RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 CAMK2DQ13557 499 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 PDK3Q15120 406 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 PDGFRLQ15198 375 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 KLHL36Q8N4N3 616 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 HORMAD2Q8N7B1 307 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 THEM6Q8WUY1 208 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 ELMO3Q96BJ8 720 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 C17orf62Q9BQA9 187 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 NAA11Q9BSU3 229 aaPredicted RBP5.45□□□□□ -1.54
SCN1A-209ENST00000635750 SNX15Q9NRS6 342 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 P2RX2Q9UBL9 471 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 NEXMIFQ5QGS0 1516 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 GPR89AB7ZAQ6 455 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 GNB5O14775 395 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 SNAPC5O75971 98 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 GADD45GO95257 159 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 CPNE6O95741 557 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 CCNE2O96020 404 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 IL1AP01583 271 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 C8AP07357 584 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 ALPIP09923 528 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 GPR89BP0CG08 455 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 EDNRAP25101 427 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 ACSL1P33121 698 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 ABCG1P45844 678 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 OR12D2P58182 307 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 AIMP2Q13155 320 aaKnown RBP5.45□□□□□ -1.54
SCN1A-209ENST00000635750 SEC23BQ15437 767 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 PDK4Q16654 411 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 IL23RQ5VWK5 629 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 LRRC66Q68CR7 880 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 C1orf94Q6P1W5 598 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 ERN2Q76MJ5 926 aaKnown RBP5.45□□□□□ -1.54
SCN1A-209ENST00000635750 OR8H1Q8NGG4 311 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 GRHL3Q8TE85 626 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 STK32AQ8WU08 396 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 IRGQQ8WZA9 623 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 SIPA1Q96FS4 1042 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 CHIAQ9BZP6 476 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 BTBD1Q9H0C5 482 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 PRDM12Q9H4Q4 367 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 BRD7Q9NPI1 651 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 MAGEB17A8MXT2 336 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 NRP2O60462 931 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 KCNJ13O60928 360 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 LGR5O75473 907 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 RAD51DO75771 328 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 GSTT2P0CG29 244 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 ADH5P11766 374 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 ZNF8P17098 575 aaPredicted RBP5.45□□□□□ -1.54
SCN1A-209ENST00000635750 TACR2P21452 398 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 GRM5P41594 1212 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 EIF1AXP47813 144 aaKnown RBP5.45□□□□□ -1.54
SCN1A-209ENST00000635750 GABRB2P47870 512 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 YBEYP58557 167 aaPredicted RBP5.45□□□□□ -1.54
SCN1A-209ENST00000635750 RPS15P62841 145 aaKnown RBP5.45□□□□□ -1.54
SCN1A-209ENST00000635750 MERTKQ12866 999 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 MELKQ14680 651 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 GRIK5Q16478 980 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 AADACL4Q5VUY2 407 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 MBOAT1Q6ZNC8 495 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 NAXEQ8NCW5 288 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 OR52J3Q8NH60 311 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 MAGEH1Q9H213 219 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 ABCC3O15438 1527 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 TEX13DA0A0J9YY54 714 aaPredicted RBP5.45□□□□□ -1.54
SCN1A-209ENST00000635750 MATN2O00339 956 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 EIF1AYO14602 144 aaKnown RBP5.45□□□□□ -1.54
SCN1A-209ENST00000635750 LAMTOR5O43504 91 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 OAZ2O95190 189 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 NADKO95544 446 aaPredicted RBP5.45□□□□□ -1.54
SCN1A-209ENST00000635750 ELNP15502 786 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 TNFSF4P23510 183 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 PRKCHP24723 683 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 RORCP51449 518 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 CLCN4P51793 760 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 TARDBPQ13148 414 aaKnown RBP eCLIP5.45□□□□□ -1.54
SCN1A-209ENST00000635750 GPR68Q15743 365 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 LRRC38Q5VT99 294 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 TMEM225Q6GV28 225 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 USP49Q70CQ1 688 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 KREMEN2Q8NCW0 462 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 TMIEQ8NEW7 156 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 SPATA22Q8NHS9 363 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 FAM110BQ8TC76 370 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 GTPBP3Q969Y2 492 aaKnown RBP5.45□□□□□ -1.54
SCN1A-209ENST00000635750 SLC7A6OSQ96CW6 309 aaPredicted RBP5.45□□□□□ -1.54
SCN1A-209ENST00000635750 RHOJQ9H4E5 214 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 RMI1Q9H9A7 625 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 PLEKHA3Q9HB20 300 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 SNTG1Q9NSN8 517 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 VNN3Q9NY84 501 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 PRDM15P57071 1507 aaPredicted RBP5.44□□□□□ -1.54
SCN1A-209ENST00000635750 IQCF5A8MTL0 148 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 KHNYNO15037 678 aaKnown RBP5.44□□□□□ -1.54
SCN1A-209ENST00000635750 RAC2P15153 192 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 RHOQP17081 205 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 LHCGRP22888 699 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 CSTF1Q05048 431 aaKnown RBP5.44□□□□□ -1.54
SCN1A-209ENST00000635750 RBPJQ06330 500 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms