RNA–Protein interactions for RNA: ENST00000638375.1

HLA-A-209, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 975 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-209ENST00000638375 STOX2Q9P2F5 926 aaPredicted RBP18.8■□□□□ 0.6
HLA-A-209ENST00000638375 COL27A1Q8IZC6 1860 aaPredicted RBP18.8■□□□□ 0.6
HLA-A-209ENST00000638375 RGS16O15492 202 aaPredicted RBP18.79■□□□□ 0.6
HLA-A-209ENST00000638375 KERAO60938 352 aa18.79■□□□□ 0.6
HLA-A-209ENST00000638375 GUCA1CO95843 209 aa18.79■□□□□ 0.6
HLA-A-209ENST00000638375 HIST1H2AGP0C0S8 130 aaPredicted RBP18.79■□□□□ 0.6
HLA-A-209ENST00000638375 CDK4P11802 303 aa18.79■□□□□ 0.6
HLA-A-209ENST00000638375 HIST1H2ADP20671 130 aa18.79■□□□□ 0.6
HLA-A-209ENST00000638375 PDX1P52945 283 aa18.79■□□□□ 0.6
HLA-A-209ENST00000638375 PNLIPRP1P54315 467 aa18.79■□□□□ 0.6
HLA-A-209ENST00000638375 CDKL1Q00532 357 aa18.79■□□□□ 0.6
HLA-A-209ENST00000638375 SLC18A2Q05940 514 aa18.79■□□□□ 0.6
HLA-A-209ENST00000638375 SPIDRQ14159 915 aa18.79■□□□□ 0.6
HLA-A-209ENST00000638375 ARHGAP19Q14CB8 494 aa18.79■□□□□ 0.6
HLA-A-209ENST00000638375 TGFBIQ15582 683 aa18.79■□□□□ 0.6
HLA-A-209ENST00000638375 CLPPQ16740 277 aaPredicted RBP18.79■□□□□ 0.6
HLA-A-209ENST00000638375 ZXDCQ2QGD7 858 aaPredicted RBP18.79■□□□□ 0.6
HLA-A-209ENST00000638375 TSNAXIP1Q2TAA8 658 aa18.79■□□□□ 0.6
HLA-A-209ENST00000638375 TECRLQ5HYJ1 363 aa18.79■□□□□ 0.6
HLA-A-209ENST00000638375 CDCP2Q5VXM1 449 aa18.79■□□□□ 0.6
HLA-A-209ENST00000638375 ANKS6Q68DC2 871 aa18.79■□□□□ 0.6
HLA-A-209ENST00000638375 KLC3Q6P597 504 aa18.79■□□□□ 0.6
HLA-A-209ENST00000638375 WDR74Q6RFH5 385 aaPredicted RBP18.79■□□□□ 0.6
HLA-A-209ENST00000638375 ZNF574Q6ZN55 896 aaPredicted RBP18.79■□□□□ 0.6
HLA-A-209ENST00000638375 FRA10AC1Q70Z53 315 aa18.79■□□□□ 0.6
HLA-A-209ENST00000638375 GPSM1Q86YR5 675 aa18.79■□□□□ 0.6
HLA-A-209ENST00000638375 C4orf33Q8N1A6 199 aa18.79■□□□□ 0.6
HLA-A-209ENST00000638375 RAB42Q8N4Z0 105 aa18.79■□□□□ 0.6
HLA-A-209ENST00000638375 PPFIBP2Q8ND30 876 aa18.79■□□□□ 0.6
HLA-A-209ENST00000638375 RHEBL1Q8TAI7 183 aa18.79■□□□□ 0.6
HLA-A-209ENST00000638375 STAG3L4Q8TBR4 150 aa18.79■□□□□ 0.6
HLA-A-209ENST00000638375 HIST1H2AHQ96KK5 128 aa18.79■□□□□ 0.6
HLA-A-209ENST00000638375 HIST1H2AJQ99878 128 aa18.79■□□□□ 0.6
HLA-A-209ENST00000638375 H2AFJQ9BTM1 129 aa18.79■□□□□ 0.6
HLA-A-209ENST00000638375 TRIM54Q9BYV2 358 aa18.79■□□□□ 0.6
HLA-A-209ENST00000638375 RAB33BQ9H082 229 aa18.79■□□□□ 0.6
HLA-A-209ENST00000638375 ARL15Q9NXU5 204 aa18.79■□□□□ 0.6
HLA-A-209ENST00000638375 EPHA6Q9UF33 1036 aa18.79■□□□□ 0.6
HLA-A-209ENST00000638375 LNPEPQ9UIQ6 1025 aa18.79■□□□□ 0.6
HLA-A-209ENST00000638375 RNF112Q9ULX5 631 aa18.79■□□□□ 0.6
HLA-A-209ENST00000638375 CNOT1A5YKK6 2376 aaKnown RBP18.78■□□□□ 0.6
HLA-A-209ENST00000638375 MN1Q10571 1320 aaPredicted RBP18.78■□□□□ 0.6
HLA-A-209ENST00000638375 A0A1W2PPV9 198 aa18.78■□□□□ 0.6
HLA-A-209ENST00000638375 E7ENX8 843 aa18.78■□□□□ 0.6
HLA-A-209ENST00000638375 AGPSO00116 658 aa18.78■□□□□ 0.6
HLA-A-209ENST00000638375 CAPN5O15484 640 aaPredicted RBP18.78■□□□□ 0.6
HLA-A-209ENST00000638375 C9P02748 559 aa18.78■□□□□ 0.6
HLA-A-209ENST00000638375 KRT4P19013 534 aa18.78■□□□□ 0.6
HLA-A-209ENST00000638375 MPSTP25325 297 aa18.78■□□□□ 0.6
HLA-A-209ENST00000638375 TAP2Q03519 686 aa18.78■□□□□ 0.6
HLA-A-209ENST00000638375 TNFAIP8L3Q5GJ75 292 aa18.78■□□□□ 0.6
HLA-A-209ENST00000638375 HES3Q5TGS1 186 aa18.78■□□□□ 0.6
HLA-A-209ENST00000638375 IRGCQ6NXR0 463 aa18.78■□□□□ 0.6
HLA-A-209ENST00000638375 TMEM71Q6P5X7 295 aa18.78■□□□□ 0.6
HLA-A-209ENST00000638375 CDHR3Q6ZTQ4 885 aa18.78■□□□□ 0.6
HLA-A-209ENST00000638375 HDXQ7Z353 690 aa18.78■□□□□ 0.6
HLA-A-209ENST00000638375 CROCCP2Q86T23 111 aa18.78■□□□□ 0.6
HLA-A-209ENST00000638375 SLITRK4Q8IW52 837 aa18.78■□□□□ 0.6
HLA-A-209ENST00000638375 FLVCR1-AS1Q8TAF5 88 aa18.78■□□□□ 0.6
HLA-A-209ENST00000638375 EXT2Q93063 718 aa18.78■□□□□ 0.6
HLA-A-209ENST00000638375 FBXL8Q96CD0 374 aa18.78■□□□□ 0.6
HLA-A-209ENST00000638375 TSNARE1Q96NA8 513 aa18.78■□□□□ 0.6
HLA-A-209ENST00000638375 ZMYND15Q9H091 742 aa18.78■□□□□ 0.6
HLA-A-209ENST00000638375 ACTR10Q9NZ32 417 aa18.78■□□□□ 0.6
HLA-A-209ENST00000638375 TMEM216Q9P0N5 145 aa18.78■□□□□ 0.6
HLA-A-209ENST00000638375 XPR1Q9UBH6 696 aa18.78■□□□□ 0.6
HLA-A-209ENST00000638375 CCDC189A1A4V9 331 aa18.77■□□□□ 0.6
HLA-A-209ENST00000638375 PIPSLA2A3N6 862 aa18.77■□□□□ 0.6
HLA-A-209ENST00000638375 GSAPA4D1B5 854 aa18.77■□□□□ 0.6
HLA-A-209ENST00000638375 PABPN1LA6NDY0 278 aaKnown RBP18.77■□□□□ 0.6
HLA-A-209ENST00000638375 NCF1BA6NI72 391 aaPredicted RBP18.77■□□□□ 0.6
HLA-A-209ENST00000638375 NCF1CA8MVU1 366 aaPredicted RBP18.77■□□□□ 0.6
HLA-A-209ENST00000638375 UBXN8O00124 270 aa18.77■□□□□ 0.6
HLA-A-209ENST00000638375 PRICKLE3O43900 615 aaPredicted RBP18.77■□□□□ 0.6
HLA-A-209ENST00000638375 MTHFD2P13995 350 aa18.77■□□□□ 0.6
HLA-A-209ENST00000638375 NCF1P14598 390 aaPredicted RBP18.77■□□□□ 0.6
HLA-A-209ENST00000638375 HSD17B2P37059 387 aa18.77■□□□□ 0.6
HLA-A-209ENST00000638375 ID4P47928 161 aa18.77■□□□□ 0.6
HLA-A-209ENST00000638375 KPNA2P52292 529 aaKnown RBP18.77■□□□□ 0.6
HLA-A-209ENST00000638375 PRKAA1Q13131 559 aa18.77■□□□□ 0.6
HLA-A-209ENST00000638375 ARMC6Q6NXE6 501 aa18.77■□□□□ 0.6
HLA-A-209ENST00000638375 AGTRAPQ6RW13 159 aa18.77■□□□□ 0.6
HLA-A-209ENST00000638375 RBM44Q6ZP01 1051 aaKnown RBP18.77■□□□□ 0.6
HLA-A-209ENST00000638375 B3GNT8Q7Z7M8 397 aa18.77■□□□□ 0.6
HLA-A-209ENST00000638375 LCA5Q86VQ0 697 aa18.77■□□□□ 0.6
HLA-A-209ENST00000638375 PLXDC1Q8IUK5 500 aa18.77■□□□□ 0.6
HLA-A-209ENST00000638375 SRRM1Q8IYB3 904 aaKnown RBP18.77■□□□□ 0.6
HLA-A-209ENST00000638375 SYTL1Q8IYJ3 562 aa18.77■□□□□ 0.6
HLA-A-209ENST00000638375 TMEM151AQ8N4L1 468 aa18.77■□□□□ 0.6
HLA-A-209ENST00000638375 OR4D9Q8NGE8 314 aa18.77■□□□□ 0.6
HLA-A-209ENST00000638375 ADAMTS14Q8WXS8 1223 aa18.77■□□□□ 0.6
HLA-A-209ENST00000638375 PGM2Q96G03 612 aa18.77■□□□□ 0.6
HLA-A-209ENST00000638375 SCYL1Q96KG9 808 aa18.77■□□□□ 0.6
HLA-A-209ENST00000638375 PPM1MQ96MI6 270 aa18.77■□□□□ 0.6
HLA-A-209ENST00000638375 TGM7Q96PF1 710 aa18.77■□□□□ 0.6
HLA-A-209ENST00000638375 EGFL8Q99944 293 aa18.77■□□□□ 0.6
HLA-A-209ENST00000638375 DPYSL5Q9BPU6 564 aa18.77■□□□□ 0.6
HLA-A-209ENST00000638375 ATG10Q9H0Y0 220 aa18.77■□□□□ 0.6
HLA-A-209ENST00000638375 CENPHQ9H3R5 247 aa18.77■□□□□ 0.6
HLA-A-209ENST00000638375 SEMA6CQ9H3T2 930 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms