RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 GABBR2O75899 941 aa13.42□□□□□ -0.26
NFKB1-201ENST00000226574 PENKP01210 267 aaPredicted RBP13.42□□□□□ -0.26
NFKB1-201ENST00000226574 BMP2P12643 396 aa13.42□□□□□ -0.26
NFKB1-201ENST00000226574 HLCSP50747 726 aa13.42□□□□□ -0.26
NFKB1-201ENST00000226574 PLA2G16P53816 162 aa13.42□□□□□ -0.26
NFKB1-201ENST00000226574 CD83Q01151 205 aa13.42□□□□□ -0.26
NFKB1-201ENST00000226574 ATP6AP1Q15904 470 aa13.42□□□□□ -0.26
NFKB1-201ENST00000226574 CXorf57Q6NSI4 855 aaKnown RBP13.42□□□□□ -0.26
NFKB1-201ENST00000226574 PAQR9Q6ZVX9 377 aa13.42□□□□□ -0.26
NFKB1-201ENST00000226574 USP30Q70CQ3 517 aa13.42□□□□□ -0.26
NFKB1-201ENST00000226574 MTSS1LQ765P7 747 aa13.42□□□□□ -0.26
NFKB1-201ENST00000226574 ANKFN1Q8N957 763 aa13.42□□□□□ -0.26
NFKB1-201ENST00000226574 FBXO22Q8NEZ5 403 aa13.42□□□□□ -0.26
NFKB1-201ENST00000226574 ABHD11Q8NFV4 315 aa13.42□□□□□ -0.26
NFKB1-201ENST00000226574 SCLYQ96I15 445 aa13.42□□□□□ -0.26
NFKB1-201ENST00000226574 PYURFQ96I23 114 aa13.42□□□□□ -0.26
NFKB1-201ENST00000226574 HSH2DQ96JZ2 352 aa13.42□□□□□ -0.26
NFKB1-201ENST00000226574 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.42□□□□□ -0.26
NFKB1-201ENST00000226574 FAM83DQ9H4H8 585 aa13.42□□□□□ -0.26
NFKB1-201ENST00000226574 PRDM8Q9NQV8 689 aa13.42□□□□□ -0.26
NFKB1-201ENST00000226574 VAPAQ9P0L0 249 aa13.42□□□□□ -0.26
NFKB1-201ENST00000226574 ADAMTS5Q9UNA0 930 aa13.42□□□□□ -0.26
NFKB1-201ENST00000226574 A0A0U1RQF3 1178 aa13.42□□□□□ -0.26
NFKB1-201ENST00000226574 SLC22A1O15245 554 aa13.42□□□□□ -0.26
NFKB1-201ENST00000226574 TPD52L2O43399 206 aaKnown RBP13.42□□□□□ -0.26
NFKB1-201ENST00000226574 ERN1O75460 977 aaKnown RBP13.42□□□□□ -0.26
NFKB1-201ENST00000226574 GADD45GO95257 159 aa13.42□□□□□ -0.26
NFKB1-201ENST00000226574 IFNW1P05000 195 aa13.42□□□□□ -0.26
NFKB1-201ENST00000226574 ELFN1P0C7U0 828 aa13.42□□□□□ -0.26
NFKB1-201ENST00000226574 FBXW4P57775 412 aa13.42□□□□□ -0.26
NFKB1-201ENST00000226574 TUBB3Q13509 450 aa13.42□□□□□ -0.26
NFKB1-201ENST00000226574 IL18Q14116 193 aa13.42□□□□□ -0.26
NFKB1-201ENST00000226574 ZBTB6Q15916 424 aa13.42□□□□□ -0.26
NFKB1-201ENST00000226574 CYP4V2Q6ZWL3 525 aaPredicted RBP13.42□□□□□ -0.26
NFKB1-201ENST00000226574 ITIH5Q86UX2 942 aa13.42□□□□□ -0.26
NFKB1-201ENST00000226574 ATL1Q8WXF7 558 aa13.42□□□□□ -0.26
NFKB1-201ENST00000226574 LGALS12Q96DT0 336 aa13.42□□□□□ -0.26
NFKB1-201ENST00000226574 PAWRQ96IZ0 340 aaKnown RBP13.42□□□□□ -0.26
NFKB1-201ENST00000226574 BOCQ9BWV1 1114 aa13.42□□□□□ -0.26
NFKB1-201ENST00000226574 SEMA3GQ9NS98 782 aa13.42□□□□□ -0.26
NFKB1-201ENST00000226574 OLAHQ9NV23 265 aa13.42□□□□□ -0.26
NFKB1-201ENST00000226574 FAM118AQ9NWS6 357 aa13.42□□□□□ -0.26
NFKB1-201ENST00000226574 ALS2Q96Q42 1657 aa13.42□□□□□ -0.26
NFKB1-201ENST00000226574 EVPLQ92817 2033 aa13.42□□□□□ -0.26
NFKB1-201ENST00000226574 SLC38A8A6NNN8 435 aa13.41□□□□□ -0.26
NFKB1-201ENST00000226574 RPLP0P05388 317 aaKnown RBP13.41□□□□□ -0.26
NFKB1-201ENST00000226574 MEF2AQ02078 507 aaPredicted RBP13.41□□□□□ -0.26
NFKB1-201ENST00000226574 EMX2Q04743 252 aa13.41□□□□□ -0.26
NFKB1-201ENST00000226574 SF1Q15637 639 aaKnown RBP13.41□□□□□ -0.26
NFKB1-201ENST00000226574 CLEC12AQ5QGZ9 265 aa13.41□□□□□ -0.26
NFKB1-201ENST00000226574 ZNF648Q5T619 568 aaPredicted RBP13.41□□□□□ -0.26
NFKB1-201ENST00000226574 LETMD1Q6P1Q0 360 aa13.41□□□□□ -0.26
NFKB1-201ENST00000226574 TMEM126BQ8IUX1 230 aa13.41□□□□□ -0.26
NFKB1-201ENST00000226574 FAM217AQ8IXS0 508 aa13.41□□□□□ -0.26
NFKB1-201ENST00000226574 IZUMO1Q8IYV9 350 aa13.41□□□□□ -0.26
NFKB1-201ENST00000226574 GLB1L3Q8NCI6 653 aaPredicted RBP13.41□□□□□ -0.26
NFKB1-201ENST00000226574 ZNF599Q96NL3 588 aa13.41□□□□□ -0.26
NFKB1-201ENST00000226574 SEZ6LQ9BYH1 1024 aa13.41□□□□□ -0.26
NFKB1-201ENST00000226574 TPT1P8Q9HAU6 139 aa13.41□□□□□ -0.26
NFKB1-201ENST00000226574 PCDHGA8Q9Y5G5 932 aa13.41□□□□□ -0.26
NFKB1-201ENST00000226574 N6AMT1Q9Y5N5 214 aa13.41□□□□□ -0.26
NFKB1-201ENST00000226574 CFAP20Q9Y6A4 193 aaKnown RBP13.41□□□□□ -0.26
NFKB1-201ENST00000226574 N4BP2Q86UW6 1770 aaPredicted RBP13.41□□□□□ -0.26
NFKB1-201ENST00000226574 FADS2P1A8MWK0 482 aa13.41□□□□□ -0.26
NFKB1-201ENST00000226574 GPX3P22352 226 aa13.41□□□□□ -0.26
NFKB1-201ENST00000226574 RXRGP48443 463 aa13.41□□□□□ -0.26
NFKB1-201ENST00000226574 ARHGAP15Q53QZ3 475 aa13.41□□□□□ -0.26
NFKB1-201ENST00000226574 ATAD3BQ5T9A4 648 aa13.41□□□□□ -0.26
NFKB1-201ENST00000226574 C11orf88Q6PI97 169 aa13.41□□□□□ -0.26
NFKB1-201ENST00000226574 RNF111Q6ZNA4 994 aa13.41□□□□□ -0.26
NFKB1-201ENST00000226574 SH2D5Q6ZV89 423 aa13.41□□□□□ -0.26
NFKB1-201ENST00000226574 LARP4Q71RC2 724 aaKnown RBP eCLIP13.41□□□□□ -0.26
NFKB1-201ENST00000226574 YAF2Q8IY57 180 aa13.41□□□□□ -0.26
NFKB1-201ENST00000226574 CYP4Z2PQ8N1L4 340 aa13.41□□□□□ -0.26
NFKB1-201ENST00000226574 BEND7Q8N7W2 519 aaPredicted RBP13.41□□□□□ -0.26
NFKB1-201ENST00000226574 DTX3Q8N9I9 347 aa13.41□□□□□ -0.26
NFKB1-201ENST00000226574 SCAMP4Q969E2 229 aa13.41□□□□□ -0.26
NFKB1-201ENST00000226574 ENOPH1Q9UHY7 261 aa13.41□□□□□ -0.26
NFKB1-201ENST00000226574 GOLGB1Q14789 3259 aaKnown RBP13.41□□□□□ -0.26
NFKB1-201ENST00000226574 LCKP06239 509 aa13.41□□□□□ -0.26
NFKB1-201ENST00000226574 C8BP07358 591 aa13.41□□□□□ -0.26
NFKB1-201ENST00000226574 PRPS2P11908 318 aa13.41□□□□□ -0.26
NFKB1-201ENST00000226574 CKMT1AP12532 417 aa13.41□□□□□ -0.26
NFKB1-201ENST00000226574 WASP42768 502 aa13.41□□□□□ -0.26
NFKB1-201ENST00000226574 OR2B6P58173 313 aa13.41□□□□□ -0.26
NFKB1-201ENST00000226574 OLR1P78380 273 aa13.41□□□□□ -0.26
NFKB1-201ENST00000226574 RAPSNQ13702 412 aa13.41□□□□□ -0.26
NFKB1-201ENST00000226574 TSTQ16762 297 aaKnown RBP13.41□□□□□ -0.26
NFKB1-201ENST00000226574 C5orf22Q49AR2 442 aa13.41□□□□□ -0.26
NFKB1-201ENST00000226574 FRG2Q64ET8 278 aa13.41□□□□□ -0.26
NFKB1-201ENST00000226574 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.41□□□□□ -0.26
NFKB1-201ENST00000226574 SLC7A5P1Q8MH63 180 aa13.41□□□□□ -0.26
NFKB1-201ENST00000226574 TMEM102Q8N9M5 508 aaPredicted RBP13.41□□□□□ -0.26
NFKB1-201ENST00000226574 FLCNQ8NFG4 579 aa13.41□□□□□ -0.26
NFKB1-201ENST00000226574 FUBP1Q96AE4 644 aaKnown RBP13.41□□□□□ -0.26
NFKB1-201ENST00000226574 SUSD3Q96L08 255 aa13.41□□□□□ -0.26
NFKB1-201ENST00000226574 FRG2BQ96QU4 278 aa13.41□□□□□ -0.26
NFKB1-201ENST00000226574 ABCB8Q9NUT2 735 aa13.41□□□□□ -0.26
NFKB1-201ENST00000226574 COL4A1P02462 1669 aa13.41□□□□□ -0.26
NFKB1-201ENST00000226574 NINQ8N4C6 2090 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms