RNA–Protein interactions for RNA: ENSMUST00000021278.13

Ctc1-201, Transcript of CST complex subunit CTC1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ctc1, Length 4,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctc1-201ENSMUST00000021278 Scd4Q6T707 353 aa9.09□□□□□ -0.96
Ctc1-201ENSMUST00000021278 Prdx6bQ8BG37 224 aa9.09□□□□□ -0.96
Ctc1-201ENSMUST00000021278 GskipQ8BGR8 139 aa9.09□□□□□ -0.96
Ctc1-201ENSMUST00000021278 Nceh1Q8BLF1 408 aaKnown RBP9.09□□□□□ -0.96
Ctc1-201ENSMUST00000021278 Zim1Q8C393 579 aa9.09□□□□□ -0.96
Ctc1-201ENSMUST00000021278 Akr1c13Q8VC28 323 aa9.09□□□□□ -0.96
Ctc1-201ENSMUST00000021278 Slc22a19Q8VCA0 551 aa9.09□□□□□ -0.96
Ctc1-201ENSMUST00000021278 Pafah2Q8VDG7 390 aa9.09□□□□□ -0.96
Ctc1-201ENSMUST00000021278 Det1Q9D0A0 550 aa9.09□□□□□ -0.96
Ctc1-201ENSMUST00000021278 PrameQ9D4Z5 464 aa9.09□□□□□ -0.96
Ctc1-201ENSMUST00000021278 Il22bQ9JJY8 179 aa9.09□□□□□ -0.96
Ctc1-201ENSMUST00000021278 Zfp111Q9R164 701 aa9.09□□□□□ -0.96
Ctc1-201ENSMUST00000021278 Pcdhgb8A0A140LI48 931 aa9.08□□□□□ -0.96
Ctc1-201ENSMUST00000021278 Prrt4B2RU40 902 aa9.08□□□□□ -0.96
Ctc1-201ENSMUST00000021278 Gabrr3B2RXA8 464 aa9.08□□□□□ -0.96
Ctc1-201ENSMUST00000021278 Phf11cB4XVP9 339 aa9.08□□□□□ -0.96
Ctc1-201ENSMUST00000021278 A430078G23RikE9Q7Y4 484 aa9.08□□□□□ -0.96
Ctc1-201ENSMUST00000021278 Galnt9G3X942 604 aa9.08□□□□□ -0.96
Ctc1-201ENSMUST00000021278 MaffO54791 156 aa9.08□□□□□ -0.96
Ctc1-201ENSMUST00000021278 Mid1O70583 680 aa9.08□□□□□ -0.96
Ctc1-201ENSMUST00000021278 Alkbh1P0CB42 389 aa9.08□□□□□ -0.96
Ctc1-201ENSMUST00000021278 Icam1P13597 537 aaKnown RBP9.08□□□□□ -0.96
Ctc1-201ENSMUST00000021278 LipcP27656 510 aa9.08□□□□□ -0.96
Ctc1-201ENSMUST00000021278 Rln1P47932 185 aa9.08□□□□□ -0.96
Ctc1-201ENSMUST00000021278 Rab8aP55258 207 aa9.08□□□□□ -0.96
Ctc1-201ENSMUST00000021278 YwhaqP68254 245 aaKnown RBP9.08□□□□□ -0.96
Ctc1-201ENSMUST00000021278 Pip5k1bP70181 539 aa9.08□□□□□ -0.96
Ctc1-201ENSMUST00000021278 CrxosQ3UL53 246 aa9.08□□□□□ -0.96
Ctc1-201ENSMUST00000021278 Ms4a15Q3UPL6 245 aa9.08□□□□□ -0.96
Ctc1-201ENSMUST00000021278 Dyrk2Q5U4C9 599 aa9.08□□□□□ -0.96
Ctc1-201ENSMUST00000021278 Ddx4Q61496 702 aa9.08□□□□□ -0.96
Ctc1-201ENSMUST00000021278 Hsd3b5Q61694 373 aa9.08□□□□□ -0.96
Ctc1-201ENSMUST00000021278 Sqstm1Q64337 442 aaKnown RBP9.08□□□□□ -0.96
Ctc1-201ENSMUST00000021278 Ccdc117Q6PB51 277 aa9.08□□□□□ -0.96
Ctc1-201ENSMUST00000021278 Rps27lQ6ZWY3 84 aaKnown RBP9.08□□□□□ -0.96
Ctc1-201ENSMUST00000021278 Pcid2Q8BFV2 399 aaKnown RBP9.08□□□□□ -0.96
Ctc1-201ENSMUST00000021278 Fads1Q920L1 447 aa9.08□□□□□ -0.96
Ctc1-201ENSMUST00000021278 Rnf181Q9CY62 165 aa9.08□□□□□ -0.96
Ctc1-201ENSMUST00000021278 Oxct1Q9D0K2 520 aaKnown RBP9.08□□□□□ -0.96
Ctc1-201ENSMUST00000021278 PgcQ9D7R7 392 aa9.08□□□□□ -0.96
Ctc1-201ENSMUST00000021278 Mrpl4Q9DCU6 294 aaKnown RBP9.08□□□□□ -0.96
Ctc1-201ENSMUST00000021278 Nectin3Q9JLB9 549 aa9.08□□□□□ -0.96
Ctc1-201ENSMUST00000021278 Eya4Q9Z191 616 aa9.08□□□□□ -0.96
Ctc1-201ENSMUST00000021278 Btaf1E9QAE3 1848 aa9.08□□□□□ -0.96
Ctc1-201ENSMUST00000021278 Dlg5E9Q9R9 1921 aa9.08□□□□□ -0.96
Ctc1-201ENSMUST00000021278 Gm5678A0A1B0GRG8 277 aa9.08□□□□□ -0.96
Ctc1-201ENSMUST00000021278 Gm1330D3Z460 184 aa9.08□□□□□ -0.96
Ctc1-201ENSMUST00000021278 Vmn2r14E9Q759 848 aa9.08□□□□□ -0.96
Ctc1-201ENSMUST00000021278 4933402N22RikF7D1B3 190 aa9.08□□□□□ -0.96
Ctc1-201ENSMUST00000021278 Impa1O55023 277 aa9.08□□□□□ -0.96
Ctc1-201ENSMUST00000021278 Svs4P18419 113 aa9.08□□□□□ -0.96
Ctc1-201ENSMUST00000021278 Cyp17a1P27786 507 aa9.08□□□□□ -0.96
Ctc1-201ENSMUST00000021278 Stat5aP42230 793 aa9.08□□□□□ -0.96
Ctc1-201ENSMUST00000021278 Pi4k2aQ2TBE6 479 aa9.08□□□□□ -0.96
Ctc1-201ENSMUST00000021278 Meaf6Q2VPQ9 191 aa9.08□□□□□ -0.96
Ctc1-201ENSMUST00000021278 Zdhhc20Q5Y5T1 380 aa9.08□□□□□ -0.96
Ctc1-201ENSMUST00000021278 MarcoQ60754 518 aa9.08□□□□□ -0.96
Ctc1-201ENSMUST00000021278 TsnQ62348 228 aaKnown RBP9.08□□□□□ -0.96
Ctc1-201ENSMUST00000021278 Trpv1Q704Y3 839 aa9.08□□□□□ -0.96
Ctc1-201ENSMUST00000021278 Slc25a32Q8BMG8 316 aa9.08□□□□□ -0.96
Ctc1-201ENSMUST00000021278 Syne4Q8CII8 388 aa9.08□□□□□ -0.96
Ctc1-201ENSMUST00000021278 Batf2Q8R1H8 277 aa9.08□□□□□ -0.96
Ctc1-201ENSMUST00000021278 Elf5Q8VDK3 253 aa9.08□□□□□ -0.96
Ctc1-201ENSMUST00000021278 Tfap2dQ91ZK0 452 aa9.08□□□□□ -0.96
Ctc1-201ENSMUST00000021278 HlcsQ920N2 722 aa9.08□□□□□ -0.96
Ctc1-201ENSMUST00000021278 Slc41a3Q921R8 488 aa9.08□□□□□ -0.96
Ctc1-201ENSMUST00000021278 Ints11Q9CWS4 600 aa9.08□□□□□ -0.96
Ctc1-201ENSMUST00000021278 Arv1Q9D0U9 266 aa9.08□□□□□ -0.96
Ctc1-201ENSMUST00000021278 Noxred1Q9D3S5 366 aa9.08□□□□□ -0.96
Ctc1-201ENSMUST00000021278 Tlr5Q9JLF7 859 aa9.08□□□□□ -0.96
Ctc1-201ENSMUST00000021278 Aldh9a1Q9JLJ2 494 aa9.08□□□□□ -0.96
Ctc1-201ENSMUST00000021278 Psmd10Q9Z2X2 231 aa9.08□□□□□ -0.96
Ctc1-201ENSMUST00000021278 Myo18aQ9JMH9 2050 aaKnown RBP9.08□□□□□ -0.96
Ctc1-201ENSMUST00000021278 4933424G06RikA0A140LIP3 267 aa9.08□□□□□ -0.96
Ctc1-201ENSMUST00000021278 Gm4846B2RWH8 538 aa9.08□□□□□ -0.96
Ctc1-201ENSMUST00000021278 Pabpc4lG5E8X2 370 aa9.08□□□□□ -0.96
Ctc1-201ENSMUST00000021278 Tmem200cJ3QK46 637 aa9.08□□□□□ -0.96
Ctc1-201ENSMUST00000021278 EvlP70429 414 aa9.08□□□□□ -0.96
Ctc1-201ENSMUST00000021278 MplQ08351 625 aa9.08□□□□□ -0.96
Ctc1-201ENSMUST00000021278 Tmem173Q3TBT3 378 aa9.08□□□□□ -0.96
Ctc1-201ENSMUST00000021278 Entpd6Q3U0P5 455 aa9.08□□□□□ -0.96
Ctc1-201ENSMUST00000021278 Xrcc1Q60596 631 aa9.08□□□□□ -0.96
Ctc1-201ENSMUST00000021278 Oog2Q7TPX8 476 aa9.08□□□□□ -0.96
Ctc1-201ENSMUST00000021278 Q810M1 233 aa9.08□□□□□ -0.96
Ctc1-201ENSMUST00000021278 Cdadc1Q8BMD5 523 aa9.08□□□□□ -0.96
Ctc1-201ENSMUST00000021278 Q8BN57 294 aa9.08□□□□□ -0.96
Ctc1-201ENSMUST00000021278 Cndp1Q8BUG2 492 aa9.08□□□□□ -0.96
Ctc1-201ENSMUST00000021278 Pggt1bQ8BUY9 377 aa9.08□□□□□ -0.96
Ctc1-201ENSMUST00000021278 Pak5Q8C015 719 aa9.08□□□□□ -0.96
Ctc1-201ENSMUST00000021278 Adnp2Q8CHC8 1165 aaKnown RBP9.08□□□□□ -0.96
Ctc1-201ENSMUST00000021278 Sgpl1Q8R0X7 568 aa9.08□□□□□ -0.96
Ctc1-201ENSMUST00000021278 Rbms2Q8VC70 383 aaKnown RBP9.08□□□□□ -0.96
Ctc1-201ENSMUST00000021278 Ndufv1Q91YT0 464 aa9.08□□□□□ -0.96
Ctc1-201ENSMUST00000021278 Diras1Q91Z61 198 aa9.08□□□□□ -0.96
Ctc1-201ENSMUST00000021278 Chil4Q91Z98 402 aa9.08□□□□□ -0.96
Ctc1-201ENSMUST00000021278 Tex46Q9CPU3 165 aa9.08□□□□□ -0.96
Ctc1-201ENSMUST00000021278 Hhipl2Q9D2G9 717 aa9.08□□□□□ -0.96
Ctc1-201ENSMUST00000021278 Six6Q9QZ28 246 aa9.08□□□□□ -0.96
Ctc1-201ENSMUST00000021278 Olfr1224-ps1A3KGY4 311 aa9.07□□□□□ -0.96
Ctc1-201ENSMUST00000021278 Otud3B1AZ99 396 aa9.07□□□□□ -0.96
Retrieved 100 of 22,080 RNA–protein pairs in 20.4 ms