RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Slc7a2P18581 657 aa10.09□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Gria2P23819 883 aa10.09□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Klrb1aP27811 227 aa10.09□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 DcnP28654 354 aa10.09□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Gm428Q3UTE2 360 aa10.09□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Rbl1Q64701 1063 aa10.09□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 BC061212Q6P8K3 481 aa10.09□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Paqr6Q6TCG5 343 aa10.09□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Fgd2Q8BY35 655 aa10.09□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Q8CDN1 933 aa10.09□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Vmn1r188Q8K3N2 308 aa10.09□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Gsg1Q8R1W2 324 aa10.09□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Tspan8Q8R3G9 235 aa10.09□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Olfr1176Q8VG40 315 aa10.09□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Plpp3Q99JY8 312 aa10.09□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Yipf2Q99LP8 312 aa10.09□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Krt88Q9CPR6 171 aa10.09□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Stxbp1O08599 594 aa10.09□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Zfp14P10755 501 aa10.09□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Cypt2Q6P924 180 aa10.09□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Uts2bQ765I1 113 aa10.09□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 NanogQ80Z64 305 aa10.09□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Pomt2Q8BGQ4 820 aa10.09□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Psd4Q8BLR5 1005 aa10.09□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Sdhaf3Q8BQU3 125 aa10.09□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 SynpoQ8CC35 929 aaKnown RBP10.09□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Rnf128Q9D304 428 aa10.09□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Mettl15Q9DCL4 406 aa10.09□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 AnkhQ9JHZ2 492 aa10.09□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Olfr2Q9QWU6 327 aa10.09□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Ubqln2Q9QZM0 638 aa10.09□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Galk1Q9R0N0 392 aa10.09□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Adam18Q9R157 719 aa10.09□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Ptdss2Q9Z1X2 473 aa10.09□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Ankrd31A0A140LI88 1765 aa10.09□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Vmn2r17E9PYF5 849 aa10.08□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Zfp758E9QAA1 583 aa10.08□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Clk3O35492 638 aa10.08□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Hcn3O88705 779 aa10.08□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Ckmt1P30275 418 aaKnown RBP10.08□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Ccr4P51680 360 aa10.08□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Jak1P52332 1153 aa10.08□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Lrrc66Q8K0B3 872 aa10.08□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Ahsa2Q8N9S3 331 aa10.08□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Adap2Q8R2V5 381 aa10.08□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Hspa14Q99M31 509 aa10.08□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Adgrf4Q9D2L6 698 aa10.08□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Uqcrc2Q9DB77 453 aaKnown RBP10.08□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Myh8P13542 1937 aa10.08□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Rhox13F6YCR7 232 aa10.08□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Oaz2O08608 189 aa10.08□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Gon7P0C8B4 98 aa10.08□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 SqleP52019 572 aa10.08□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Ufm1P61961 85 aa10.08□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 EpycP70186 322 aa10.08□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Zfp280bQ505F4 534 aa10.08□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Gpr142Q7TQN9 365 aa10.08□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 TtpaQ8BWP5 278 aa10.08□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Slc25a36Q922G0 311 aa10.08□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Cnot11Q9CWN7 505 aa10.08□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 PyurfQ9D1C3 112 aa10.08□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Smg9Q9DB90 520 aa10.08□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Mrps15Q9DC71 258 aaKnown RBP10.08□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Dnajb9Q9QYI6 222 aa10.08□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Gm7275E9Q1B3 247 aa10.08□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Gm20441G3UYJ7 252 aa10.08□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Bub1O08901 1058 aa10.08□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 KeraO35367 351 aa10.08□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 FkbplO35450 347 aa10.08□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Kcnc2Q14B80 642 aa10.08□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Phf24Q80TL4 400 aa10.08□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 MogsQ80UM7 834 aaKnown RBP10.08□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Amigo1Q80ZD8 492 aa10.08□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Ccdc126Q8BIS8 140 aa10.08□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Hmgcll1Q8JZS7 343 aa10.08□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Fam118aQ91YN1 357 aa10.08□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Tmem9Q9CR23 183 aa10.08□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Mospd2Q9CWP6 518 aa10.08□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 CutalQ9D1U5 156 aa10.08□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Ebna1bp2Q9D903 306 aaKnown RBP10.08□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Rhox9Q9EQM5 227 aa10.08□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Olfr630Q9EQQ7 319 aa10.08□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Sh3glb1Q9JK48 365 aa10.08□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Rdh11Q9QYF1 316 aa10.08□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Adam24Q9R160 761 aa10.08□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Lbx2Q9WUN8 195 aa10.08□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Gm37596A0A0A6YXL2 336 aa10.08□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Tyw5A2RSX7 315 aa10.08□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 BC049352E9Q2Z6 85 aa10.08□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Tmem265E9Q8G3 109 aa10.08□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Ces2hF6Z9B9 558 aa10.08□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Znf683I7HJS4 458 aa10.08□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Psmc3ipO35047 217 aa10.08□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Clcn7O70496 803 aa10.08□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Zfp60P16374 707 aa10.08□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 TktP40142 623 aaKnown RBP10.08□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 EpxP49290 716 aa10.08□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 TgfbiP82198 683 aa10.08□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Fmo5P97872 533 aa10.08□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Gsk3aQ2NL51 490 aa10.08□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 25.3 ms