD4-201ENST00000242994 HNF1BP35680 557 aa7.23□□□□□ -1.25
NEUROD4-201ENST00000242994 SLC26A3P40879 764 aa7.23□□□□□ -1.25
NEUROD4-201ENST00000242994 GSTM5P46439 218 aa7.23□□□□□ -1.25
NEUROD4-201ENST00000242994 PSMD8P48556 350 aa7.23□□□□□ -1.25
NEUROD4-201ENST00000242994 ALDH3A2P51648 485 aa7.23□□□□□ -1.25
NEUROD4-201ENST00000242994 UGT2B15P54855 530 aa7.23□□□□□ -1.25
NEUROD4-201ENST00000242994 SRP54P61011 504 aaKnown RBP7.23□□□□□ -1.25
NEUROD4-201ENST00000242994 VBP1P61758 197 aa7.23□□□□□ -1.25
NEUROD4-201ENST00000242994 SLBPQ14493 270 aaKnown RBP eCLIP7.23□□□□□ -1.25
NEUROD4-201ENST00000242994 TIMM50Q3ZCQ8 353 aa7.23□□□□□ -1.25
NEUROD4-201ENST00000242994 ANXA8L1Q5VT79 327 aa7.23□□□□□ -1.25
NEUROD4-201ENST00000242994 MED27Q6P2C8 311 aa7.23□□□□□ -1.25
NEUROD4-201ENST00000242994 FAM171BQ6P995 826 aa7.23□□□□□ -1.25
NEUROD4-201ENST00000242994 DPY19L3Q6ZPD9 716 aa7.23□□□□□ -1.25
NEUROD4-201ENST00000242994 PHYKPLQ8IUZ5 450 aa7.23□□□□□ -1.25
NEUROD4-201ENST00000242994 DEPDC4Q8N2C3 294 aa7.23□□□□□ -1.25
NEUROD4-201ENST00000242994 SLC22A17Q8WUG5 538 aa7.23□□□□□ -1.25
NEUROD4-201ENST00000242994 NUDT8Q8WV74 236 aa7.23□□□□□ -1.25
NEUROD4-201ENST00000242994 GPATCH1Q9BRR8 931 aaKnown RBP7.23□□□□□ -1.25
NEUROD4-201ENST00000242994 NDEL1Q9GZM8 345 aa7.23□□□□□ -1.25
NEUROD4-201ENST00000242994 MTG2Q9H4K7 406 aa7.23□□□□□ -1.25
NEUROD4-201ENST00000242994 SEMA3GQ9NS98 782 aa7.23□□□□□ -1.25
NEUROD4-201ENST00000242994 PCDH10Q9P2E7 1040 aa7.23□□□□□ -1.25
NEUROD4-201ENST00000242994 DEC1Q9P2X7 70 aa7.23□□□□□ -1.25
NEUROD4-201ENST00000242994 DHRS7Q9Y394 339 aa7.23□□□□□ -1.25
NEUROD4-201ENST00000242994 PCDHGA11Q9Y5H2 935 aa7.23□□□□□ -1.25
NEUROD4-201ENST00000242994 SHANK3Q9BYB0 1731 aa7.23□□□□□ -1.25
NEUROD4-201ENST00000242994 KRT87PA6NCN2 255 aa7.22□□□□□ -1.25
NEUROD4-201ENST00000242994 ZNF840PA6NDX5 716 aa7.22□□□□□ -1.25
NEUROD4-201ENST00000242994 M0QX08 132 aa7.22□□□□□ -1.25
NEUROD4-201ENST00000242994 TAF4O00268 1085 aa7.22□□□□□ -1.25
NEUROD4-201ENST00000242994 ERN1O75460 977 aaKnown RBP7.22□□□□□ -1.25
NEUROD4-201ENST00000242994 SOX14O95416 240 aa7.22□□□□□ -1.25
NEUROD4-201ENST00000242994 IFNW1P05000 195 aa7.22□□□□□ -1.25
NEUROD4-201ENST00000242994 ALPPL2P10696 532 aa7.22□□□□□ -1.25
NEUROD4-201ENST00000242994 HPGDP15428 266 aa7.22□□□□□ -1.25
NEUROD4-201ENST00000242994 ITGA2P17301 1181 aa7.22□□□□□ -1.25
NEUROD4-201ENST00000242994 RFC2P35250 354 aa7.22□□□□□ -1.25
NEUROD4-201ENST00000242994 ARCN1P48444 511 aaKnown RBP7.22□□□□□ -1.25
NEUROD4-201ENST00000242994 RPS3AP61247 264 aaKnown RBP7.22□□□□□ -1.25
NEUROD4-201ENST00000242994 CSNK2BP67870 215 aa7.22□□□□□ -1.25
NEUROD4-201ENST00000242994 PTSQ03393 145 aa7.22□□□□□ -1.25
NEUROD4-201ENST00000242994 EMX2Q04743 252 aa7.22□□□□□ -1.25
NEUROD4-201ENST00000242994 DNASE1L3Q13609 305 aa7.22□□□□□ -1.25
NEUROD4-201ENST00000242994 KCTD11Q693B1 232 aa7.22□□□□□ -1.25
NEUROD4-201ENST00000242994 DSG4Q86SJ6 1040 aa7.22□□□□□ -1.25
NEUROD4-201ENST00000242994 NXPE1Q8N323 547 aa7.22□□□□□ -1.25
NEUROD4-201ENST00000242994 OR5K1Q8NHB7 308 aa7.22□□□□□ -1.25
NEUROD4-201ENST00000242994 RHEBL1Q8TAI7 183 aa7.22□□□□□ -1.25
NEUROD4-201ENST00000242994 TAMM41Q96BW9 452 aa7.22□□□□□ -1.25
NEUROD4-201ENST00000242994 COX4I2Q96KJ9 171 aa7.22□□□□□ -1.25
NEUROD4-201ENST00000242994 KCNS3Q9BQ31 491 aa7.22□□□□□ -1.25
NEUROD4-201ENST00000242994 TPT1P8Q9HAU6 139 aa7.22□□□□□ -1.25
NEUROD4-201ENST00000242994 CCNB1IP1Q9NPC3 277 aa7.22□□□□□ -1.25
NEUROD4-201ENST00000242994 RAD18Q9NS91 495 aa7.22□□□□□ -1.25
NEUROD4-201ENST00000242994 ZDHHC3Q9NYG2 299 aa7.22□□□□□ -1.25
NEUROD4-201ENST00000242994 SRRDQ9UH36 339 aa7.22□□□□□ -1.25
NEUROD4-201ENST00000242994 PLAGL1Q9UM63 463 aa7.22□□□□□ -1.25
NEUROD4-201ENST00000242994 RUVBL1Q9Y265 456 aaKnown RBP7.22□□□□□ -1.25
NEUROD4-201ENST00000242994 SLC45A1Q9Y2W3 748 aa7.22□□□□□ -1.25
NEUROD4-201ENST00000242994 H3BNH8 94 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms