RNA–Protein interactions for RNA: ENST00000233575.6

SNX17-201, Transcript of sorting nexin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX17, Length 2,044 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-201ENST00000233575 POLG2Q9UHN1 485 aa18.02■□□□□ 0.48
SNX17-201ENST00000233575 ARHGEF17Q96PE2 2063 aaPredicted RBP18.02■□□□□ 0.47
SNX17-201ENST00000233575 TRBV23OR9-2A0A075B6M9 112 aa18.01■□□□□ 0.47
SNX17-201ENST00000233575 DCXO43602 365 aa18.01■□□□□ 0.47
SNX17-201ENST00000233575 TNFP01375 233 aa18.01■□□□□ 0.47
SNX17-201ENST00000233575 T-ENOLP0DO92 83 aa18.01■□□□□ 0.47
SNX17-201ENST00000233575 CD22P20273 847 aa18.01■□□□□ 0.47
SNX17-201ENST00000233575 CD38P28907 300 aa18.01■□□□□ 0.47
SNX17-201ENST00000233575 ABRAXAS2Q15018 415 aa18.01■□□□□ 0.47
SNX17-201ENST00000233575 CPSF6Q16630 551 aaKnown RBP eCLIP18.01■□□□□ 0.47
SNX17-201ENST00000233575 SFTPA2Q8IWL1 248 aa18.01■□□□□ 0.47
SNX17-201ENST00000233575 C1orf216Q8TAB5 229 aa18.01■□□□□ 0.47
SNX17-201ENST00000233575 ACTRT2Q8TDY3 377 aa18.01■□□□□ 0.47
SNX17-201ENST00000233575 TM9SF3Q9HD45 589 aa18.01■□□□□ 0.47
SNX17-201ENST00000233575 TRPS1Q9UHF7 1281 aa18.01■□□□□ 0.47
SNX17-201ENST00000233575 STK38LQ9Y2H1 464 aa18.01■□□□□ 0.47
SNX17-201ENST00000233575 ZDBF2Q9HCK1 2354 aa18.01■□□□□ 0.47
SNX17-201ENST00000233575 CAPN14A8MX76 684 aa18.01■□□□□ 0.47
SNX17-201ENST00000233575 RPN2P04844 631 aa18.01■□□□□ 0.47
SNX17-201ENST00000233575 TDGF1P13385 188 aa18.01■□□□□ 0.47
SNX17-201ENST00000233575 HMOX2P30519 316 aa18.01■□□□□ 0.47
SNX17-201ENST00000233575 MAGEA9P43362 315 aa18.01■□□□□ 0.47
SNX17-201ENST00000233575 YBX1P67809 324 aaKnown RBP18.01■□□□□ 0.47
SNX17-201ENST00000233575 CHIT1Q13231 466 aa18.01■□□□□ 0.47
SNX17-201ENST00000233575 SRSF5Q13243 272 aaKnown RBP18.01■□□□□ 0.47
SNX17-201ENST00000233575 CAPN13Q6MZZ7 669 aaPredicted RBP18.01■□□□□ 0.47
SNX17-201ENST00000233575 IL27RAQ6UWB1 636 aa18.01■□□□□ 0.47
SNX17-201ENST00000233575 ABRAXAS1Q6UWZ7 409 aa18.01■□□□□ 0.47
SNX17-201ENST00000233575 SLC36A4Q6YBV0 504 aa18.01■□□□□ 0.47
SNX17-201ENST00000233575 MFSD2AQ8NA29 543 aa18.01■□□□□ 0.47
SNX17-201ENST00000233575 CEP70Q8NHQ1 597 aa18.01■□□□□ 0.47
SNX17-201ENST00000233575 STON2Q8WXE9 905 aa18.01■□□□□ 0.47
SNX17-201ENST00000233575 SGPP1Q9BX95 441 aa18.01■□□□□ 0.47
SNX17-201ENST00000233575 XKR8Q9H6D3 395 aa18.01■□□□□ 0.47
SNX17-201ENST00000233575 PRMT8Q9NR22 394 aaPredicted RBP18.01■□□□□ 0.47
SNX17-201ENST00000233575 ATXN2Q99700 1313 aaKnown RBP18.01■□□□□ 0.47
SNX17-201ENST00000233575 THADAQ6YHU6 1953 aa18■□□□□ 0.47
SNX17-201ENST00000233575 KCNE1BA0A087WTH5 132 aa18■□□□□ 0.47
SNX17-201ENST00000233575 A6NCN8 305 aa18■□□□□ 0.47
SNX17-201ENST00000233575 WFS1O76024 890 aa18■□□□□ 0.47
SNX17-201ENST00000233575 ENO1P06733 434 aaKnown RBP18■□□□□ 0.47
SNX17-201ENST00000233575 ERGP11308 486 aa18■□□□□ 0.47
SNX17-201ENST00000233575 MTHFD1P11586 935 aaKnown RBP18■□□□□ 0.47
SNX17-201ENST00000233575 NPPBP16860 134 aa18■□□□□ 0.47
SNX17-201ENST00000233575 HALP42357 657 aa18■□□□□ 0.47
SNX17-201ENST00000233575 RACK1P63244 317 aaKnown RBP18■□□□□ 0.47
SNX17-201ENST00000233575 C1orf61Q13536 156 aa18■□□□□ 0.47
SNX17-201ENST00000233575 XKR7Q5GH72 579 aa18■□□□□ 0.47
SNX17-201ENST00000233575 PARGQ86W56 976 aa18■□□□□ 0.47
SNX17-201ENST00000233575 MAML2Q8IZL2 1156 aaPredicted RBP18■□□□□ 0.47
SNX17-201ENST00000233575 GBP7Q8N8V2 638 aaPredicted RBP18■□□□□ 0.47
SNX17-201ENST00000233575 NEIL2Q969S2 332 aa18■□□□□ 0.47
SNX17-201ENST00000233575 CAMK1GQ96NX5 476 aa18■□□□□ 0.47
SNX17-201ENST00000233575 ZNF624Q9P2J8 865 aaPredicted RBP18■□□□□ 0.47
SNX17-201ENST00000233575 SLC12A4Q9UP95 1085 aa18■□□□□ 0.47
SNX17-201ENST00000233575 SPAG17Q6Q759 2223 aa18■□□□□ 0.47
SNX17-201ENST00000233575 CHEK2O96017 543 aa17.99■□□□□ 0.47
SNX17-201ENST00000233575 ILF3Q12906 894 aaKnown RBP eCLIP17.99■□□□□ 0.47
SNX17-201ENST00000233575 LACTB2Q53H82 288 aaPredicted RBP17.99■□□□□ 0.47
SNX17-201ENST00000233575 SGO1Q5FBB7 561 aa17.99■□□□□ 0.47
SNX17-201ENST00000233575 METTL21CQ5VZV1 264 aa17.99■□□□□ 0.47
SNX17-201ENST00000233575 PHACTR4Q8IZ21 702 aa17.99■□□□□ 0.47
SNX17-201ENST00000233575 RGL4Q8IZJ4 473 aa17.99■□□□□ 0.47
SNX17-201ENST00000233575 LINC01555Q8NAE3 123 aa17.99■□□□□ 0.47
SNX17-201ENST00000233575 GPBAR1Q8TDU6 330 aa17.99■□□□□ 0.47
SNX17-201ENST00000233575 PATE1Q8WXA2 126 aa17.99■□□□□ 0.47
SNX17-201ENST00000233575 JPH3Q8WXH2 748 aaPredicted RBP17.99■□□□□ 0.47
SNX17-201ENST00000233575 TUBGCP3Q96CW5 907 aa17.99■□□□□ 0.47
SNX17-201ENST00000233575 MTFMTQ96DP5 389 aaKnown RBP17.99■□□□□ 0.47
SNX17-201ENST00000233575 ZNF385DQ9H6B1 395 aa17.99■□□□□ 0.47
SNX17-201ENST00000233575 CCDC177Q9NQR7 707 aaPredicted RBP17.99■□□□□ 0.47
SNX17-201ENST00000233575 WDFY4Q6ZS81 3184 aa17.99■□□□□ 0.47
SNX17-201ENST00000233575 VPS13AQ96RL7 3174 aa17.99■□□□□ 0.47
SNX17-201ENST00000233575 ALDOCP09972 364 aaKnown RBP17.99■□□□□ 0.47
SNX17-201ENST00000233575 VARSP26640 1264 aaKnown RBP17.99■□□□□ 0.47
SNX17-201ENST00000233575 IRF8Q02556 426 aa17.99■□□□□ 0.47
SNX17-201ENST00000233575 DOC2AQ14183 400 aa17.99■□□□□ 0.47
SNX17-201ENST00000233575 KRT33BQ14525 404 aa17.99■□□□□ 0.47
SNX17-201ENST00000233575 XKR6Q5GH73 641 aa17.99■□□□□ 0.47
SNX17-201ENST00000233575 CATSPEREQ5SY80 951 aa17.99■□□□□ 0.47
SNX17-201ENST00000233575 FAM91A1Q658Y4 838 aa17.99■□□□□ 0.47
SNX17-201ENST00000233575 WASH2PQ6VEQ5 465 aa17.99■□□□□ 0.47
SNX17-201ENST00000233575 Q6ZSR9 355 aa17.99■□□□□ 0.47
SNX17-201ENST00000233575 L3MBTL4Q8NA19 623 aa17.99■□□□□ 0.47
SNX17-201ENST00000233575 OR52E1Q8NGJ3 308 aa17.99■□□□□ 0.47
SNX17-201ENST00000233575 ACAT2Q9BWD1 397 aa17.99■□□□□ 0.47
SNX17-201ENST00000233575 WASH6PQ9NQA3 447 aa17.99■□□□□ 0.47
SNX17-201ENST00000233575 PCOLCE2Q9UKZ9 415 aa17.99■□□□□ 0.47
SNX17-201ENST00000233575 TRIM33Q9UPN9 1127 aa17.99■□□□□ 0.47
SNX17-201ENST00000233575 TMEM221A6NGB7 291 aa17.98■□□□□ 0.47
SNX17-201ENST00000233575 M0R296 226 aa17.98■□□□□ 0.47
SNX17-201ENST00000233575 TLR4O00206 839 aa17.98■□□□□ 0.47
SNX17-201ENST00000233575 MANBAO00462 879 aa17.98■□□□□ 0.47
SNX17-201ENST00000233575 PEX11AO75192 247 aa17.98■□□□□ 0.47
SNX17-201ENST00000233575 PSMB5P28074 263 aa17.98■□□□□ 0.47
SNX17-201ENST00000233575 HOXA6P31267 233 aa17.98■□□□□ 0.47
SNX17-201ENST00000233575 NEK2P51955 445 aa17.98■□□□□ 0.47
SNX17-201ENST00000233575 PCM1Q15154 2024 aa17.98■□□□□ 0.47
SNX17-201ENST00000233575 CYP2A13Q16696 494 aa17.98■□□□□ 0.47
SNX17-201ENST00000233575 GGTA1PQ4G0N0 100 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms