RNA–Protein interactions for RNA: ENST00000216085.11

RHBDD3-201, Transcript of rhomboid domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDD3, Length 1,794 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-201ENST00000216085 C4orf33Q8N1A6 199 aa19.53■□□□□ 0.72
RHBDD3-201ENST00000216085 GALNT15Q8N3T1 639 aa19.53■□□□□ 0.72
RHBDD3-201ENST00000216085 MED8Q96G25 268 aa19.53■□□□□ 0.72
RHBDD3-201ENST00000216085 GPR78Q96P69 363 aa19.53■□□□□ 0.72
RHBDD3-201ENST00000216085 ATOH8Q96SQ7 321 aa19.53■□□□□ 0.72
RHBDD3-201ENST00000216085 NUDT22Q9BRQ3 303 aa19.53■□□□□ 0.72
RHBDD3-201ENST00000216085 PCBD2Q9H0N5 130 aa19.53■□□□□ 0.72
RHBDD3-201ENST00000216085 WWOXQ9NZC7 414 aa19.53■□□□□ 0.72
RHBDD3-201ENST00000216085 MAP3K7O43318 606 aa19.52■□□□□ 0.72
RHBDD3-201ENST00000216085 SMIM24O75264 130 aa19.52■□□□□ 0.72
RHBDD3-201ENST00000216085 RASSF9O75901 435 aa19.52■□□□□ 0.72
RHBDD3-201ENST00000216085 IPO13O94829 963 aaKnown RBP19.52■□□□□ 0.72
RHBDD3-201ENST00000216085 CCNDBP1O95273 360 aa19.52■□□□□ 0.72
RHBDD3-201ENST00000216085 GFAPP14136 432 aa19.52■□□□□ 0.72
RHBDD3-201ENST00000216085 OAS2P29728 719 aaKnown RBP19.52■□□□□ 0.72
RHBDD3-201ENST00000216085 CRHR1P34998 444 aa19.52■□□□□ 0.72
RHBDD3-201ENST00000216085 SLC18A2Q05940 514 aa19.52■□□□□ 0.72
RHBDD3-201ENST00000216085 NAA25Q14CX7 972 aa19.52■□□□□ 0.72
RHBDD3-201ENST00000216085 HES3Q5TGS1 186 aa19.52■□□□□ 0.72
RHBDD3-201ENST00000216085 CAPN13Q6MZZ7 669 aaPredicted RBP19.52■□□□□ 0.72
RHBDD3-201ENST00000216085 MBOAT1Q6ZNC8 495 aa19.52■□□□□ 0.72
RHBDD3-201ENST00000216085 LINC01555Q8NAE3 123 aa19.52■□□□□ 0.72
RHBDD3-201ENST00000216085 PDPRQ8NCN5 879 aa19.52■□□□□ 0.72
RHBDD3-201ENST00000216085 ADAMTS14Q8WXS8 1223 aa19.52■□□□□ 0.72
RHBDD3-201ENST00000216085 APOPT1Q96IL0 206 aa19.52■□□□□ 0.72
RHBDD3-201ENST00000216085 MKS1Q9NXB0 559 aa19.52■□□□□ 0.72
RHBDD3-201ENST00000216085 AKAP7Q9P0M2 348 aaPredicted RBP19.52■□□□□ 0.72
RHBDD3-201ENST00000216085 POMT2Q9UKY4 750 aa19.52■□□□□ 0.72
RHBDD3-201ENST00000216085 CLCA2Q9UQC9 943 aa19.52■□□□□ 0.72
RHBDD3-201ENST00000216085 UNC13CQ8NB66 2214 aa19.52■□□□□ 0.72
RHBDD3-201ENST00000216085 TLCD2A6NGC4 264 aa19.52■□□□□ 0.71
RHBDD3-201ENST00000216085 E7ENX8 843 aa19.52■□□□□ 0.71
RHBDD3-201ENST00000216085 TOX3O15405 576 aaPredicted RBP19.52■□□□□ 0.71
RHBDD3-201ENST00000216085 C9P02748 559 aa19.52■□□□□ 0.71
RHBDD3-201ENST00000216085 TAC1P20366 129 aa19.52■□□□□ 0.71
RHBDD3-201ENST00000216085 TAP2Q03519 686 aa19.52■□□□□ 0.71
RHBDD3-201ENST00000216085 TRA2AQ13595 282 aaKnown RBP eCLIP19.52■□□□□ 0.71
RHBDD3-201ENST00000216085 CCDC153Q494R4 210 aa19.52■□□□□ 0.71
RHBDD3-201ENST00000216085 SPESP1Q6UW49 350 aa19.52■□□□□ 0.71
RHBDD3-201ENST00000216085 TMPRSS12Q86WS5 348 aa19.52■□□□□ 0.71
RHBDD3-201ENST00000216085 C2orf73Q8N5S3 287 aaPredicted RBP19.52■□□□□ 0.71
RHBDD3-201ENST00000216085 GRAMD1AQ96CP6 724 aa19.52■□□□□ 0.71
RHBDD3-201ENST00000216085 STRADBQ9C0K7 418 aa19.52■□□□□ 0.71
RHBDD3-201ENST00000216085 INTS7Q9NVH2 962 aaKnown RBP19.52■□□□□ 0.71
RHBDD3-201ENST00000216085 ZNF358Q9NW07 568 aa19.52■□□□□ 0.71
RHBDD3-201ENST00000216085 KLHL3Q9UH77 587 aa19.52■□□□□ 0.71
RHBDD3-201ENST00000216085 MID2Q9UJV3 735 aa19.52■□□□□ 0.71
RHBDD3-201ENST00000216085 PCDHB11Q9Y5F2 797 aa19.52■□□□□ 0.71
RHBDD3-201ENST00000216085 ACTL7BQ9Y614 415 aa19.52■□□□□ 0.71
RHBDD3-201ENST00000216085 SPTBN4Q9H254 2564 aa19.51■□□□□ 0.71
RHBDD3-201ENST00000216085 TOP3BO95985 862 aaKnown RBP19.51■□□□□ 0.71
RHBDD3-201ENST00000216085 MT-CO3P00414 261 aa19.51■□□□□ 0.71
RHBDD3-201ENST00000216085 CDH3P22223 829 aa19.51■□□□□ 0.71
RHBDD3-201ENST00000216085 PRDX3P30048 256 aaKnown RBP19.51■□□□□ 0.71
RHBDD3-201ENST00000216085 INHBCP55103 352 aa19.51■□□□□ 0.71
RHBDD3-201ENST00000216085 TBPL1P62380 186 aa19.51■□□□□ 0.71
RHBDD3-201ENST00000216085 SF1Q15637 639 aaKnown RBP19.51■□□□□ 0.71
RHBDD3-201ENST00000216085 SLC5A12Q1EHB4 618 aa19.51■□□□□ 0.71
RHBDD3-201ENST00000216085 PHF19Q5T6S3 580 aa19.51■□□□□ 0.71
RHBDD3-201ENST00000216085 RHBDF1Q96CC6 855 aa19.51■□□□□ 0.71
RHBDD3-201ENST00000216085 ATG10Q9H0Y0 220 aa19.51■□□□□ 0.71
RHBDD3-201ENST00000216085 FOXO6A8MYZ6 492 aa19.5■□□□□ 0.71
RHBDD3-201ENST00000216085 UBXN8O00124 270 aa19.5■□□□□ 0.71
RHBDD3-201ENST00000216085 UGT2B7P16662 529 aa19.5■□□□□ 0.71
RHBDD3-201ENST00000216085 GFERP55789 205 aa19.5■□□□□ 0.71
RHBDD3-201ENST00000216085 NAE1Q13564 534 aa19.5■□□□□ 0.71
RHBDD3-201ENST00000216085 FASTKQ14296 549 aaKnown RBP19.5■□□□□ 0.71
RHBDD3-201ENST00000216085 SNAP47Q5SQN1 464 aa19.5■□□□□ 0.71
RHBDD3-201ENST00000216085 N4BP2L1Q5TBK1 243 aaPredicted RBP19.5■□□□□ 0.71
RHBDD3-201ENST00000216085 CDCP2Q5VXM1 449 aa19.5■□□□□ 0.71
RHBDD3-201ENST00000216085 SUSD1Q6UWL2 747 aa19.5■□□□□ 0.71
RHBDD3-201ENST00000216085 FAM92BQ6ZTR7 304 aa19.5■□□□□ 0.71
RHBDD3-201ENST00000216085 SH2D5Q6ZV89 423 aa19.5■□□□□ 0.71
RHBDD3-201ENST00000216085 PRSS42Q7Z5A4 293 aa19.5■□□□□ 0.71
RHBDD3-201ENST00000216085 FBXO39Q8N4B4 442 aa19.5■□□□□ 0.71
RHBDD3-201ENST00000216085 PPFIBP2Q8ND30 876 aa19.5■□□□□ 0.71
RHBDD3-201ENST00000216085 C1GALT1Q9NS00 363 aa19.5■□□□□ 0.71
RHBDD3-201ENST00000216085 ABCF3Q9NUQ8 709 aa19.5■□□□□ 0.71
RHBDD3-201ENST00000216085 SPHK1Q9NYA1 384 aa19.5■□□□□ 0.71
RHBDD3-201ENST00000216085 TMEM216Q9P0N5 145 aa19.5■□□□□ 0.71
RHBDD3-201ENST00000216085 CPSF2Q9P2I0 782 aaKnown RBP19.5■□□□□ 0.71
RHBDD3-201ENST00000216085 TK2O00142 265 aa19.49■□□□□ 0.71
RHBDD3-201ENST00000216085 THRAP10827 490 aa19.49■□□□□ 0.71
RHBDD3-201ENST00000216085 JUPP14923 745 aa19.49■□□□□ 0.71
RHBDD3-201ENST00000216085 CMPK1P30085 196 aa19.49■□□□□ 0.71
RHBDD3-201ENST00000216085 CCKBRP32239 447 aa19.49■□□□□ 0.71
RHBDD3-201ENST00000216085 ARL4DP49703 201 aa19.49■□□□□ 0.71
RHBDD3-201ENST00000216085 CFHR1Q03591 330 aa19.49■□□□□ 0.71
RHBDD3-201ENST00000216085 CACHD1Q5VU97 1274 aa19.49■□□□□ 0.71
RHBDD3-201ENST00000216085 PRAMEF13Q5VWM6 474 aa19.49■□□□□ 0.71
RHBDD3-201ENST00000216085 CACTIN-AS1Q8N1I8 211 aa19.49■□□□□ 0.71
RHBDD3-201ENST00000216085 CCDC63Q8NA47 563 aa19.49■□□□□ 0.71
RHBDD3-201ENST00000216085 OR56A3Q8NH54 315 aa19.49■□□□□ 0.71
RHBDD3-201ENST00000216085 NRTNQ99748 197 aa19.49■□□□□ 0.71
RHBDD3-201ENST00000216085 MIPEPQ99797 713 aa19.49■□□□□ 0.71
RHBDD3-201ENST00000216085 HAUS8Q9BT25 410 aa19.49■□□□□ 0.71
RHBDD3-201ENST00000216085 TMBIM4Q9HC24 238 aa19.49■□□□□ 0.71
RHBDD3-201ENST00000216085 TAC3Q9UHF0 121 aa19.49■□□□□ 0.71
RHBDD3-201ENST00000216085 IGHV5-10-1A0A0J9YXX1 117 aa19.49■□□□□ 0.71
RHBDD3-201ENST00000216085 A0A0J9YY10 115 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms