RNA–Protein interactions for RNA: ENST00000640036.1

SCN1A-218, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,131 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-218ENST00000640036 MYO7BQ6PIF6 2116 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 SCN11AQ9UI33 1791 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 CACNA1HO95180 2353 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 DOCK8Q8NF50 2099 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 IGKV6D-41A0A0C4DH26 115 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 STMND1H3BQB6 276 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 AREL1O15033 823 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 ZBTB22O15209 634 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 OAZ2O95190 189 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 MTHFD2P13995 350 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 PLK1P53350 603 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 GSTM4Q03013 218 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 TNK2Q07912 1038 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 EFR3AQ14156 821 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 KPNB1Q14974 876 aaKnown RBP4.91□□□□□ -1.62
SCN1A-218ENST00000640036 C14orf28Q4W4Y0 310 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 CLLU1OSQ5K130 101 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 SLC8B1Q6J4K2 584 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 KCTD8Q6ZWB6 473 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 THAP5Q7Z6K1 395 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 TMEM200AQ86VY9 491 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 OR6N1Q8NGY5 312 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.91□□□□□ -1.62
SCN1A-218ENST00000640036 IFI44Q8TCB0 444 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 NDRG1Q92597 394 aaKnown RBP4.91□□□□□ -1.62
SCN1A-218ENST00000640036 CASD1Q96PB1 797 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 TUBA8Q9NY65 449 aaPredicted RBP4.91□□□□□ -1.62
SCN1A-218ENST00000640036 ZNF624Q9P2J8 865 aaPredicted RBP4.91□□□□□ -1.62
SCN1A-218ENST00000640036 AMACRQ9UHK6 382 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 MMP17Q9ULZ9 603 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 PCDHGA11Q9Y5H2 935 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 CACNA1CQ13936 2221 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 NACAE9PAV3 2078 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 COL2A1P02458 1487 aaPredicted RBP4.91□□□□□ -1.62
SCN1A-218ENST00000640036 RBM47A0AV96 593 aaKnown RBP4.91□□□□□ -1.62
SCN1A-218ENST00000640036 MATN3O15232 486 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 IFNGP01579 166 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 CXCR1P25024 350 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 OAS2P29728 719 aaKnown RBP4.91□□□□□ -1.62
SCN1A-218ENST00000640036 TMPRSS3P57727 454 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 ZNF33BQ06732 778 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 PPP3CAQ08209 521 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 HYAL2Q12891 473 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 NR1I3Q14994 352 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 TSNQ15631 228 aaKnown RBP4.91□□□□□ -1.62
SCN1A-218ENST00000640036 GFRALQ6UXV0 394 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 MRPL10Q7Z7H8 261 aaKnown RBP4.91□□□□□ -1.62
SCN1A-218ENST00000640036 METTL16Q86W50 562 aaKnown RBP4.91□□□□□ -1.62
SCN1A-218ENST00000640036 CCDC103Q8IW40 242 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 ZDHHC14Q8IZN3 488 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 GPR151Q8TDV0 419 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 ZNF483Q8TF39 744 aaPredicted RBP4.91□□□□□ -1.62
SCN1A-218ENST00000640036 RGMAQ96B86 450 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 ITCHQ96J02 903 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 MS4A14Q96JA4 679 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 C9orf72Q96LT7 481 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 PPP3R2Q96LZ3 170 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 TCF12Q99081 682 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 SMOC2Q9H3U7 446 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 BLOC1S4Q9NUP1 217 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 HSFX1Q9UBD0 423 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 CFAP20Q9Y6A4 193 aaKnown RBP4.91□□□□□ -1.62
SCN1A-218ENST00000640036 TISP43B9A030 160 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 ZNF208O43345 1280 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 SNAP91O60641 907 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 NTRK1P04629 796 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 ADRB2P07550 413 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 CPA3P15088 417 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 S100A7P31151 101 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 IL12RB1P42701 662 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 ARFIP2P53365 341 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 GPLD1P80108 840 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 MYBPC1Q00872 1141 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 C2orf80Q0P641 193 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 LRP8Q14114 963 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 RASA2Q15283 850 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 HNRNPA1L2Q32P51 320 aaKnown RBP4.91□□□□□ -1.62
SCN1A-218ENST00000640036 NOXRED1Q6NXP6 359 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 PHB2Q99623 299 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 COQ7Q99807 217 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 TCF20Q9UGU0 1960 aaKnown RBP4.91□□□□□ -1.62
SCN1A-218ENST00000640036 CADP27708 2225 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 TRIM49D1C9J1S8 452 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 RAD51CO43502 376 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 CYP17A1P05093 508 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 ZNF37AP17032 561 aaPredicted RBP4.91□□□□□ -1.62
SCN1A-218ENST00000640036 CD40LGP29965 261 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 PTGER3P43115 390 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 CRATP43155 626 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 RGS8P57771 180 aaPredicted RBP4.91□□□□□ -1.62
SCN1A-218ENST00000640036 RASGEF1BQ0VAM2 473 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 COX10Q12887 443 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 SOWAHAQ2M3V2 549 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 TMEM35AQ53FP2 167 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 OTUD3Q5T2D3 398 aaPredicted RBP4.91□□□□□ -1.62
SCN1A-218ENST00000640036 TRIQKQ629K1 86 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 PARM1Q6UWI2 310 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 CDH24Q86UP0 819 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 MIER2Q8N344 545 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 MFSD2AQ8NA29 543 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 185.1 ms