RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 GALCP54803 685 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 LRRC63Q05C16 580 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 NFATC3Q12968 1075 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 TTLL4Q14679 1199 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 MAPK11Q15759 364 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 SSX2Q16385 188 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 CDO1Q16878 200 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 PNLIPRP3Q17RR3 467 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 SLC5A12Q1EHB4 618 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 BTBD8Q5XKL5 378 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 KRT39Q6A163 491 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 NEPROQ6NW34 567 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 SELENOHQ8IZQ5 122 aaKnown RBP4.74□□□□□ -1.65
SDCBP-213ENST00000630925 LIX1Q8N485 282 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 Q8NA96 180 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 HJURPQ8NCD3 748 aaPredicted RBP4.74□□□□□ -1.65
SDCBP-213ENST00000630925 OR13F1Q8NGS4 319 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 NSMCE1Q8WV22 266 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 CACNG8Q8WXS5 425 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 GTF3C6Q969F1 213 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 SLC25A28Q96A46 364 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 ARRDC3Q96B67 414 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 AP2M1Q96CW1 435 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 C4orf36Q96KX1 117 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 PPP1R36Q96LQ0 422 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 LURAP1Q96LR2 239 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 FOXN4Q96NZ1 517 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 MXRA8Q9BRK3 442 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 EFHD1Q9BUP0 239 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 CLPBQ9H078 707 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 DHX33Q9H6R0 707 aaKnown RBP4.74□□□□□ -1.65
SDCBP-213ENST00000630925 GEMIN7Q9H840 131 aaKnown RBP4.74□□□□□ -1.65
SDCBP-213ENST00000630925 NOL11Q9H8H0 719 aaKnown RBP4.74□□□□□ -1.65
SDCBP-213ENST00000630925 NT5MQ9NPB1 228 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 ZFP57Q9NU63 452 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 ELOVL2Q9NXB9 296 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 SNX7Q9UNH6 387 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 ZNF148Q9UQR1 794 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 MRPS33Q9Y291 106 aaKnown RBP4.74□□□□□ -1.65
SDCBP-213ENST00000630925 STON1Q9Y6Q2 735 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 X6R8D5 127 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 COL24A1Q17RW2 1714 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 FRMPD4Q14CM0 1322 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 MAPK8IP3Q9UPT6 1336 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 MYO5BQ9ULV0 1848 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 CCDC141Q6ZP82 1450 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 FAM240BA0A1B0GVZ2 78 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 A0A1W2PPV4 95 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 MACROD2A1Z1Q3 448 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 PIPSLA2A3N6 862 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 BTBD19C9JJ37 291 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 H3BQ06 376 aaPredicted RBP4.73□□□□□ -1.65
SDCBP-213ENST00000630925 RNF13O43567 381 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 GPX5O75715 221 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 DDNO94850 711 aaPredicted RBP4.73□□□□□ -1.65
SDCBP-213ENST00000630925 SUN1O94901 812 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 NSA2O95478 260 aaKnown RBP4.73□□□□□ -1.65
SDCBP-213ENST00000630925 MBD3O95983 291 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 MBP02144 154 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 IL6P05231 212 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 MAPTP10636 758 aaKnown RBP4.73□□□□□ -1.65
SDCBP-213ENST00000630925 PSMA2P25787 234 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 PTPN7P35236 360 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 DLSTP36957 453 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 RANBP1P43487 201 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 CNN1P51911 297 aaKnown RBP4.73□□□□□ -1.65
SDCBP-213ENST00000630925 CDH6P55285 790 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 CTXN1P60606 82 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 ROM1Q03395 351 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 RESTQ13127 1097 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 DGCR6Q14129 220 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 RCAN2Q14206 197 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 ZSCAN23Q3MJ62 389 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 LCE2AQ5TA79 106 aaPredicted RBP4.73□□□□□ -1.65
SDCBP-213ENST00000630925 GRAMD4Q6IC98 578 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 RGS7BPQ6MZT1 257 aaPredicted RBP4.73□□□□□ -1.65
SDCBP-213ENST00000630925 LETMD1Q6P1Q0 360 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 CCDC137Q6PK04 289 aaKnown RBP4.73□□□□□ -1.65
SDCBP-213ENST00000630925 TSSK4Q6SA08 328 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 FAM180AQ6UWF9 173 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 KIAA1324Q6UXG2 1013 aaKnown RBP4.73□□□□□ -1.65
SDCBP-213ENST00000630925 ABHD15Q6UXT9 468 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 TMIGD1Q6UXZ0 262 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 GPRIN3Q6ZVF9 776 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 FRMD5Q7Z6J6 570 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 VRK2Q86Y07 508 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 ADGRF4Q8IZF3 695 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 LRRC75A-AS1Q8N1F1 130 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 SNX31Q8N9S9 440 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 FAM47BQ8NA70 645 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 C11orf65Q8NCR3 313 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 ZNF248Q8NDW4 579 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 CAPSLQ8WWF8 208 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 RAB40AQ8WXH6 277 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 ISL2Q96A47 359 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 SPSB1Q96BD6 273 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 ERLEC1Q96DZ1 483 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 BSCL2Q96G97 398 aaPredicted RBP4.73□□□□□ -1.65
SDCBP-213ENST00000630925 LRR1Q96L50 414 aa4.73□□□□□ -1.65
SDCBP-213ENST00000630925 SENP8Q96LD8 212 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms