RNA–Protein interactions for RNA: ENSMUST00000111816.2

Trim71-201, Transcript of E3 ubiquitin-protein ligase TRIM71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim71, Length 9,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim71-201ENSMUST00000111816 Zbtb2Q3V3W4 514 aaKnown RBP18.08■□□□□ 0.49
Trim71-201ENSMUST00000111816 Gm527Q4KL13 310 aa18.08■□□□□ 0.49
Trim71-201ENSMUST00000111816 MINDY3Q9CV28 444 aa18.08■□□□□ 0.49
Trim71-201ENSMUST00000111816 Vsig1Q9D2J4 407 aa18.08■□□□□ 0.49
Trim71-201ENSMUST00000111816 5830473C10RikF8VQ07 620 aa18.08■□□□□ 0.49
Trim71-201ENSMUST00000111816 Hsd17b10O08756 261 aaKnown RBP18.08■□□□□ 0.49
Trim71-201ENSMUST00000111816 Prkag1O54950 330 aa18.08■□□□□ 0.49
Trim71-201ENSMUST00000111816 Slc1a3P56564 543 aa18.08■□□□□ 0.49
Trim71-201ENSMUST00000111816 Slc43a1Q8BSM7 564 aa18.08■□□□□ 0.49
Trim71-201ENSMUST00000111816 Scn1aA2APX8 2009 aa18.08■□□□□ 0.48
Trim71-201ENSMUST00000111816 Slc6a6O35316 621 aa18.08■□□□□ 0.48
Trim71-201ENSMUST00000111816 Pcbp1P60335 356 aaKnown RBP18.08■□□□□ 0.48
Trim71-201ENSMUST00000111816 EpycP70186 322 aa18.08■□□□□ 0.48
Trim71-201ENSMUST00000111816 Arhgap1Q5FWK3 439 aa18.08■□□□□ 0.48
Trim71-201ENSMUST00000111816 Susd4Q8BH32 490 aa18.08■□□□□ 0.48
Trim71-201ENSMUST00000111816 HaghQ99KB8 309 aa18.08■□□□□ 0.48
Trim71-201ENSMUST00000111816 Fam212aQ9CX62 282 aa18.08■□□□□ 0.48
Trim71-201ENSMUST00000111816 Stra6lQ9DBN1 621 aa18.08■□□□□ 0.48
Trim71-201ENSMUST00000111816 Tomm20Q9DCC8 145 aa18.08■□□□□ 0.48
Trim71-201ENSMUST00000111816 Cdh13Q9WTR5 714 aa18.08■□□□□ 0.48
Trim71-201ENSMUST00000111816 Olfr1156A2AVC3 323 aa18.08■□□□□ 0.48
Trim71-201ENSMUST00000111816 Prdm14E9Q3T6 561 aa18.08■□□□□ 0.48
Trim71-201ENSMUST00000111816 Olfr557E9Q550 322 aa18.08■□□□□ 0.48
Trim71-201ENSMUST00000111816 Zfp871G5E905 615 aa18.08■□□□□ 0.48
Trim71-201ENSMUST00000111816 Kdm1bQ8CIG3 826 aa18.08■□□□□ 0.48
Trim71-201ENSMUST00000111816 Tmem41aQ9D8U2 264 aa18.08■□□□□ 0.48
Trim71-201ENSMUST00000111816 Ccdc54Q9DAL3 329 aa18.08■□□□□ 0.48
Trim71-201ENSMUST00000111816 PctpP53808 214 aa18.08■□□□□ 0.48
Trim71-201ENSMUST00000111816 4933402J07RikQ8BHX0 270 aa18.08■□□□□ 0.48
Trim71-201ENSMUST00000111816 Cstf2Q8BIQ5 580 aaKnown RBP18.08■□□□□ 0.48
Trim71-201ENSMUST00000111816 Ago4Q8CJF8 861 aa18.08■□□□□ 0.48
Trim71-201ENSMUST00000111816 Pcdha8Q91Y12 946 aa18.08■□□□□ 0.48
Trim71-201ENSMUST00000111816 Pramef25A2ASI9 494 aa18.08■□□□□ 0.48
Trim71-201ENSMUST00000111816 Apold1E9Q0X2 246 aa18.08■□□□□ 0.48
Trim71-201ENSMUST00000111816 Il13ra2O88786 383 aa18.08■□□□□ 0.48
Trim71-201ENSMUST00000111816 Clec4a1Q80UI7 245 aa18.08■□□□□ 0.48
Trim71-201ENSMUST00000111816 Lats1Q8BYR2 1129 aa18.08■□□□□ 0.48
Trim71-201ENSMUST00000111816 Polr1eQ8K202 482 aaKnown RBP18.08■□□□□ 0.48
Trim71-201ENSMUST00000111816 SncaipQ99ME3 962 aa18.08■□□□□ 0.48
Trim71-201ENSMUST00000111816 Zfp869Q9DC47 529 aa18.08■□□□□ 0.48
Trim71-201ENSMUST00000111816 Gsk3aQ2NL51 490 aa18.07■□□□□ 0.48
Trim71-201ENSMUST00000111816 H2-M3Q31093 336 aa18.07■□□□□ 0.48
Trim71-201ENSMUST00000111816 BtrcQ3ULA2 605 aaKnown RBP18.07■□□□□ 0.48
Trim71-201ENSMUST00000111816 Bclaf1Q8K019 919 aaKnown RBP18.07■□□□□ 0.48
Trim71-201ENSMUST00000111816 PolkQ9QUG2 852 aa18.07■□□□□ 0.48
Trim71-201ENSMUST00000111816 JrkQ60976 557 aa18.07■□□□□ 0.48
Trim71-201ENSMUST00000111816 Scamp1Q8K021 338 aa18.07■□□□□ 0.48
Trim71-201ENSMUST00000111816 Slc6a21A0A1B0GSD2 748 aa18.07■□□□□ 0.48
Trim71-201ENSMUST00000111816 Pgap1Q3UUQ7 922 aa18.07■□□□□ 0.48
Trim71-201ENSMUST00000111816 Nxpe4Q52KP5 543 aa18.07■□□□□ 0.48
Trim71-201ENSMUST00000111816 Prap1Q80XD8 149 aa18.07■□□□□ 0.48
Trim71-201ENSMUST00000111816 Tmed4Q8R1V4 227 aa18.07■□□□□ 0.48
Trim71-201ENSMUST00000111816 RhojQ9ER71 214 aa18.07■□□□□ 0.48
Trim71-201ENSMUST00000111816 Vnn1Q9Z0K8 512 aa18.07■□□□□ 0.48
Trim71-201ENSMUST00000111816 Cyp2b9P12790 491 aa18.07■□□□□ 0.48
Trim71-201ENSMUST00000111816 Cyp2a5P20852 494 aa18.07■□□□□ 0.48
Trim71-201ENSMUST00000111816 Fgl1Q71KU9 314 aa18.07■□□□□ 0.48
Trim71-201ENSMUST00000111816 Olfr1385Q7TQT1 309 aa18.07■□□□□ 0.48
Trim71-201ENSMUST00000111816 Cnksr3Q8BMA3 555 aa18.07■□□□□ 0.48
Trim71-201ENSMUST00000111816 Bend5Q8C6D4 421 aa18.07■□□□□ 0.48
Trim71-201ENSMUST00000111816 Scpep1Q920A5 452 aa18.07■□□□□ 0.48
Trim71-201ENSMUST00000111816 Trps1Q925H1 1281 aa18.07■□□□□ 0.48
Trim71-201ENSMUST00000111816 Arl8bQ9CQW2 186 aa18.07■□□□□ 0.48
Trim71-201ENSMUST00000111816 Rgs21V9GXQ3 152 aa18.07■□□□□ 0.48
Trim71-201ENSMUST00000111816 Gm498D3YYH9 372 aa18.07■□□□□ 0.48
Trim71-201ENSMUST00000111816 Btbd2E9PUS2 523 aa18.07■□□□□ 0.48
Trim71-201ENSMUST00000111816 AmhP27106 555 aa18.07■□□□□ 0.48
Trim71-201ENSMUST00000111816 Uba1Q02053 1058 aaKnown RBP18.07■□□□□ 0.48
Trim71-201ENSMUST00000111816 Serpinf2Q61247 491 aa18.07■□□□□ 0.48
Trim71-201ENSMUST00000111816 Fastkd5Q7TMV3 762 aa18.07■□□□□ 0.48
Trim71-201ENSMUST00000111816 Clec1aQ8BWY2 269 aa18.07■□□□□ 0.48
Trim71-201ENSMUST00000111816 Sdr9c7Q8K3P0 313 aa18.07■□□□□ 0.48
Trim71-201ENSMUST00000111816 Cyp2j8G3UZ38 503 aa18.07■□□□□ 0.48
Trim71-201ENSMUST00000111816 Sema3gQ4LFA9 780 aa18.07■□□□□ 0.48
Trim71-201ENSMUST00000111816 Q504N7 393 aa18.07■□□□□ 0.48
Trim71-201ENSMUST00000111816 UnklQ5FWH2 727 aaKnown RBP18.07■□□□□ 0.48
Trim71-201ENSMUST00000111816 Faim2Q8K097 317 aa18.07■□□□□ 0.48
Trim71-201ENSMUST00000111816 Olfr307Q8VFN8 313 aa18.07■□□□□ 0.48
Trim71-201ENSMUST00000111816 Il22Q9JJY9 179 aa18.07■□□□□ 0.48
Trim71-201ENSMUST00000111816 B3galt4Q9Z0F0 371 aa18.07■□□□□ 0.48
Trim71-201ENSMUST00000111816 Gm3327F7C9A1 213 aa18.07■□□□□ 0.48
Trim71-201ENSMUST00000111816 F10O88947 481 aa18.07■□□□□ 0.48
Trim71-201ENSMUST00000111816 Cdk1P11440 297 aa18.07■□□□□ 0.48
Trim71-201ENSMUST00000111816 Idh3gP70404 393 aa18.07■□□□□ 0.48
Trim71-201ENSMUST00000111816 Gpr149Q3UVY1 732 aa18.07■□□□□ 0.48
Trim71-201ENSMUST00000111816 Zfp658Q5PPQ4 887 aa18.07■□□□□ 0.48
Trim71-201ENSMUST00000111816 Fgfr3Q61851 801 aa18.07■□□□□ 0.48
Trim71-201ENSMUST00000111816 Fignl1Q8BPY9 683 aa18.07■□□□□ 0.48
Trim71-201ENSMUST00000111816 Pcdhb19Q91Y01 801 aa18.07■□□□□ 0.48
Trim71-201ENSMUST00000111816 Scgb2b17S4R2V3 82 aa18.07■□□□□ 0.48
Trim71-201ENSMUST00000111816 Gm8127E9Q0P0 100 aa18.06■□□□□ 0.48
Trim71-201ENSMUST00000111816 Art5P70352 309 aa18.06■□□□□ 0.48
Trim71-201ENSMUST00000111816 Irf6P97431 467 aa18.06■□□□□ 0.48
Trim71-201ENSMUST00000111816 Tmem69Q3KQJ0 245 aa18.06■□□□□ 0.48
Trim71-201ENSMUST00000111816 Adam5Q3TTE0 751 aa18.06■□□□□ 0.48
Trim71-201ENSMUST00000111816 Ints12Q9D168 461 aa18.06■□□□□ 0.48
Trim71-201ENSMUST00000111816 Rnase10Q9D5A9 208 aa18.06■□□□□ 0.48
Trim71-201ENSMUST00000111816 Tbc1d21Q9D9D3 336 aa18.06■□□□□ 0.48
Trim71-201ENSMUST00000111816 Sac3d1A6H687 427 aa18.06■□□□□ 0.48
Trim71-201ENSMUST00000111816 Abcb1aP21447 1276 aa18.06■□□□□ 0.48
Retrieved 100 of 22,080 RNA–protein pairs in 27.7 ms