RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 CATSPERZQ9NTU4 200 aa15.25■□□□□ 0.03
ERCC1-201ENST00000013807 INTS7Q9NVH2 962 aaKnown RBP15.25■□□□□ 0.03
ERCC1-201ENST00000013807 NDOR1Q9UHB4 597 aa15.25■□□□□ 0.03
ERCC1-201ENST00000013807 ANAPC5Q9UJX4 755 aa15.25■□□□□ 0.03
ERCC1-201ENST00000013807 MRFAP1Q9Y605 127 aa15.25■□□□□ 0.03
ERCC1-201ENST00000013807 SVILO95425 2214 aa15.25■□□□□ 0.03
ERCC1-201ENST00000013807 CACNA1DQ01668 2161 aa15.25■□□□□ 0.03
ERCC1-201ENST00000013807 DIDO1Q9BTC0 2240 aaKnown RBP15.24■□□□□ 0.03
ERCC1-201ENST00000013807 A0A1B0GX78 115 aa15.24■□□□□ 0.03
ERCC1-201ENST00000013807 IQCF5A8MTL0 148 aa15.24■□□□□ 0.03
ERCC1-201ENST00000013807 TCP11X1B4DZS4 312 aa15.24■□□□□ 0.03
ERCC1-201ENST00000013807 PEX12O00623 359 aa15.24■□□□□ 0.03
ERCC1-201ENST00000013807 SRPX2O60687 465 aaPredicted RBP15.24■□□□□ 0.03
ERCC1-201ENST00000013807 IPO13O94829 963 aaKnown RBP15.24■□□□□ 0.03
ERCC1-201ENST00000013807 ALPPP05187 535 aa15.24■□□□□ 0.03
ERCC1-201ENST00000013807 PIM1P11309 404 aaPredicted RBP15.24■□□□□ 0.03
ERCC1-201ENST00000013807 MMP11P24347 488 aa15.24■□□□□ 0.03
ERCC1-201ENST00000013807 NPY2RP49146 381 aa15.24■□□□□ 0.03
ERCC1-201ENST00000013807 PLEKHN1Q494U1 663 aaPredicted RBP15.24■□□□□ 0.03
ERCC1-201ENST00000013807 TCTE1Q5JU00 501 aa15.24■□□□□ 0.03
ERCC1-201ENST00000013807 FCRL6Q6DN72 434 aa15.24■□□□□ 0.03
ERCC1-201ENST00000013807 ZNF662Q6ZS27 426 aa15.24■□□□□ 0.03
ERCC1-201ENST00000013807 PPHLN1Q8NEY8 458 aaKnown RBP15.24■□□□□ 0.03
ERCC1-201ENST00000013807 RAD51AP1Q96B01 352 aa15.24■□□□□ 0.03
ERCC1-201ENST00000013807 IL1RAPL1Q9NZN1 696 aa15.24■□□□□ 0.03
ERCC1-201ENST00000013807 MARCH4Q9P2E8 410 aaPredicted RBP15.24■□□□□ 0.03
ERCC1-201ENST00000013807 B3GNT3Q9Y2A9 372 aa15.24■□□□□ 0.03
ERCC1-201ENST00000013807 WIPF3A6NGB9 483 aa15.23■□□□□ 0.03
ERCC1-201ENST00000013807 C1orf105O95561 183 aa15.23■□□□□ 0.03
ERCC1-201ENST00000013807 ADARP55265 1226 aaKnown RBP15.23■□□□□ 0.03
ERCC1-201ENST00000013807 CDK16Q00536 496 aa15.23■□□□□ 0.03
ERCC1-201ENST00000013807 AIMP2Q13155 320 aaKnown RBP15.23■□□□□ 0.03
ERCC1-201ENST00000013807 GBX1Q14549 363 aa15.23■□□□□ 0.03
ERCC1-201ENST00000013807 TMED2Q15363 201 aa15.23■□□□□ 0.03
ERCC1-201ENST00000013807 FIGLAQ6QHK4 219 aa15.23■□□□□ 0.03
ERCC1-201ENST00000013807 IGFL2Q6UWQ7 119 aa15.23■□□□□ 0.03
ERCC1-201ENST00000013807 PRUNE1Q86TP1 453 aa15.23■□□□□ 0.03
ERCC1-201ENST00000013807 FAM20CQ8IXL6 584 aa15.23■□□□□ 0.03
ERCC1-201ENST00000013807 IQCKQ8N0W5 287 aa15.23■□□□□ 0.03
ERCC1-201ENST00000013807 CCDC89Q8N998 374 aa15.23■□□□□ 0.03
ERCC1-201ENST00000013807 SSC4DQ8WTU2 575 aa15.23■□□□□ 0.03
ERCC1-201ENST00000013807 KIFC1Q9BW19 673 aa15.23■□□□□ 0.03
ERCC1-201ENST00000013807 MRM3Q9HC36 420 aaKnown RBP15.23■□□□□ 0.03
ERCC1-201ENST00000013807 ATP13A2Q9NQ11 1180 aa15.23■□□□□ 0.03
ERCC1-201ENST00000013807 GNPTGQ9UJJ9 305 aa15.23■□□□□ 0.03
ERCC1-201ENST00000013807 GUCA1BQ9UMX6 200 aa15.23■□□□□ 0.03
ERCC1-201ENST00000013807 CRYBG3Q68DQ2 2970 aa15.23■□□□□ 0.03
ERCC1-201ENST00000013807 DSCR3O14972 297 aa15.22■□□□□ 0.03
ERCC1-201ENST00000013807 SEMA7AO75326 666 aa15.22■□□□□ 0.03
ERCC1-201ENST00000013807 AGFG2O95081 481 aa15.22■□□□□ 0.03
ERCC1-201ENST00000013807 MATN4O95460 622 aa15.22■□□□□ 0.03
ERCC1-201ENST00000013807 CBX6O95503 412 aa15.22■□□□□ 0.03
ERCC1-201ENST00000013807 ZSCAN5DPP0CG00 497 aa15.22■□□□□ 0.03
ERCC1-201ENST00000013807 ARNTP27540 789 aa15.22■□□□□ 0.03
ERCC1-201ENST00000013807 CCNFP41002 786 aa15.22■□□□□ 0.03
ERCC1-201ENST00000013807 GRIA3P42263 894 aa15.22■□□□□ 0.03
ERCC1-201ENST00000013807 CSE1LP55060 971 aaKnown RBP15.22■□□□□ 0.03
ERCC1-201ENST00000013807 SNX1Q13596 522 aa15.22■□□□□ 0.03
ERCC1-201ENST00000013807 GRM7Q14831 915 aa15.22■□□□□ 0.03
ERCC1-201ENST00000013807 RPS6KA1Q15418 735 aa15.22■□□□□ 0.03
ERCC1-201ENST00000013807 SF1Q15637 639 aaKnown RBP15.22■□□□□ 0.03
ERCC1-201ENST00000013807 NKG7Q16617 165 aa15.22■□□□□ 0.03
ERCC1-201ENST00000013807 FAM214AQ32MH5 1076 aa15.22■□□□□ 0.03
ERCC1-201ENST00000013807 PRR30Q53SZ7 412 aaPredicted RBP15.22■□□□□ 0.03
ERCC1-201ENST00000013807 TTC23LQ6PF05 361 aa15.22■□□□□ 0.03
ERCC1-201ENST00000013807 Q6ZS92 163 aa15.22■□□□□ 0.03
ERCC1-201ENST00000013807 TTLL10Q6ZVT0 673 aa15.22■□□□□ 0.03
ERCC1-201ENST00000013807 LDB1Q86U70 411 aaPredicted RBP15.22■□□□□ 0.03
ERCC1-201ENST00000013807 KRT222Q8N1A0 295 aa15.22■□□□□ 0.03
ERCC1-201ENST00000013807 SNRNP40Q96DI7 357 aaKnown RBP15.22■□□□□ 0.03
ERCC1-201ENST00000013807 BIRC8Q96P09 236 aa15.22■□□□□ 0.03
ERCC1-201ENST00000013807 TCF12Q99081 682 aa15.22■□□□□ 0.03
ERCC1-201ENST00000013807 SPSB2Q99619 263 aa15.22■□□□□ 0.03
ERCC1-201ENST00000013807 MFRPQ9BY79 579 aa15.22■□□□□ 0.03
ERCC1-201ENST00000013807 SLC29A3Q9BZD2 475 aa15.22■□□□□ 0.03
ERCC1-201ENST00000013807 BFARQ9NZS9 450 aa15.22■□□□□ 0.03
ERCC1-201ENST00000013807 SLC39A10Q9ULF5 831 aa15.22■□□□□ 0.03
ERCC1-201ENST00000013807 KLHL20Q9Y2M5 609 aa15.22■□□□□ 0.03
ERCC1-201ENST00000013807 CELSR2Q9HCU4 2923 aa15.21■□□□□ 0.03
ERCC1-201ENST00000013807 VSTM2BA6NLU5 285 aa15.21■□□□□ 0.03
ERCC1-201ENST00000013807 DDAH2O95865 285 aa15.21■□□□□ 0.03
ERCC1-201ENST00000013807 ALAS2P22557 587 aa15.21■□□□□ 0.03
ERCC1-201ENST00000013807 NMBRP28336 390 aa15.21■□□□□ 0.03
ERCC1-201ENST00000013807 ATP5DP30049 168 aa15.21■□□□□ 0.03
ERCC1-201ENST00000013807 TYSND1Q2T9J0 566 aa15.21■□□□□ 0.03
ERCC1-201ENST00000013807 PTRHD1Q6GMV3 140 aaKnown RBP15.21■□□□□ 0.03
ERCC1-201ENST00000013807 LRRC8BQ6P9F7 803 aa15.21■□□□□ 0.03
ERCC1-201ENST00000013807 COX15Q7KZN9 410 aa15.21■□□□□ 0.03
ERCC1-201ENST00000013807 OTOAQ7RTW8 1153 aa15.21■□□□□ 0.03
ERCC1-201ENST00000013807 TMEM151BQ8IW70 566 aa15.21■□□□□ 0.03
ERCC1-201ENST00000013807 OR2A1Q8NGT9 310 aa15.21■□□□□ 0.03
ERCC1-201ENST00000013807 CFAP61Q8NHU2 1237 aa15.21■□□□□ 0.03
ERCC1-201ENST00000013807 TM9SF4Q92544 642 aa15.21■□□□□ 0.03
ERCC1-201ENST00000013807 IL17FQ96PD4 163 aa15.21■□□□□ 0.03
ERCC1-201ENST00000013807 CUTCQ9NTM9 273 aa15.21■□□□□ 0.03
ERCC1-201ENST00000013807 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.21■□□□□ 0.03
ERCC1-201ENST00000013807 NXT1Q9UKK6 140 aaKnown RBP15.21■□□□□ 0.03
ERCC1-201ENST00000013807 A0A1W2PPV9 198 aa15.2■□□□□ 0.02
ERCC1-201ENST00000013807 SOCS6O14544 535 aa15.2■□□□□ 0.02
ERCC1-201ENST00000013807 CTSVO60911 334 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms