RNA–Protein interactions for RNA: ENST00000640653.1

VEGFA-232, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-232ENST00000640653 FAM198BQ6UWH4 519 aa24.29■■□□□ 1.48
VEGFA-232ENST00000640653 MAGEC3Q8TD91 643 aa24.29■■□□□ 1.48
VEGFA-232ENST00000640653 ZNF669Q96BR6 464 aaPredicted RBP24.29■■□□□ 1.48
VEGFA-232ENST00000640653 SERPINB12Q96P63 405 aa24.29■■□□□ 1.48
VEGFA-232ENST00000640653 IL17FQ96PD4 163 aa24.29■■□□□ 1.48
VEGFA-232ENST00000640653 C17orf62Q9BQA9 187 aa24.29■■□□□ 1.48
VEGFA-232ENST00000640653 TRIM4Q9C037 500 aa24.29■■□□□ 1.48
VEGFA-232ENST00000640653 INTS10Q9NVR2 710 aaKnown RBP24.29■■□□□ 1.48
VEGFA-232ENST00000640653 IRAK4Q9NWZ3 460 aa24.29■■□□□ 1.48
VEGFA-232ENST00000640653 CAMSAP3Q9P1Y5 1249 aaPredicted RBP24.29■■□□□ 1.48
VEGFA-232ENST00000640653 ANAPC2Q9UJX6 822 aa24.29■■□□□ 1.48
VEGFA-232ENST00000640653 TCFL5Q9UL49 500 aa24.29■■□□□ 1.48
VEGFA-232ENST00000640653 PLCL2Q9UPR0 1127 aa24.29■■□□□ 1.48
VEGFA-232ENST00000640653 CRYL1Q9Y2S2 319 aa24.29■■□□□ 1.48
VEGFA-232ENST00000640653 GOLGA8MH3BSY2 632 aa24.28■■□□□ 1.48
VEGFA-232ENST00000640653 PYCARD-AS1I3L0S3 204 aa24.28■■□□□ 1.48
VEGFA-232ENST00000640653 ZSCAN9O15535 394 aaPredicted RBP24.28■■□□□ 1.48
VEGFA-232ENST00000640653 WISP1O95388 367 aa24.28■■□□□ 1.48
VEGFA-232ENST00000640653 MAGP20916 626 aa24.28■■□□□ 1.48
VEGFA-232ENST00000640653 ANKRD20A4Q4UJ75 823 aa24.28■■□□□ 1.48
VEGFA-232ENST00000640653 TLDC1Q6P9B6 456 aa24.28■■□□□ 1.48
VEGFA-232ENST00000640653 TAX1BP1Q86VP1 789 aa24.28■■□□□ 1.48
VEGFA-232ENST00000640653 CILP2Q8IUL8 1156 aa24.28■■□□□ 1.48
VEGFA-232ENST00000640653 DNAJC22Q8N4W6 341 aa24.28■■□□□ 1.48
VEGFA-232ENST00000640653 C2orf73Q8N5S3 287 aaPredicted RBP24.28■■□□□ 1.48
VEGFA-232ENST00000640653 SPRTNQ9H040 489 aaPredicted RBP24.28■■□□□ 1.48
VEGFA-232ENST00000640653 SNX12Q9UMY4 172 aa24.28■■□□□ 1.48
VEGFA-232ENST00000640653 SRPK3Q9UPE1 567 aa24.28■■□□□ 1.48
VEGFA-232ENST00000640653 TP53TG5Q9Y2B4 290 aa24.28■■□□□ 1.48
VEGFA-232ENST00000640653 PADI2Q9Y2J8 665 aa24.28■■□□□ 1.48
VEGFA-232ENST00000640653 NFS1Q9Y697 457 aa24.28■■□□□ 1.48
VEGFA-232ENST00000640653 H3BMH7 237 aa24.27■■□□□ 1.48
VEGFA-232ENST00000640653 HCRTR1O43613 425 aa24.27■■□□□ 1.48
VEGFA-232ENST00000640653 NIPSNAP2O75323 286 aa24.27■■□□□ 1.48
VEGFA-232ENST00000640653 FKBP9O95302 570 aa24.27■■□□□ 1.48
VEGFA-232ENST00000640653 CAPN1P07384 714 aa24.27■■□□□ 1.48
VEGFA-232ENST00000640653 CHRM3P20309 590 aa24.27■■□□□ 1.48
VEGFA-232ENST00000640653 ATP5DP30049 168 aa24.27■■□□□ 1.48
VEGFA-232ENST00000640653 KCNC4Q03721 635 aa24.27■■□□□ 1.48
VEGFA-232ENST00000640653 THOC5Q13769 683 aaKnown RBP24.27■■□□□ 1.48
VEGFA-232ENST00000640653 NCF4Q15080 339 aa24.27■■□□□ 1.48
VEGFA-232ENST00000640653 SF1Q15637 639 aaKnown RBP24.27■■□□□ 1.48
VEGFA-232ENST00000640653 ZNF385CQ66K41 422 aaPredicted RBP24.27■■□□□ 1.48
VEGFA-232ENST00000640653 RHBDD2Q6NTF9 364 aa24.27■■□□□ 1.48
VEGFA-232ENST00000640653 TCTN3Q6NUS6 607 aa24.27■■□□□ 1.48
VEGFA-232ENST00000640653 CNSTQ6PJW8 725 aa24.27■■□□□ 1.48
VEGFA-232ENST00000640653 FAM20CQ8IXL6 584 aa24.27■■□□□ 1.48
VEGFA-232ENST00000640653 PROKR1Q8TCW9 393 aa24.27■■□□□ 1.48
VEGFA-232ENST00000640653 DHRS4Q9BTZ2 278 aa24.27■■□□□ 1.48
VEGFA-232ENST00000640653 TRMT1Q9NXH9 659 aaKnown RBP24.27■■□□□ 1.48
VEGFA-232ENST00000640653 TLK1Q9UKI8 766 aa24.27■■□□□ 1.48
VEGFA-232ENST00000640653 E5RI56 91 aa24.26■■□□□ 1.47
VEGFA-232ENST00000640653 ZIC2O95409 532 aaPredicted RBP24.26■■□□□ 1.47
VEGFA-232ENST00000640653 PKMP14618 531 aaKnown RBP24.26■■□□□ 1.47
VEGFA-232ENST00000640653 BDKRB1P46663 353 aa24.26■■□□□ 1.47
VEGFA-232ENST00000640653 CSRP3P50461 194 aa24.26■■□□□ 1.47
VEGFA-232ENST00000640653 ZNF470Q6ECI4 717 aa24.26■■□□□ 1.47
VEGFA-232ENST00000640653 CENPUQ71F23 418 aa24.26■■□□□ 1.47
VEGFA-232ENST00000640653 ZNF655Q8N720 491 aaPredicted RBP24.26■■□□□ 1.47
VEGFA-232ENST00000640653 NAT8LQ8N9F0 302 aa24.26■■□□□ 1.47
VEGFA-232ENST00000640653 LMNTD1Q8N9Z9 388 aa24.26■■□□□ 1.47
VEGFA-232ENST00000640653 TRIM56Q9BRZ2 755 aaKnown RBP24.26■■□□□ 1.47
VEGFA-232ENST00000640653 KCNF1Q9H3M0 494 aa24.26■■□□□ 1.47
VEGFA-232ENST00000640653 TXLNGQ9NUQ3 528 aa24.26■■□□□ 1.47
VEGFA-232ENST00000640653 EURLQ9NYK6 297 aa24.26■■□□□ 1.47
VEGFA-232ENST00000640653 HELZ2Q9BYK8 2649 aaKnown RBP24.26■■□□□ 1.47
VEGFA-232ENST00000640653 CTAGE9A4FU28 777 aa24.25■■□□□ 1.47
VEGFA-232ENST00000640653 MAGEA3P43357 314 aa24.25■■□□□ 1.47
VEGFA-232ENST00000640653 TLE1Q04724 770 aa24.25■■□□□ 1.47
VEGFA-232ENST00000640653 GBX1Q14549 363 aa24.25■■□□□ 1.47
VEGFA-232ENST00000640653 PPP1R7Q15435 360 aa24.25■■□□□ 1.47
VEGFA-232ENST00000640653 PPIL6Q8IXY8 311 aa24.25■■□□□ 1.47
VEGFA-232ENST00000640653 ZBTB2Q8N680 514 aa24.25■■□□□ 1.47
VEGFA-232ENST00000640653 ADAMTS17Q8TE56 1095 aa24.25■■□□□ 1.47
VEGFA-232ENST00000640653 FAM136AQ96C01 138 aa24.25■■□□□ 1.47
VEGFA-232ENST00000640653 NDC1Q9BTX1 674 aa24.25■■□□□ 1.47
VEGFA-232ENST00000640653 CLMPQ9H6B4 373 aa24.25■■□□□ 1.47
VEGFA-232ENST00000640653 ACSS2Q9NR19 701 aa24.25■■□□□ 1.47
VEGFA-232ENST00000640653 IL1RAPL1Q9NZN1 696 aa24.25■■□□□ 1.47
VEGFA-232ENST00000640653 SPATA7Q9P0W8 599 aa24.25■■□□□ 1.47
VEGFA-232ENST00000640653 GPN3Q9UHW5 284 aaPredicted RBP24.25■■□□□ 1.47
VEGFA-232ENST00000640653 TSR3Q9UJK0 312 aaKnown RBP24.25■■□□□ 1.47
VEGFA-232ENST00000640653 RUVBL2Q9Y230 463 aaKnown RBP24.25■■□□□ 1.47
VEGFA-232ENST00000640653 KLHL20Q9Y2M5 609 aa24.25■■□□□ 1.47
VEGFA-232ENST00000640653 MAD1L1Q9Y6D9 718 aa24.25■■□□□ 1.47
VEGFA-232ENST00000640653 ARGFXA6NJG6 315 aa24.24■■□□□ 1.47
VEGFA-232ENST00000640653 USP1O94782 785 aa24.24■■□□□ 1.47
VEGFA-232ENST00000640653 CD63P08962 238 aa24.24■■□□□ 1.47
VEGFA-232ENST00000640653 CBSLP0DN79 551 aa24.24■■□□□ 1.47
VEGFA-232ENST00000640653 CBSP35520 551 aa24.24■■□□□ 1.47
VEGFA-232ENST00000640653 CASRP41180 1078 aa24.24■■□□□ 1.47
VEGFA-232ENST00000640653 DCDP81605 110 aaKnown RBP24.24■■□□□ 1.47
VEGFA-232ENST00000640653 KLRB1Q12918 225 aa24.24■■□□□ 1.47
VEGFA-232ENST00000640653 ZC3H12BQ5HYM0 836 aaKnown RBP24.24■■□□□ 1.47
VEGFA-232ENST00000640653 C1orf189Q5VU69 101 aa24.24■■□□□ 1.47
VEGFA-232ENST00000640653 FIGLAQ6QHK4 219 aa24.24■■□□□ 1.47
VEGFA-232ENST00000640653 MCATQ8IVS2 390 aaKnown RBP24.24■■□□□ 1.47
VEGFA-232ENST00000640653 LMNTD2Q8IXW0 634 aa24.24■■□□□ 1.47
VEGFA-232ENST00000640653 HMGCLL1Q8TB92 370 aa24.24■■□□□ 1.47
VEGFA-232ENST00000640653 DLG3Q92796 817 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms