RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 ADAM15Q13444 863 aa22.59■■□□□ 1.21
MSX2-201ENST00000239243 GRHL2Q6ISB3 625 aa22.59■■□□□ 1.21
MSX2-201ENST00000239243 DLEU7Q6UYE1 221 aa22.59■■□□□ 1.21
MSX2-201ENST00000239243 LILRA2Q8N149 483 aa22.59■■□□□ 1.21
MSX2-201ENST00000239243 DNAJB8Q8NHS0 232 aa22.59■■□□□ 1.21
MSX2-201ENST00000239243 COX14Q96I36 57 aa22.59■■□□□ 1.21
MSX2-201ENST00000239243 NR1H4Q96RI1 486 aaPredicted RBP22.59■■□□□ 1.21
MSX2-201ENST00000239243 VCXQ9H320 206 aa22.59■■□□□ 1.21
MSX2-201ENST00000239243 SNX13Q9Y5W8 968 aa22.59■■□□□ 1.21
MSX2-201ENST00000239243 PRAMEF4O60810 478 aa22.59■■□□□ 1.21
MSX2-201ENST00000239243 RNASEH2AO75792 299 aaKnown RBP22.59■■□□□ 1.21
MSX2-201ENST00000239243 POP7O75817 140 aaKnown RBP22.59■■□□□ 1.21
MSX2-201ENST00000239243 CAPNS1P04632 268 aa22.59■■□□□ 1.21
MSX2-201ENST00000239243 ATP6V1B2P21281 511 aa22.59■■□□□ 1.21
MSX2-201ENST00000239243 NEK2P51955 445 aa22.59■■□□□ 1.21
MSX2-201ENST00000239243 DGKQP52824 942 aa22.59■■□□□ 1.21
MSX2-201ENST00000239243 CLDN8P56748 225 aa22.59■■□□□ 1.21
MSX2-201ENST00000239243 BLMHQ13867 455 aa22.59■■□□□ 1.21
MSX2-201ENST00000239243 FAM174BQ3ZCQ3 159 aa22.59■■□□□ 1.21
MSX2-201ENST00000239243 PRAMEF9Q5VWM5 478 aa22.59■■□□□ 1.21
MSX2-201ENST00000239243 SUSD1Q6UWL2 747 aa22.59■■□□□ 1.21
MSX2-201ENST00000239243 MTSS1LQ765P7 747 aa22.59■■□□□ 1.21
MSX2-201ENST00000239243 TRMT11Q7Z4G4 463 aaKnown RBP22.59■■□□□ 1.21
MSX2-201ENST00000239243 OR8J3Q8NGG0 315 aa22.59■■□□□ 1.21
MSX2-201ENST00000239243 CGREF1Q99674 301 aa22.59■■□□□ 1.21
MSX2-201ENST00000239243 ARMC1Q9NVT9 282 aa22.59■■□□□ 1.21
MSX2-201ENST00000239243 SLAMF8Q9P0V8 285 aa22.59■■□□□ 1.21
MSX2-201ENST00000239243 KCNE2Q9Y6J6 123 aa22.59■■□□□ 1.21
MSX2-201ENST00000239243 MGAT4DA6NG13 374 aa22.58■■□□□ 1.21
MSX2-201ENST00000239243 MID1O15344 667 aa22.58■■□□□ 1.21
MSX2-201ENST00000239243 HSD3B1P14060 373 aa22.58■■□□□ 1.21
MSX2-201ENST00000239243 HSD3B2P26439 372 aa22.58■■□□□ 1.21
MSX2-201ENST00000239243 HTR1EP28566 365 aa22.58■■□□□ 1.21
MSX2-201ENST00000239243 AQP4P55087 323 aa22.58■■□□□ 1.21
MSX2-201ENST00000239243 MAPKAPK3Q16644 382 aa22.58■■□□□ 1.21
MSX2-201ENST00000239243 CCSMST1Q4G0I0 132 aa22.58■■□□□ 1.21
MSX2-201ENST00000239243 AGBL4Q5VU57 503 aa22.58■■□□□ 1.21
MSX2-201ENST00000239243 PNCKQ6P2M8 343 aa22.58■■□□□ 1.21
MSX2-201ENST00000239243 ZNF547Q8IVP9 402 aa22.58■■□□□ 1.21
MSX2-201ENST00000239243 TMEM102Q8N9M5 508 aaPredicted RBP22.58■■□□□ 1.21
MSX2-201ENST00000239243 CSGALNACT1Q8TDX6 532 aa22.58■■□□□ 1.21
MSX2-201ENST00000239243 METTL2AQ96IZ6 378 aaKnown RBP22.58■■□□□ 1.21
MSX2-201ENST00000239243 S1PR5Q9H228 398 aa22.58■■□□□ 1.21
MSX2-201ENST00000239243 ITM2CQ9NQX7 267 aa22.58■■□□□ 1.21
MSX2-201ENST00000239243 LAMA3Q16787 3333 aa22.58■■□□□ 1.2
MSX2-201ENST00000239243 E7EQ34 232 aa22.58■■□□□ 1.2
MSX2-201ENST00000239243 H0YIV9 168 aa22.58■■□□□ 1.2
MSX2-201ENST00000239243 ARPC2O15144 300 aa22.58■■□□□ 1.2
MSX2-201ENST00000239243 PGRP06401 933 aa22.58■■□□□ 1.2
MSX2-201ENST00000239243 PNLIPRP1P54315 467 aa22.58■■□□□ 1.2
MSX2-201ENST00000239243 RPA4Q13156 261 aa22.58■■□□□ 1.2
MSX2-201ENST00000239243 DOC2AQ14183 400 aa22.58■■□□□ 1.2
MSX2-201ENST00000239243 CAPN13Q6MZZ7 669 aaPredicted RBP22.58■■□□□ 1.2
MSX2-201ENST00000239243 UHRF1Q96T88 793 aaPredicted RBP22.58■■□□□ 1.2
MSX2-201ENST00000239243 EGFL7Q9UHF1 273 aa22.58■■□□□ 1.2
MSX2-201ENST00000239243 UQCRBP14927 111 aa22.57■■□□□ 1.2
MSX2-201ENST00000239243 AGERQ15109 404 aa22.57■■□□□ 1.2
MSX2-201ENST00000239243 CRTC3Q6UUV7 619 aa22.57■■□□□ 1.2
MSX2-201ENST00000239243 UNC5DQ6UXZ4 953 aa22.57■■□□□ 1.2
MSX2-201ENST00000239243 AADATQ8N5Z0 425 aa22.57■■□□□ 1.2
MSX2-201ENST00000239243 WDR20Q8TBZ3 569 aa22.57■■□□□ 1.2
MSX2-201ENST00000239243 FOXJ1Q92949 421 aa22.57■■□□□ 1.2
MSX2-201ENST00000239243 CLEC1BQ9P126 229 aa22.57■■□□□ 1.2
MSX2-201ENST00000239243 GMPR2Q9P2T1 348 aaKnown RBP22.57■■□□□ 1.2
MSX2-201ENST00000239243 CNOT11Q9UKZ1 510 aaKnown RBP22.57■■□□□ 1.2
MSX2-201ENST00000239243 PCDHGA11Q9Y5H2 935 aa22.57■■□□□ 1.2
MSX2-201ENST00000239243 KANSL1LA0AUZ9 987 aa22.57■■□□□ 1.2
MSX2-201ENST00000239243 PCDH8O95206 1070 aa22.57■■□□□ 1.2
MSX2-201ENST00000239243 PSMA4P25789 261 aaKnown RBP22.57■■□□□ 1.2
MSX2-201ENST00000239243 WASP42768 502 aa22.57■■□□□ 1.2
MSX2-201ENST00000239243 MTHFRP42898 656 aa22.57■■□□□ 1.2
MSX2-201ENST00000239243 SLC44A4Q53GD3 710 aa22.57■■□□□ 1.2
MSX2-201ENST00000239243 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP22.57■■□□□ 1.2
MSX2-201ENST00000239243 HEATR4Q86WZ0 1026 aa22.57■■□□□ 1.2
MSX2-201ENST00000239243 PROSER1Q86XN7 944 aa22.57■■□□□ 1.2
MSX2-201ENST00000239243 SLCO4A1Q96BD0 722 aa22.57■■□□□ 1.2
MSX2-201ENST00000239243 SH3GL1Q99961 368 aa22.57■■□□□ 1.2
MSX2-201ENST00000239243 BRF2Q9HAW0 419 aa22.57■■□□□ 1.2
MSX2-201ENST00000239243 CCM2LQ9NUG4 571 aaPredicted RBP22.57■■□□□ 1.2
MSX2-201ENST00000239243 AP3M1Q9Y2T2 418 aa22.57■■□□□ 1.2
MSX2-201ENST00000239243 CKAP5Q14008 2032 aa22.56■■□□□ 1.2
MSX2-201ENST00000239243 DHRS12A0PJE2 317 aa22.56■■□□□ 1.2
MSX2-201ENST00000239243 ANTXRLA6NF34 631 aa22.56■■□□□ 1.2
MSX2-201ENST00000239243 IGLON5A6NGN9 336 aa22.56■■□□□ 1.2
MSX2-201ENST00000239243 GPIP06744 558 aa22.56■■□□□ 1.2
MSX2-201ENST00000239243 AMD1P17707 334 aa22.56■■□□□ 1.2
MSX2-201ENST00000239243 YBX1P67809 324 aaKnown RBP22.56■■□□□ 1.2
MSX2-201ENST00000239243 FXNQ16595 210 aa22.56■■□□□ 1.2
MSX2-201ENST00000239243 SPANXN4Q5MJ08 99 aa22.56■■□□□ 1.2
MSX2-201ENST00000239243 IFNEQ86WN2 208 aa22.56■■□□□ 1.2
MSX2-201ENST00000239243 TICAM1Q8IUC6 712 aa22.56■■□□□ 1.2
MSX2-201ENST00000239243 SYTL1Q8IYJ3 562 aa22.56■■□□□ 1.2
MSX2-201ENST00000239243 HDDC3Q8N4P3 179 aa22.56■■□□□ 1.2
MSX2-201ENST00000239243 PLA2G15Q8NCC3 412 aa22.56■■□□□ 1.2
MSX2-201ENST00000239243 OR9A1PQ8NGU1 263 aa22.56■■□□□ 1.2
MSX2-201ENST00000239243 ZNF480Q8WV37 535 aa22.56■■□□□ 1.2
MSX2-201ENST00000239243 GTF2H4Q92759 462 aa22.56■■□□□ 1.2
MSX2-201ENST00000239243 ERLEC1Q96DZ1 483 aa22.56■■□□□ 1.2
MSX2-201ENST00000239243 PPM1MQ96MI6 270 aa22.56■■□□□ 1.2
MSX2-201ENST00000239243 TMEM74Q96NL1 305 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms