RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Ugt2b35Q8BJL9 529 aa13.13□□□□□ -0.31
Nup88-201ENSMUST00000035283 UstQ8BUB6 407 aa13.13□□□□□ -0.31
Nup88-201ENSMUST00000035283 Fndc3aQ8BX90 1198 aa13.13□□□□□ -0.31
Nup88-201ENSMUST00000035283 Utp4Q8R2N2 686 aaKnown RBP13.13□□□□□ -0.31
Nup88-201ENSMUST00000035283 Nudt4Q8R2U6 179 aa13.13□□□□□ -0.31
Nup88-201ENSMUST00000035283 Vps4aQ8VEJ9 437 aa13.13□□□□□ -0.31
Nup88-201ENSMUST00000035283 Scpep1Q920A5 452 aa13.13□□□□□ -0.31
Nup88-201ENSMUST00000035283 Duoxa2Q9D311 320 aa13.13□□□□□ -0.31
Nup88-201ENSMUST00000035283 Rhobtb1Q9DAK3 695 aa13.13□□□□□ -0.31
Nup88-201ENSMUST00000035283 Tcf7l1Q9Z1J1 584 aa13.13□□□□□ -0.31
Nup88-201ENSMUST00000035283 Tanc1Q0VGY8 1856 aa13.13□□□□□ -0.31
Nup88-201ENSMUST00000035283 Tbkbp1A2A9T0 611 aa13.13□□□□□ -0.31
Nup88-201ENSMUST00000035283 Ccdc163A2AGD7 326 aa13.13□□□□□ -0.31
Nup88-201ENSMUST00000035283 Fam151bD3YUE4 279 aa13.13□□□□□ -0.31
Nup88-201ENSMUST00000035283 Ccnb1ip1D3Z3K2 276 aa13.13□□□□□ -0.31
Nup88-201ENSMUST00000035283 Vmn2r21K7N6Y7 853 aa13.13□□□□□ -0.31
Nup88-201ENSMUST00000035283 Vmn2r20L7N2B1 853 aa13.13□□□□□ -0.31
Nup88-201ENSMUST00000035283 Gm3488M0QW81 238 aa13.13□□□□□ -0.31
Nup88-201ENSMUST00000035283 Hsd17b10O08756 261 aaKnown RBP13.13□□□□□ -0.31
Nup88-201ENSMUST00000035283 AmbnO55189 407 aa13.13□□□□□ -0.31
Nup88-201ENSMUST00000035283 Hipk1O88904 1210 aa13.13□□□□□ -0.31
Nup88-201ENSMUST00000035283 Cd93O89103 644 aa13.13□□□□□ -0.31
Nup88-201ENSMUST00000035283 Dnajb5O89114 348 aa13.13□□□□□ -0.31
Nup88-201ENSMUST00000035283 Cd247P24161 164 aa13.13□□□□□ -0.31
Nup88-201ENSMUST00000035283 Csf2rb2P26954 878 aa13.13□□□□□ -0.31
Nup88-201ENSMUST00000035283 Gna12P27600 379 aa13.13□□□□□ -0.31
Nup88-201ENSMUST00000035283 DbtP53395 482 aa13.13□□□□□ -0.31
Nup88-201ENSMUST00000035283 CartptP56388 129 aa13.13□□□□□ -0.31
Nup88-201ENSMUST00000035283 Cct7P80313 544 aa13.13□□□□□ -0.31
Nup88-201ENSMUST00000035283 Pdcd4Q61823 469 aa13.13□□□□□ -0.31
Nup88-201ENSMUST00000035283 Ca4Q64444 305 aa13.13□□□□□ -0.31
Nup88-201ENSMUST00000035283 Paqr3Q6TCG8 311 aa13.13□□□□□ -0.31
Nup88-201ENSMUST00000035283 Lrp10Q7TQH7 713 aa13.13□□□□□ -0.31
Nup88-201ENSMUST00000035283 Aifm2Q8BUE4 373 aa13.13□□□□□ -0.31
Nup88-201ENSMUST00000035283 Ca12Q8CI85 354 aa13.13□□□□□ -0.31
Nup88-201ENSMUST00000035283 Ago1Q8CJG1 857 aaKnown RBP13.13□□□□□ -0.31
Nup88-201ENSMUST00000035283 Hmgcs1Q8JZK9 520 aa13.13□□□□□ -0.31
Nup88-201ENSMUST00000035283 Vmn1r84Q8R284 318 aa13.13□□□□□ -0.31
Nup88-201ENSMUST00000035283 Tnfaip8Q921Z5 198 aa13.13□□□□□ -0.31
Nup88-201ENSMUST00000035283 Ovca2Q9D7E3 225 aa13.13□□□□□ -0.31
Nup88-201ENSMUST00000035283 Tor1aQ9ER39 333 aa13.13□□□□□ -0.31
Nup88-201ENSMUST00000035283 Aff4Q9ESC8 1160 aa13.13□□□□□ -0.31
Nup88-201ENSMUST00000035283 Myg1Q9JK81 380 aa13.13□□□□□ -0.31
Nup88-201ENSMUST00000035283 Skint11A7XV14 364 aa13.12□□□□□ -0.31
Nup88-201ENSMUST00000035283 Nipsnap3aB1AWZ3 247 aa13.12□□□□□ -0.31
Nup88-201ENSMUST00000035283 Npc1O35604 1277 aa13.12□□□□□ -0.31
Nup88-201ENSMUST00000035283 Bnc1O35914 961 aa13.12□□□□□ -0.31
Nup88-201ENSMUST00000035283 P01665 111 aa13.12□□□□□ -0.31
Nup88-201ENSMUST00000035283 P01666 111 aa13.12□□□□□ -0.31
Nup88-201ENSMUST00000035283 Cma1P21844 247 aa13.12□□□□□ -0.31
Nup88-201ENSMUST00000035283 Slc6a11P31650 627 aa13.12□□□□□ -0.31
Nup88-201ENSMUST00000035283 Erp29P57759 262 aaKnown RBP13.12□□□□□ -0.31
Nup88-201ENSMUST00000035283 Fam189bQ5HZJ5 669 aa13.12□□□□□ -0.31
Nup88-201ENSMUST00000035283 PtprnQ60673 979 aa13.12□□□□□ -0.31
Nup88-201ENSMUST00000035283 Mxd4Q60948 209 aa13.12□□□□□ -0.31
Nup88-201ENSMUST00000035283 HadhQ61425 314 aa13.12□□□□□ -0.31
Nup88-201ENSMUST00000035283 Ranbp10Q6VN19 620 aaKnown RBP13.12□□□□□ -0.31
Nup88-201ENSMUST00000035283 Olfr664Q7TRP5 306 aa13.12□□□□□ -0.31
Nup88-201ENSMUST00000035283 Fam83aQ8K2P2 436 aa13.12□□□□□ -0.31
Nup88-201ENSMUST00000035283 Rnf219Q8K2Y0 722 aa13.12□□□□□ -0.31
Nup88-201ENSMUST00000035283 Ptgr2Q8VDQ1 351 aa13.12□□□□□ -0.31
Nup88-201ENSMUST00000035283 Retreg1dQ8VE91 480 aa13.12□□□□□ -0.31
Nup88-201ENSMUST00000035283 TraipQ8VIG6 470 aa13.12□□□□□ -0.31
Nup88-201ENSMUST00000035283 Znf622Q91VY9 476 aa13.12□□□□□ -0.31
Nup88-201ENSMUST00000035283 Arrb2Q91YI4 410 aa13.12□□□□□ -0.31
Nup88-201ENSMUST00000035283 Slc8b1Q925Q3 585 aa13.12□□□□□ -0.31
Nup88-201ENSMUST00000035283 Rnaseh2aQ9CWY8 301 aa13.12□□□□□ -0.31
Nup88-201ENSMUST00000035283 NarfQ9CYQ7 462 aa13.12□□□□□ -0.31
Nup88-201ENSMUST00000035283 Timm50Q9D880 353 aa13.12□□□□□ -0.31
Nup88-201ENSMUST00000035283 Usp12Q9D9M2 370 aa13.12□□□□□ -0.31
Nup88-201ENSMUST00000035283 Clca3a1Q9QX15 902 aa13.12□□□□□ -0.31
Nup88-201ENSMUST00000035283 Gm31371A0A1D5RM70 265 aa13.12□□□□□ -0.31
Nup88-201ENSMUST00000035283 Akap17bA2A3V1 959 aa13.12□□□□□ -0.31
Nup88-201ENSMUST00000035283 Olfr1303A2AVW1 312 aa13.12□□□□□ -0.31
Nup88-201ENSMUST00000035283 Man2b1O09159 1013 aa13.12□□□□□ -0.31
Nup88-201ENSMUST00000035283 Gnpda1O88958 289 aa13.12□□□□□ -0.31
Nup88-201ENSMUST00000035283 HmgclP38060 325 aa13.12□□□□□ -0.31
Nup88-201ENSMUST00000035283 Idh2P54071 452 aaKnown RBP13.12□□□□□ -0.31
Nup88-201ENSMUST00000035283 Pfdn6Q03958 127 aa13.12□□□□□ -0.31
Nup88-201ENSMUST00000035283 Fubp3Q3TIX6 575 aaKnown RBP13.12□□□□□ -0.31
Nup88-201ENSMUST00000035283 Serac1Q3U213 654 aa13.12□□□□□ -0.31
Nup88-201ENSMUST00000035283 Nr2c1Q505F1 590 aa13.12□□□□□ -0.31
Nup88-201ENSMUST00000035283 Spata48Q5NC83 441 aa13.12□□□□□ -0.31
Nup88-201ENSMUST00000035283 Olfr1364Q5SZS9 314 aa13.12□□□□□ -0.31
Nup88-201ENSMUST00000035283 Adam2Q60718 735 aa13.12□□□□□ -0.31
Nup88-201ENSMUST00000035283 Hsd3b5Q61694 373 aa13.12□□□□□ -0.31
Nup88-201ENSMUST00000035283 Scn4bQ7M729 228 aa13.12□□□□□ -0.31
Nup88-201ENSMUST00000035283 Pcdh8Q7TSK3 1070 aa13.12□□□□□ -0.31
Nup88-201ENSMUST00000035283 Bend7Q8BSV3 434 aa13.12□□□□□ -0.31
Nup88-201ENSMUST00000035283 Vmn1r201Q8R262 300 aa13.12□□□□□ -0.31
Nup88-201ENSMUST00000035283 Fam20bQ8VCS3 409 aa13.12□□□□□ -0.31
Nup88-201ENSMUST00000035283 Olfr729Q8VET4 323 aa13.12□□□□□ -0.31
Nup88-201ENSMUST00000035283 Chil4Q91Z98 402 aa13.12□□□□□ -0.31
Nup88-201ENSMUST00000035283 Ndufb5Q9CQH3 189 aa13.12□□□□□ -0.31
Nup88-201ENSMUST00000035283 XpotQ9CRT8 963 aa13.12□□□□□ -0.31
Nup88-201ENSMUST00000035283 Plpp6Q9D4F2 292 aa13.12□□□□□ -0.31
Nup88-201ENSMUST00000035283 Cdc20Q9JJ66 499 aa13.12□□□□□ -0.31
Nup88-201ENSMUST00000035283 Fkbp9Q9Z247 570 aa13.12□□□□□ -0.31
Nup88-201ENSMUST00000035283 Gm6337K7N6X9 211 aa13.11□□□□□ -0.31
Nup88-201ENSMUST00000035283 Gm10324L7N208 604 aa13.11□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 34.3 ms