RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 PSMG1O95456 288 aa13.42□□□□□ -0.26
SIX4-201ENST00000216513 CYP17A1P05093 508 aa13.42□□□□□ -0.26
SIX4-201ENST00000216513 MPIP34949 423 aa13.42□□□□□ -0.26
SIX4-201ENST00000216513 TRIM71Q2Q1W2 868 aaKnown RBP13.42□□□□□ -0.26
SIX4-201ENST00000216513 PTCHD1Q96NR3 888 aa13.42□□□□□ -0.26
SIX4-201ENST00000216513 CEP44Q9C0F1 390 aa13.42□□□□□ -0.26
SIX4-201ENST00000216513 SLITRK2Q9H156 845 aa13.42□□□□□ -0.26
SIX4-201ENST00000216513 ZNF624Q9P2J8 865 aaPredicted RBP13.42□□□□□ -0.26
SIX4-201ENST00000216513 MAU2Q9Y6X3 613 aa13.42□□□□□ -0.26
SIX4-201ENST00000216513 DYTNA2CJ06 578 aa13.42□□□□□ -0.26
SIX4-201ENST00000216513 SQLEQ14534 574 aa13.42□□□□□ -0.26
SIX4-201ENST00000216513 PERM1Q5SV97 790 aa13.42□□□□□ -0.26
SIX4-201ENST00000216513 NUP54Q7Z3B4 507 aa13.42□□□□□ -0.26
SIX4-201ENST00000216513 NUDT13Q86X67 352 aa13.42□□□□□ -0.26
SIX4-201ENST00000216513 GLYATL1Q969I3 302 aa13.42□□□□□ -0.26
SIX4-201ENST00000216513 C1orf74Q96LT6 269 aa13.42□□□□□ -0.26
SIX4-201ENST00000216513 DUSP23Q9BVJ7 150 aa13.42□□□□□ -0.26
SIX4-201ENST00000216513 SLC22A14Q9Y267 594 aa13.42□□□□□ -0.26
SIX4-201ENST00000216513 C15orf38-AP3S2A0A0A6YYH1 394 aa13.42□□□□□ -0.26
SIX4-201ENST00000216513 EGFP01133 1207 aa13.42□□□□□ -0.26
SIX4-201ENST00000216513 ALPPP05187 535 aa13.42□□□□□ -0.26
SIX4-201ENST00000216513 PNLIPRP1P54315 467 aa13.42□□□□□ -0.26
SIX4-201ENST00000216513 RAD23AP54725 363 aa13.42□□□□□ -0.26
SIX4-201ENST00000216513 RGS8P57771 180 aaPredicted RBP13.42□□□□□ -0.26
SIX4-201ENST00000216513 PITX1P78337 314 aaPredicted RBP13.42□□□□□ -0.26
SIX4-201ENST00000216513 MRPS21P82921 87 aaKnown RBP13.42□□□□□ -0.26
SIX4-201ENST00000216513 C11orf88Q6PI97 169 aa13.42□□□□□ -0.26
SIX4-201ENST00000216513 ARPINQ7Z6K5 226 aa13.42□□□□□ -0.26
SIX4-201ENST00000216513 GPR149Q86SP6 731 aa13.42□□□□□ -0.26
SIX4-201ENST00000216513 PLEKHO2Q8TD55 490 aa13.42□□□□□ -0.26
SIX4-201ENST00000216513 CMKLR1Q99788 373 aa13.42□□□□□ -0.26
SIX4-201ENST00000216513 CA5BQ9Y2D0 317 aa13.42□□□□□ -0.26
SIX4-201ENST00000216513 RBM7Q9Y580 266 aaKnown RBP13.42□□□□□ -0.26
SIX4-201ENST00000216513 SOCS5O75159 536 aa13.42□□□□□ -0.26
SIX4-201ENST00000216513 LDLRP01130 860 aa13.42□□□□□ -0.26
SIX4-201ENST00000216513 C8orf89P0DMQ9 161 aa13.42□□□□□ -0.26
SIX4-201ENST00000216513 ACADSP16219 412 aa13.42□□□□□ -0.26
SIX4-201ENST00000216513 MYL12AP19105 171 aa13.42□□□□□ -0.26
SIX4-201ENST00000216513 KIR3DL1P43629 444 aa13.42□□□□□ -0.26
SIX4-201ENST00000216513 CDKN1CP49918 316 aaPredicted RBP13.42□□□□□ -0.26
SIX4-201ENST00000216513 PGGT1BP53609 377 aa13.42□□□□□ -0.26
SIX4-201ENST00000216513 MRPS35P82673 323 aaKnown RBP13.42□□□□□ -0.26
SIX4-201ENST00000216513 DDHD1Q8NEL9 900 aa13.42□□□□□ -0.26
SIX4-201ENST00000216513 FAR1Q8WVX9 515 aa13.42□□□□□ -0.26
SIX4-201ENST00000216513 ARRDC3Q96B67 414 aa13.42□□□□□ -0.26
SIX4-201ENST00000216513 TBC1D10AQ9BXI6 508 aa13.42□□□□□ -0.26
SIX4-201ENST00000216513 FOXQ1Q9C009 403 aa13.42□□□□□ -0.26
SIX4-201ENST00000216513 RPS6KA6Q9UK32 745 aa13.42□□□□□ -0.26
SIX4-201ENST00000216513 SPATA2Q9UM82 520 aa13.42□□□□□ -0.26
SIX4-201ENST00000216513 P2RY2P41231 377 aa13.42□□□□□ -0.26
SIX4-201ENST00000216513 COX10Q12887 443 aa13.42□□□□□ -0.26
SIX4-201ENST00000216513 PAQR3Q6TCH7 311 aa13.42□□□□□ -0.26
SIX4-201ENST00000216513 SPPL2CQ8IUH8 684 aa13.42□□□□□ -0.26
SIX4-201ENST00000216513 C3orf58Q8NDZ4 430 aa13.42□□□□□ -0.26
SIX4-201ENST00000216513 DNAJA3Q96EY1 480 aa13.42□□□□□ -0.26
SIX4-201ENST00000216513 MUTYHQ9UIF7 546 aa13.42□□□□□ -0.26
SIX4-201ENST00000216513 POU2F3Q9UKI9 436 aa13.42□□□□□ -0.26
SIX4-201ENST00000216513 COLQQ9Y215 455 aaPredicted RBP13.42□□□□□ -0.26
SIX4-201ENST00000216513 GABRDO14764 452 aa13.41□□□□□ -0.26
SIX4-201ENST00000216513 SLC22A3O75751 556 aa13.41□□□□□ -0.26
SIX4-201ENST00000216513 METTL18O95568 372 aa13.41□□□□□ -0.26
SIX4-201ENST00000216513 PRG2P13727 222 aa13.41□□□□□ -0.26
SIX4-201ENST00000216513 GRIA1P42261 906 aa13.41□□□□□ -0.26
SIX4-201ENST00000216513 RPTNQ6XPR3 784 aa13.41□□□□□ -0.26
SIX4-201ENST00000216513 MBOAT1Q6ZNC8 495 aa13.41□□□□□ -0.26
SIX4-201ENST00000216513 TLX3O43711 291 aaPredicted RBP13.41□□□□□ -0.26
SIX4-201ENST00000216513 GRIN2CQ14957 1233 aa13.41□□□□□ -0.26
SIX4-201ENST00000216513 ZBTB6Q15916 424 aa13.41□□□□□ -0.26
SIX4-201ENST00000216513 SAMD14Q8IZD0 417 aaPredicted RBP13.41□□□□□ -0.26
SIX4-201ENST00000216513 CACTIN-AS1Q8N1I8 211 aa13.41□□□□□ -0.26
SIX4-201ENST00000216513 CKAP2Q8WWK9 683 aa13.41□□□□□ -0.26
SIX4-201ENST00000216513 SH3GL2Q99962 352 aa13.41□□□□□ -0.26
SIX4-201ENST00000216513 SLAMF7Q9NQ25 335 aa13.41□□□□□ -0.26
SIX4-201ENST00000216513 PAK6Q9NQU5 681 aaPredicted RBP13.41□□□□□ -0.26
SIX4-201ENST00000216513 SLC39A1Q9NY26 324 aa13.41□□□□□ -0.26
SIX4-201ENST00000216513 SLC2A6Q9UGQ3 507 aa13.41□□□□□ -0.26
SIX4-201ENST00000216513 POU2F1P14859 743 aa13.41□□□□□ -0.26
SIX4-201ENST00000216513 OR4D2P58180 307 aa13.41□□□□□ -0.26
SIX4-201ENST00000216513 TIGD2Q4W5G0 525 aa13.41□□□□□ -0.26
SIX4-201ENST00000216513 TXNRD3NBQ6F5E7 133 aa13.41□□□□□ -0.26
SIX4-201ENST00000216513 ZNF730Q6ZMV8 503 aa13.41□□□□□ -0.26
SIX4-201ENST00000216513 THOC6Q86W42 341 aaKnown RBP13.41□□□□□ -0.26
SIX4-201ENST00000216513 NLGN4XQ8N0W4 816 aa13.41□□□□□ -0.26
SIX4-201ENST00000216513 ARL14Q8N4G2 192 aa13.41□□□□□ -0.26
SIX4-201ENST00000216513 ACMSDQ8TDX5 336 aa13.41□□□□□ -0.26
SIX4-201ENST00000216513 PPM1MQ96MI6 270 aa13.41□□□□□ -0.26
SIX4-201ENST00000216513 CCNL2Q96S94 520 aaPredicted RBP13.41□□□□□ -0.26
SIX4-201ENST00000216513 KCNK13Q9HB14 408 aa13.41□□□□□ -0.26
SIX4-201ENST00000216513 KCNK12Q9HB15 430 aa13.41□□□□□ -0.26
SIX4-201ENST00000216513 SDHAF3Q9NRP4 125 aa13.41□□□□□ -0.26
SIX4-201ENST00000216513 RASSF1Q9NS23 344 aa13.41□□□□□ -0.26
SIX4-201ENST00000216513 TCRBV7S3A2A0A539 114 aa13.41□□□□□ -0.26
SIX4-201ENST00000216513 KLK1P06870 262 aa13.41□□□□□ -0.26
SIX4-201ENST00000216513 SNRPB2P08579 225 aaKnown RBP13.41□□□□□ -0.26
SIX4-201ENST00000216513 CCDC92Q53HC0 331 aaPredicted RBP13.41□□□□□ -0.26
SIX4-201ENST00000216513 LNX2Q8N448 690 aa13.41□□□□□ -0.26
SIX4-201ENST00000216513 NXPE3Q969Y0 559 aa13.41□□□□□ -0.26
SIX4-201ENST00000216513 LAMB4A4D0S4 1761 aa13.41□□□□□ -0.26
SIX4-201ENST00000216513 FAM72CH0Y354 149 aa13.41□□□□□ -0.26
SIX4-201ENST00000216513 HSPA13P48723 471 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms