RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 AADACL4Q5VUY2 407 aa12.96□□□□□ -0.34
NEK9-201ENST00000238616 KCTD9Q7L273 389 aa12.96□□□□□ -0.34
NEK9-201ENST00000238616 ZNF649Q9BS31 505 aa12.96□□□□□ -0.34
NEK9-201ENST00000238616 FBXL12Q9NXK8 326 aa12.96□□□□□ -0.34
NEK9-201ENST00000238616 TVP23BQ9NYZ1 205 aa12.96□□□□□ -0.34
NEK9-201ENST00000238616 INSIG1O15503 277 aa12.95□□□□□ -0.34
NEK9-201ENST00000238616 RNF13O43567 381 aa12.95□□□□□ -0.34
NEK9-201ENST00000238616 ACP5P13686 325 aa12.95□□□□□ -0.34
NEK9-201ENST00000238616 PPM1JQ5JR12 505 aa12.95□□□□□ -0.34
NEK9-201ENST00000238616 TMPPEQ6ZT21 453 aa12.95□□□□□ -0.34
NEK9-201ENST00000238616 IL22RA1Q8N6P7 574 aa12.95□□□□□ -0.34
NEK9-201ENST00000238616 PKP4Q99569 1192 aa12.95□□□□□ -0.34
NEK9-201ENST00000238616 AP1M2Q9Y6Q5 423 aa12.95□□□□□ -0.34
NEK9-201ENST00000238616 GOT2P00505 430 aaKnown RBP12.95□□□□□ -0.34
NEK9-201ENST00000238616 OGNP20774 298 aaKnown RBP12.95□□□□□ -0.34
NEK9-201ENST00000238616 XKRXQ6PP77 449 aa12.95□□□□□ -0.34
NEK9-201ENST00000238616 SLC24A5Q71RS6 500 aa12.95□□□□□ -0.34
NEK9-201ENST00000238616 NIPA1Q7RTP0 329 aa12.95□□□□□ -0.34
NEK9-201ENST00000238616 GLIS3Q8NEA6 775 aa12.95□□□□□ -0.34
NEK9-201ENST00000238616 EZH1Q92800 747 aaPredicted RBP12.95□□□□□ -0.34
NEK9-201ENST00000238616 BCAS3Q9H6U6 928 aa12.95□□□□□ -0.34
NEK9-201ENST00000238616 SLCO1B3Q9NPD5 702 aa12.95□□□□□ -0.34
NEK9-201ENST00000238616 PLAGL1Q9UM63 463 aa12.95□□□□□ -0.34
NEK9-201ENST00000238616 PPRC1Q5VV67 1664 aaKnown RBP12.95□□□□□ -0.34
NEK9-201ENST00000238616 A0A1W2PRU2 124 aa12.95□□□□□ -0.34
NEK9-201ENST00000238616 FABP12A6NFH5 140 aa12.95□□□□□ -0.34
NEK9-201ENST00000238616 ADRB2P07550 413 aa12.95□□□□□ -0.34
NEK9-201ENST00000238616 OR5J2Q8NH18 312 aa12.95□□□□□ -0.34
NEK9-201ENST00000238616 SPATA22Q8NHS9 363 aa12.95□□□□□ -0.34
NEK9-201ENST00000238616 FAM83DQ9H4H8 585 aa12.95□□□□□ -0.34
NEK9-201ENST00000238616 RNPEPL1Q9HAU8 725 aa12.95□□□□□ -0.34
NEK9-201ENST00000238616 LAMP5Q9UJQ1 280 aa12.95□□□□□ -0.34
NEK9-201ENST00000238616 HCN2Q9UL51 889 aa12.95□□□□□ -0.34
NEK9-201ENST00000238616 GRXCR1A8MXD5 290 aa12.95□□□□□ -0.34
NEK9-201ENST00000238616 HEXBP07686 556 aa12.95□□□□□ -0.34
NEK9-201ENST00000238616 PHOSPHO1Q8TCT1 267 aa12.95□□□□□ -0.34
NEK9-201ENST00000238616 TRPM4Q8TD43 1214 aa12.95□□□□□ -0.34
NEK9-201ENST00000238616 CDK15Q96Q40 435 aa12.95□□□□□ -0.34
NEK9-201ENST00000238616 CH25HO95992 272 aa12.95□□□□□ -0.34
NEK9-201ENST00000238616 MAGEA3P43357 314 aa12.95□□□□□ -0.34
NEK9-201ENST00000238616 BRMS1LQ5PSV4 323 aa12.95□□□□□ -0.34
NEK9-201ENST00000238616 REP15Q6BDI9 236 aa12.95□□□□□ -0.34
NEK9-201ENST00000238616 DPY19L4Q7Z388 723 aa12.95□□□□□ -0.34
NEK9-201ENST00000238616 MREGQ8N565 214 aa12.95□□□□□ -0.34
NEK9-201ENST00000238616 TM9SF2Q99805 663 aa12.95□□□□□ -0.34
NEK9-201ENST00000238616 HOPXQ9BPY8 73 aaPredicted RBP12.95□□□□□ -0.34
NEK9-201ENST00000238616 RBCK1Q9BYM8 510 aa12.95□□□□□ -0.34
NEK9-201ENST00000238616 GTF2IRD1Q9UHL9 959 aa12.95□□□□□ -0.34
NEK9-201ENST00000238616 PCDHGC3Q9UN70 934 aa12.95□□□□□ -0.34
NEK9-201ENST00000238616 WASF3Q9UPY6 502 aa12.95□□□□□ -0.34
NEK9-201ENST00000238616 KIF1AQ12756 1690 aa12.95□□□□□ -0.34
NEK9-201ENST00000238616 NWD1Q149M9 1564 aa12.95□□□□□ -0.34
NEK9-201ENST00000238616 IFNA21P01568 189 aa12.95□□□□□ -0.34
NEK9-201ENST00000238616 HERV-K104P61576 105 aa12.95□□□□□ -0.34
NEK9-201ENST00000238616 GRIK5Q16478 980 aa12.95□□□□□ -0.34
NEK9-201ENST00000238616 FRMD7Q6ZUT3 714 aa12.95□□□□□ -0.34
NEK9-201ENST00000238616 MAP4K3Q8IVH8 894 aa12.95□□□□□ -0.34
NEK9-201ENST00000238616 GSTCDQ8NEC7 633 aa12.95□□□□□ -0.34
NEK9-201ENST00000238616 FEM1AQ9BSK4 669 aa12.95□□□□□ -0.34
NEK9-201ENST00000238616 WDR55Q9H6Y2 383 aaPredicted RBP12.95□□□□□ -0.34
NEK9-201ENST00000238616 MKKSQ9NPJ1 570 aaPredicted RBP12.95□□□□□ -0.34
NEK9-201ENST00000238616 ARHGEF4Q9NR80 690 aa12.95□□□□□ -0.34
NEK9-201ENST00000238616 TTC24A2A3L6 582 aaPredicted RBP12.94□□□□□ -0.34
NEK9-201ENST00000238616 C8AP07357 584 aa12.94□□□□□ -0.34
NEK9-201ENST00000238616 ATF6P18850 670 aa12.94□□□□□ -0.34
NEK9-201ENST00000238616 PLEKHG6Q3KR16 790 aa12.94□□□□□ -0.34
NEK9-201ENST00000238616 ARCQ7LC44 396 aa12.94□□□□□ -0.34
NEK9-201ENST00000238616 EPS8L1Q8TE68 723 aa12.94□□□□□ -0.34
NEK9-201ENST00000238616 PNPLA2Q96AD5 504 aa12.94□□□□□ -0.34
NEK9-201ENST00000238616 SHDQ96IW2 340 aa12.94□□□□□ -0.34
NEK9-201ENST00000238616 GBA3Q9H227 469 aa12.94□□□□□ -0.34
NEK9-201ENST00000238616 PCDHGB7Q9Y5F8 929 aa12.94□□□□□ -0.34
NEK9-201ENST00000238616 APC2O95996 2303 aa12.94□□□□□ -0.34
NEK9-201ENST00000238616 H3BQF6 201 aa12.94□□□□□ -0.34
NEK9-201ENST00000238616 LGR5O75473 907 aa12.94□□□□□ -0.34
NEK9-201ENST00000238616 PLATP00750 562 aa12.94□□□□□ -0.34
NEK9-201ENST00000238616 FMO3P31513 532 aa12.94□□□□□ -0.34
NEK9-201ENST00000238616 SNU13P55769 128 aaKnown RBP12.94□□□□□ -0.34
NEK9-201ENST00000238616 PDK4Q16654 411 aa12.94□□□□□ -0.34
NEK9-201ENST00000238616 OR2T34Q8NGX1 318 aa12.94□□□□□ -0.34
NEK9-201ENST00000238616 OR2T3Q8NH03 318 aa12.94□□□□□ -0.34
NEK9-201ENST00000238616 KLHL15Q96M94 604 aa12.94□□□□□ -0.34
NEK9-201ENST00000238616 FARSBQ9NSD9 589 aaKnown RBP12.94□□□□□ -0.34
NEK9-201ENST00000238616 ASB18Q6ZVZ8 466 aa12.94□□□□□ -0.34
NEK9-201ENST00000238616 PDPRQ8NCN5 879 aa12.94□□□□□ -0.34
NEK9-201ENST00000238616 C16orf58Q96GQ5 468 aa12.94□□□□□ -0.34
NEK9-201ENST00000238616 PADI3Q9ULW8 664 aa12.94□□□□□ -0.34
NEK9-201ENST00000238616 ADAM18Q9Y3Q7 739 aa12.94□□□□□ -0.34
NEK9-201ENST00000238616 C9IYK1 514 aa12.94□□□□□ -0.34
NEK9-201ENST00000238616 TOR1BO14657 336 aa12.94□□□□□ -0.34
NEK9-201ENST00000238616 GJA9P57773 515 aa12.94□□□□□ -0.34
NEK9-201ENST00000238616 SNTA1Q13424 505 aa12.94□□□□□ -0.34
NEK9-201ENST00000238616 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.94□□□□□ -0.346e-7■■■■□ 22.6
NEK9-201ENST00000238616 RBM48Q5RL73 367 aaKnown RBP12.94□□□□□ -0.34
NEK9-201ENST00000238616 POTEHQ6S545 545 aa12.94□□□□□ -0.34
NEK9-201ENST00000238616 KIAA1143Q96AT1 154 aaPredicted RBP12.94□□□□□ -0.34
NEK9-201ENST00000238616 SH3YL1Q96HL8 342 aaPredicted RBP12.94□□□□□ -0.34
NEK9-201ENST00000238616 EIF2B4Q9UI10 523 aaKnown RBP12.94□□□□□ -0.34
NEK9-201ENST00000238616 NAV1Q8NEY1 1877 aa12.94□□□□□ -0.34
NEK9-201ENST00000238616 XKP51811 444 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms