RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 KCNK13Q9HB14 408 aa11.88□□□□□ -0.51
TSPAN9-201ENST00000011898 ZFYVE1Q9HBF4 777 aa11.88□□□□□ -0.51
TSPAN9-201ENST00000011898 FKBPLQ9UIM3 349 aa11.88□□□□□ -0.51
TSPAN9-201ENST00000011898 MYADML2A6NDP7 307 aa11.88□□□□□ -0.51
TSPAN9-201ENST00000011898 TTC34A8MYJ7 566 aa11.88□□□□□ -0.51
TSPAN9-201ENST00000011898 FAM220BPB1ANY3 271 aa11.88□□□□□ -0.51
TSPAN9-201ENST00000011898 ABCB7O75027 752 aa11.88□□□□□ -0.51
TSPAN9-201ENST00000011898 ARHGEF15O94989 841 aa11.88□□□□□ -0.51
TSPAN9-201ENST00000011898 MTHFD1P11586 935 aaKnown RBP11.88□□□□□ -0.51
TSPAN9-201ENST00000011898 ZNF81P51508 661 aa11.88□□□□□ -0.51
TSPAN9-201ENST00000011898 SOX4Q06945 474 aaPredicted RBP11.88□□□□□ -0.51
TSPAN9-201ENST00000011898 RPA4Q13156 261 aa11.88□□□□□ -0.51
TSPAN9-201ENST00000011898 SMCO1Q147U7 214 aa11.88□□□□□ -0.51
TSPAN9-201ENST00000011898 VARS2Q5ST30 1063 aaKnown RBP11.88□□□□□ -0.51
TSPAN9-201ENST00000011898 INTS11Q5TA45 600 aaKnown RBP11.88□□□□□ -0.51
TSPAN9-201ENST00000011898 FAM92BQ6ZTR7 304 aa11.88□□□□□ -0.51
TSPAN9-201ENST00000011898 FIBCD1Q8N539 461 aa11.88□□□□□ -0.51
TSPAN9-201ENST00000011898 TXNDC5Q8NBS9 432 aaKnown RBP11.88□□□□□ -0.51
TSPAN9-201ENST00000011898 CGREF1Q99674 301 aa11.88□□□□□ -0.51
TSPAN9-201ENST00000011898 MAGEH1Q9H213 219 aa11.88□□□□□ -0.51
TSPAN9-201ENST00000011898 ZDHHC6Q9H6R6 413 aa11.88□□□□□ -0.51
TSPAN9-201ENST00000011898 GTF2IRD1Q9UHL9 959 aa11.88□□□□□ -0.51
TSPAN9-201ENST00000011898 ZNF490Q9ULM2 529 aaPredicted RBP11.88□□□□□ -0.51
TSPAN9-201ENST00000011898 CPQQ9Y646 472 aa11.88□□□□□ -0.51
TSPAN9-201ENST00000011898 METTL21EPA6NDL7 271 aa11.88□□□□□ -0.51
TSPAN9-201ENST00000011898 H3BMQ9 156 aa11.88□□□□□ -0.51
TSPAN9-201ENST00000011898 VILLO15195 856 aa11.88□□□□□ -0.51
TSPAN9-201ENST00000011898 FAM189A1O60320 539 aa11.88□□□□□ -0.51
TSPAN9-201ENST00000011898 ERN1O75460 977 aaKnown RBP11.88□□□□□ -0.51
TSPAN9-201ENST00000011898 CRATP43155 626 aa11.88□□□□□ -0.51
TSPAN9-201ENST00000011898 MAPK8P45983 427 aa11.88□□□□□ -0.51
TSPAN9-201ENST00000011898 SNRPD1P62314 119 aaKnown RBP11.88□□□□□ -0.51
TSPAN9-201ENST00000011898 PFKPQ01813 784 aa11.88□□□□□ -0.51
TSPAN9-201ENST00000011898 PIGFQ07326 219 aa11.88□□□□□ -0.51
TSPAN9-201ENST00000011898 PMS2P3Q13401 168 aa11.88□□□□□ -0.51
TSPAN9-201ENST00000011898 DEF8Q6ZN54 512 aa11.88□□□□□ -0.51
TSPAN9-201ENST00000011898 R3HCC1LQ7Z5L2 792 aaKnown RBP11.88□□□□□ -0.51
TSPAN9-201ENST00000011898 GRIN3AQ8TCU5 1115 aa11.88□□□□□ -0.51
TSPAN9-201ENST00000011898 CDKN2AIPNLQ96HQ2 116 aa11.88□□□□□ -0.51
TSPAN9-201ENST00000011898 COG8Q96MW5 612 aa11.88□□□□□ -0.51
TSPAN9-201ENST00000011898 CCDC115Q96NT0 180 aa11.88□□□□□ -0.51
TSPAN9-201ENST00000011898 ERMAPQ96PL5 475 aaPredicted RBP11.88□□□□□ -0.51
TSPAN9-201ENST00000011898 TRIT1Q9H3H1 467 aaKnown RBP11.88□□□□□ -0.51
TSPAN9-201ENST00000011898 RPS6KA6Q9UK32 745 aa11.88□□□□□ -0.51
TSPAN9-201ENST00000011898 CLEC4AQ9UMR7 237 aa11.88□□□□□ -0.51
TSPAN9-201ENST00000011898 SRCAPQ6ZRS2 3230 aa11.88□□□□□ -0.51
TSPAN9-201ENST00000011898 KMOO15229 486 aa11.87□□□□□ -0.51
TSPAN9-201ENST00000011898 INSIG1O15503 277 aa11.87□□□□□ -0.51
TSPAN9-201ENST00000011898 ACSL4O60488 711 aa11.87□□□□□ -0.51
TSPAN9-201ENST00000011898 PRKCGP05129 697 aa11.87□□□□□ -0.51
TSPAN9-201ENST00000011898 FAM163BP0C2L3 166 aa11.87□□□□□ -0.51
TSPAN9-201ENST00000011898 FAM214AQ32MH5 1076 aa11.87□□□□□ -0.51
TSPAN9-201ENST00000011898 OGFRL1Q5TC84 451 aaPredicted RBP11.87□□□□□ -0.51
TSPAN9-201ENST00000011898 FBXL22Q6P050 247 aa11.87□□□□□ -0.51
TSPAN9-201ENST00000011898 FAM122CQ6P4D5 195 aa11.87□□□□□ -0.51
TSPAN9-201ENST00000011898 CERS6Q6ZMG9 384 aa11.87□□□□□ -0.51
TSPAN9-201ENST00000011898 TTPALQ9BTX7 342 aa11.87□□□□□ -0.51
TSPAN9-201ENST00000011898 TLE6Q9H808 572 aa11.87□□□□□ -0.51
TSPAN9-201ENST00000011898 LRTM1Q9HBL6 345 aa11.87□□□□□ -0.51
TSPAN9-201ENST00000011898 CLN6Q9NWW5 311 aa11.87□□□□□ -0.51
TSPAN9-201ENST00000011898 COMMD9Q9P000 198 aa11.87□□□□□ -0.51
TSPAN9-201ENST00000011898 TRPC4Q9UBN4 977 aa11.87□□□□□ -0.51
TSPAN9-201ENST00000011898 AQP12BA6NM10 295 aa11.87□□□□□ -0.51
TSPAN9-201ENST00000011898 KPNA3O00505 521 aaPredicted RBP11.87□□□□□ -0.51
TSPAN9-201ENST00000011898 ADAMTS4O75173 837 aa11.87□□□□□ -0.51
TSPAN9-201ENST00000011898 XYLBO75191 536 aa11.87□□□□□ -0.51
TSPAN9-201ENST00000011898 STK16O75716 305 aa11.87□□□□□ -0.51
TSPAN9-201ENST00000011898 C8BP07358 591 aa11.87□□□□□ -0.51
TSPAN9-201ENST00000011898 CORO1AP31146 461 aaKnown RBP11.87□□□□□ -0.51
TSPAN9-201ENST00000011898 MAGEA2P43356 314 aa11.87□□□□□ -0.51
TSPAN9-201ENST00000011898 FAM91A1Q658Y4 838 aa11.87□□□□□ -0.51
TSPAN9-201ENST00000011898 STEAP4Q687X5 459 aa11.87□□□□□ -0.51
TSPAN9-201ENST00000011898 MSANTD2Q6P1R3 559 aa11.87□□□□□ -0.51
TSPAN9-201ENST00000011898 USP43Q70EL4 1123 aa11.87□□□□□ -0.51
TSPAN9-201ENST00000011898 DCP2Q8IU60 420 aaKnown RBP11.87□□□□□ -0.51
TSPAN9-201ENST00000011898 AQP12AQ8IXF9 295 aa11.87□□□□□ -0.51
TSPAN9-201ENST00000011898 GPR65Q8IYL9 337 aa11.87□□□□□ -0.51
TSPAN9-201ENST00000011898 SLC37A3Q8NCC5 494 aa11.87□□□□□ -0.51
TSPAN9-201ENST00000011898 MED30Q96HR3 178 aa11.87□□□□□ -0.51
TSPAN9-201ENST00000011898 ART5Q96L15 291 aa11.87□□□□□ -0.51
TSPAN9-201ENST00000011898 APOLD1Q96LR9 279 aa11.87□□□□□ -0.51
TSPAN9-201ENST00000011898 AIFM2Q9BRQ8 373 aa11.87□□□□□ -0.51
TSPAN9-201ENST00000011898 MUC13Q9H3R2 512 aa11.87□□□□□ -0.51
TSPAN9-201ENST00000011898 GALPQ9UBC7 116 aa11.87□□□□□ -0.51
TSPAN9-201ENST00000011898 DOCK5Q9H7D0 1870 aa11.87□□□□□ -0.51
TSPAN9-201ENST00000011898 ELOVL7A1L3X0 281 aa11.87□□□□□ -0.51
TSPAN9-201ENST00000011898 AP3D1O14617 1153 aa11.87□□□□□ -0.51
TSPAN9-201ENST00000011898 DCLK1O15075 740 aa11.87□□□□□ -0.51
TSPAN9-201ENST00000011898 IL1BP01584 269 aa11.87□□□□□ -0.51
TSPAN9-201ENST00000011898 OGNP20774 298 aaKnown RBP11.87□□□□□ -0.51
TSPAN9-201ENST00000011898 ELK4P28324 431 aa11.87□□□□□ -0.51
TSPAN9-201ENST00000011898 DAG1Q14118 895 aa11.87□□□□□ -0.51
TSPAN9-201ENST00000011898 MEP1AQ16819 746 aa11.87□□□□□ -0.51
TSPAN9-201ENST00000011898 ZNF614Q8N883 585 aa11.87□□□□□ -0.51
TSPAN9-201ENST00000011898 GALNT11Q8NCW6 608 aa11.87□□□□□ -0.51
TSPAN9-201ENST00000011898 OR10A6Q8NH74 314 aa11.87□□□□□ -0.51
TSPAN9-201ENST00000011898 LRRC58Q96CX6 371 aa11.87□□□□□ -0.51
TSPAN9-201ENST00000011898 CLIP3Q96DZ5 547 aa11.87□□□□□ -0.51
TSPAN9-201ENST00000011898 SLC47A1Q96FL8 570 aa11.87□□□□□ -0.51
TSPAN9-201ENST00000011898 MFSD1Q9H3U5 465 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms