RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Olfr873Q8VFJ0 319 aa8.86□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Imp3Q921Y2 184 aaKnown RBP8.86□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Pmf1Q9CPV5 202 aa8.86□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Nsa2Q9CR47 260 aaKnown RBP8.86□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Fam227bQ9D518 532 aa8.86□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Efhc1Q9D9T8 648 aa8.86□□□□□ -0.99
Upf3b-201ENSMUST00000076265 ParvaQ9EPC1 372 aa8.86□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Vmn1r41Q9EQ44 310 aa8.86□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Chrm2Q9ERZ4 466 aa8.86□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Aldh9a1Q9JLJ2 494 aa8.86□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Mlf1Q9QWV4 267 aa8.86□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Fbxo16Q9QZM9 334 aa8.86□□□□□ -0.99
Upf3b-201ENSMUST00000076265 SrrQ9QZX7 339 aa8.86□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Spint1Q9R097 507 aa8.86□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Celf2Q9Z0H4 508 aaKnown RBP8.86□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Irs4Q9Z0Y7 1216 aa8.86□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Ccdc9bA3KGF9 545 aa8.86□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Scml2B1AVB3 969 aa8.86□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Ccnb1ip1D3Z3K2 276 aa8.86□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Ifit3bE9PV48 403 aa8.86□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Gm20441G3UYJ7 252 aa8.86□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Ms4a18J3QN01 344 aa8.86□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Olfr603L7N1Y4 312 aa8.86□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Vmn2r68L7N2B3 851 aa8.86□□□□□ -0.99
Upf3b-201ENSMUST00000076265 H2-M9O19442 342 aa8.86□□□□□ -0.99
Upf3b-201ENSMUST00000076265 AmbnO55189 407 aa8.86□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Sypl2O89104 264 aa8.86□□□□□ -0.99
Upf3b-201ENSMUST00000076265 ThbdP15306 577 aa8.86□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Nectin2P32507 530 aa8.86□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Cdh15P33146 784 aa8.86□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Emp1P47801 160 aa8.86□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Wnt10bP48614 389 aa8.86□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Cd38P56528 304 aa8.86□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Olfm3P63056 478 aa8.86□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Cdh9P70407 786 aa8.86□□□□□ -0.99
Upf3b-201ENSMUST00000076265 ptchd1Q14B62 888 aa8.86□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Dsg1aQ61495 1057 aa8.86□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Tas2r40Q7TQB8 319 aa8.86□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Pan2Q8BGF7 1200 aaKnown RBP8.86□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Hs3st5Q8BSL4 346 aa8.86□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Tmem200aQ8C817 491 aa8.86□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Celf3Q8CIN6 465 aa8.86□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Tceal3Q8R0A5 200 aa8.86□□□□□ -0.99
Upf3b-201ENSMUST00000076265 SgtbQ8VD33 304 aa8.86□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Olfr599Q8VG01 315 aa8.86□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Tdrd3Q91W18 743 aaKnown RBP8.86□□□□□ -0.99
Upf3b-201ENSMUST00000076265 TardbpQ921F2 414 aaKnown RBP8.86□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Sh3bp4Q921I6 962 aa8.86□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Mtif3Q9CZD5 276 aa8.86□□□□□ -0.99
Upf3b-201ENSMUST00000076265 D930007J09RikQ9D2K6 131 aa8.86□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Rbm31yQ9D3U4 565 aa8.86□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Q9D454 513 aa8.86□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Cyp2c55Q9D816 490 aa8.86□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Scube2Q9JJS0 997 aa8.86□□□□□ -0.99
Upf3b-201ENSMUST00000076265 TinagQ9WUR0 475 aa8.86□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Sh3bgrQ9WUZ7 214 aa8.86□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Zdbf2Q5SS00 2493 aaKnown RBP8.85□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Col24a1Q30D77 1733 aa8.85□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Zfp982A2A8Q4 368 aa8.85□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Gm5072A2AHM1 344 aa8.85□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Mroh7A2AVR2 1279 aa8.85□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Btnl6A2CG22 539 aa8.85□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Ces2hF6Z9B9 558 aa8.85□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Gm3486L7N2D0 199 aa8.85□□□□□ -0.99
Upf3b-201ENSMUST00000076265 MpoP11247 718 aa8.85□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Il2rbP16297 539 aa8.85□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Zp2P20239 713 aa8.85□□□□□ -0.99
Upf3b-201ENSMUST00000076265 CremP27699 357 aa8.85□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Rhox5P52651 210 aa8.85□□□□□ -0.99
Upf3b-201ENSMUST00000076265 TgfbiP82198 683 aa8.85□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Zdhhc11Q14AK4 347 aa8.85□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Defb23Q30KP0 166 aa8.85□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Slc9a1Q61165 820 aa8.85□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Fam120bQ6RI63 786 aa8.85□□□□□ -0.99
Upf3b-201ENSMUST00000076265 St18Q80TY4 1045 aa8.85□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Slc6a17Q8BJI1 727 aa8.85□□□□□ -0.99
Upf3b-201ENSMUST00000076265 NracQ8BNX7 165 aa8.85□□□□□ -0.99
Upf3b-201ENSMUST00000076265 CptpQ8BS40 216 aa8.85□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Cars2Q8BYM8 551 aa8.85□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Coro2aQ8C0P5 524 aa8.85□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Zhx3Q8C0Q2 951 aa8.85□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Q8C1R3 189 aa8.85□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Slc43a2Q8CGA3 568 aa8.85□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Oraov1Q8CH62 137 aa8.85□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Depdc1aQ8CIG0 804 aa8.85□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Dapk2Q8VDF3 370 aa8.85□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Olfr24Q8VFM9 313 aa8.85□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Camk1Q91YS8 374 aa8.85□□□□□ -0.99
Upf3b-201ENSMUST00000076265 SdhbQ9CQA3 282 aa8.85□□□□□ -0.99
Upf3b-201ENSMUST00000076265 DenrQ9CQJ6 198 aaKnown RBP8.85□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Cd2bp2Q9CWK3 342 aaKnown RBP8.85□□□□□ -0.99
Upf3b-201ENSMUST00000076265 AhspQ9CY02 102 aa8.85□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Trim13Q9CYB0 407 aa8.85□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Dimt1Q9D0D4 313 aaKnown RBP8.85□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Vmn1r65Q9EPS7 332 aa8.85□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Atp6v1c1Q9Z1G3 382 aa8.85□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Tsc22d3Q9Z2S7 137 aa8.85□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Zfp534A2A7A1 661 aa8.85□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Lgr4A2ARI4 951 aa8.85□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Adam34A2RSG8 714 aa8.85□□□□□ -0.99
Retrieved 100 of 22,080 RNA–protein pairs in 35.4 ms