RNA–Protein interactions for RNA: ENST00000622836.1

PCDHGC3-208, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-208ENST00000622836 MPC1LP0DKB6 136 aa13.5□□□□□ -0.25
PCDHGC3-208ENST00000622836 CBSLP0DN79 551 aa13.5□□□□□ -0.25
PCDHGC3-208ENST00000622836 CBSP35520 551 aa13.5□□□□□ -0.25
PCDHGC3-208ENST00000622836 SKIV2L2P42285 1042 aaKnown RBP13.5□□□□□ -0.25
PCDHGC3-208ENST00000622836 RGS4P49798 205 aa13.5□□□□□ -0.25
PCDHGC3-208ENST00000622836 VAC14Q08AM6 782 aa13.5□□□□□ -0.25
PCDHGC3-208ENST00000622836 SRSF6Q13247 344 aaKnown RBP13.5□□□□□ -0.25
PCDHGC3-208ENST00000622836 PDAP1Q13442 181 aaKnown RBP13.5□□□□□ -0.25
PCDHGC3-208ENST00000622836 FRG1Q14331 258 aaKnown RBP13.5□□□□□ -0.25
PCDHGC3-208ENST00000622836 SLC5A12Q1EHB4 618 aa13.5□□□□□ -0.25
PCDHGC3-208ENST00000622836 CCSMST1Q4G0I0 132 aa13.5□□□□□ -0.25
PCDHGC3-208ENST00000622836 RBM20Q5T481 1227 aaKnown RBP13.5□□□□□ -0.25
PCDHGC3-208ENST00000622836 C6orf15Q6UXA7 325 aaPredicted RBP13.5□□□□□ -0.25
PCDHGC3-208ENST00000622836 NEK10Q6ZWH5 1172 aa13.5□□□□□ -0.25
PCDHGC3-208ENST00000622836 GALNT7Q86SF2 657 aa13.5□□□□□ -0.25
PCDHGC3-208ENST00000622836 TMEM126BQ8IUX1 230 aa13.5□□□□□ -0.25
PCDHGC3-208ENST00000622836 ESX1Q8N693 406 aa13.5□□□□□ -0.25
PCDHGC3-208ENST00000622836 LMNTD1Q8N9Z9 388 aa13.5□□□□□ -0.25
PCDHGC3-208ENST00000622836 LINC01555Q8NAE3 123 aa13.5□□□□□ -0.25
PCDHGC3-208ENST00000622836 ZSCAN1Q8NBB4 408 aa13.5□□□□□ -0.25
PCDHGC3-208ENST00000622836 FBXO25Q8TCJ0 367 aa13.5□□□□□ -0.25
PCDHGC3-208ENST00000622836 CDKL2Q92772 493 aa13.5□□□□□ -0.25
PCDHGC3-208ENST00000622836 TCTN2Q96GX1 697 aa13.5□□□□□ -0.25
PCDHGC3-208ENST00000622836 SLC7A5P2Q9GIP4 190 aa13.5□□□□□ -0.25
PCDHGC3-208ENST00000622836 IRAK4Q9NWZ3 460 aa13.5□□□□□ -0.25
PCDHGC3-208ENST00000622836 MED16Q9Y2X0 877 aa13.5□□□□□ -0.25
PCDHGC3-208ENST00000622836 TMEM184BQ9Y519 407 aaPredicted RBP13.5□□□□□ -0.25
PCDHGC3-208ENST00000622836 CFAP47Q6ZTR5 3102 aa13.5□□□□□ -0.25
PCDHGC3-208ENST00000622836 LAMA5O15230 3695 aa13.49□□□□□ -0.25
PCDHGC3-208ENST00000622836 TEX51A0A1B0GUA7 166 aa13.49□□□□□ -0.25
PCDHGC3-208ENST00000622836 ESYT3A0FGR9 886 aa13.49□□□□□ -0.25
PCDHGC3-208ENST00000622836 KRT87PA6NCN2 255 aa13.49□□□□□ -0.25
PCDHGC3-208ENST00000622836 ARHGEF33A8MVX0 844 aa13.49□□□□□ -0.25
PCDHGC3-208ENST00000622836 PSIP1O75475 530 aaKnown RBP13.49□□□□□ -0.25
PCDHGC3-208ENST00000622836 SCRG1O75711 98 aa13.49□□□□□ -0.25
PCDHGC3-208ENST00000622836 MT-ND3P03897 115 aa13.49□□□□□ -0.25
PCDHGC3-208ENST00000622836 CCNYL3P0C7X3 344 aa13.49□□□□□ -0.25
PCDHGC3-208ENST00000622836 ZNF28P17035 718 aa13.49□□□□□ -0.25
PCDHGC3-208ENST00000622836 SAT1P21673 171 aa13.49□□□□□ -0.25
PCDHGC3-208ENST00000622836 GABRB3P28472 473 aa13.49□□□□□ -0.25
PCDHGC3-208ENST00000622836 PEBP1P30086 187 aaKnown RBP13.49□□□□□ -0.25
PCDHGC3-208ENST00000622836 GUCY2DQ02846 1103 aa13.49□□□□□ -0.25
PCDHGC3-208ENST00000622836 TSTA3Q13630 321 aaPredicted RBP13.49□□□□□ -0.25
PCDHGC3-208ENST00000622836 GRB7Q14451 532 aa13.49□□□□□ -0.25
PCDHGC3-208ENST00000622836 TRADDQ15628 312 aa13.49□□□□□ -0.25
PCDHGC3-208ENST00000622836 SF1Q15637 639 aaKnown RBP13.49□□□□□ -0.25
PCDHGC3-208ENST00000622836 LRRC8EQ6NSJ5 796 aa13.49□□□□□ -0.25
PCDHGC3-208ENST00000622836 FAM45BPQ6NSW5 357 aa13.49□□□□□ -0.25
PCDHGC3-208ENST00000622836 PWWP2BQ6NUJ5 590 aa13.49□□□□□ -0.25
PCDHGC3-208ENST00000622836 PIWIL4Q7Z3Z4 852 aaKnown RBP13.49□□□□□ -0.25
PCDHGC3-208ENST00000622836 STRA8Q7Z7C7 330 aa13.49□□□□□ -0.25
PCDHGC3-208ENST00000622836 MYO1HQ8N1T3 1032 aa13.49□□□□□ -0.25
PCDHGC3-208ENST00000622836 GALNT6Q8NCL4 622 aa13.49□□□□□ -0.25
PCDHGC3-208ENST00000622836 OR9A1PQ8NGU1 263 aa13.49□□□□□ -0.25
PCDHGC3-208ENST00000622836 OR8K5Q8NH50 307 aa13.49□□□□□ -0.25
PCDHGC3-208ENST00000622836 FAM45AQ8TCE6 357 aa13.49□□□□□ -0.25
PCDHGC3-208ENST00000622836 FCRL4Q96PJ5 515 aa13.49□□□□□ -0.25
PCDHGC3-208ENST00000622836 MENTQ9BUN1 341 aa13.49□□□□□ -0.25
PCDHGC3-208ENST00000622836 PRORYQ9H606 182 aa13.49□□□□□ -0.25
PCDHGC3-208ENST00000622836 GPN2Q9H9Y4 310 aaPredicted RBP13.49□□□□□ -0.25
PCDHGC3-208ENST00000622836 SYTL2Q9HCH5 934 aa13.49□□□□□ -0.25
PCDHGC3-208ENST00000622836 INTS7Q9NVH2 962 aaKnown RBP13.49□□□□□ -0.25
PCDHGC3-208ENST00000622836 NSMCE4AQ9NXX6 385 aa13.49□□□□□ -0.25
PCDHGC3-208ENST00000622836 SPATA7Q9P0W8 599 aa13.49□□□□□ -0.25
PCDHGC3-208ENST00000622836 TXNDC16Q9P2K2 825 aa13.49□□□□□ -0.25
PCDHGC3-208ENST00000622836 SERTAD3Q9UJW9 196 aa13.49□□□□□ -0.25
PCDHGC3-208ENST00000622836 CORO1CQ9ULV4 474 aaPredicted RBP13.49□□□□□ -0.25
PCDHGC3-208ENST00000622836 ZFYVE26Q68DK2 2539 aa13.49□□□□□ -0.25
PCDHGC3-208ENST00000622836 CHD6Q8TD26 2715 aa13.48□□□□□ -0.25
PCDHGC3-208ENST00000622836 FAM208BQ5VWN6 2430 aa13.48□□□□□ -0.25
PCDHGC3-208ENST00000622836 PABPN1LA6NDY0 278 aaKnown RBP13.48□□□□□ -0.25
PCDHGC3-208ENST00000622836 ZNF839A8K0R7 811 aa13.48□□□□□ -0.25
PCDHGC3-208ENST00000622836 K7ENP7 123 aa13.48□□□□□ -0.25
PCDHGC3-208ENST00000622836 EIF3FO00303 357 aaPredicted RBP13.48□□□□□ -0.25
PCDHGC3-208ENST00000622836 EFSO43281 561 aa13.48□□□□□ -0.25
PCDHGC3-208ENST00000622836 ZBTB14O43829 449 aa13.48□□□□□ -0.25
PCDHGC3-208ENST00000622836 TIAF1O95411 115 aa13.48□□□□□ -0.25
PCDHGC3-208ENST00000622836 DLGAP3O95886 979 aa13.48□□□□□ -0.25
PCDHGC3-208ENST00000622836 NTRK1P04629 796 aa13.48□□□□□ -0.25
PCDHGC3-208ENST00000622836 LIFP15018 202 aa13.48□□□□□ -0.25
PCDHGC3-208ENST00000622836 CYP2A7P20853 494 aa13.48□□□□□ -0.25
PCDHGC3-208ENST00000622836 OAS2P29728 719 aaKnown RBP13.48□□□□□ -0.25
PCDHGC3-208ENST00000622836 SSTR1P30872 391 aa13.48□□□□□ -0.25
PCDHGC3-208ENST00000622836 CDKN2DP55273 166 aa13.48□□□□□ -0.25
PCDHGC3-208ENST00000622836 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.48□□□□□ -0.25
PCDHGC3-208ENST00000622836 HECTD2Q5U5R9 776 aa13.48□□□□□ -0.25
PCDHGC3-208ENST00000622836 INO80CQ6PI98 192 aaPredicted RBP13.48□□□□□ -0.25
PCDHGC3-208ENST00000622836 PAQR3Q6TCH7 311 aa13.48□□□□□ -0.25
PCDHGC3-208ENST00000622836 CDHR3Q6ZTQ4 885 aa13.48□□□□□ -0.25
PCDHGC3-208ENST00000622836 C3orf62Q6ZUJ4 267 aa13.48□□□□□ -0.25
PCDHGC3-208ENST00000622836 UBE2R2Q712K3 238 aaPredicted RBP13.48□□□□□ -0.25
PCDHGC3-208ENST00000622836 TIPARPQ7Z3E1 657 aaKnown RBP13.48□□□□□ -0.25
PCDHGC3-208ENST00000622836 SLC26A11Q86WA9 606 aa13.48□□□□□ -0.25
PCDHGC3-208ENST00000622836 SPNS2Q8IVW8 549 aa13.48□□□□□ -0.25
PCDHGC3-208ENST00000622836 FAM20CQ8IXL6 584 aa13.48□□□□□ -0.25
PCDHGC3-208ENST00000622836 GPR135Q8IZ08 494 aa13.48□□□□□ -0.25
PCDHGC3-208ENST00000622836 MMGT1Q8N4V1 131 aa13.48□□□□□ -0.25
PCDHGC3-208ENST00000622836 ZNF501Q96CX3 271 aaPredicted RBP13.48□□□□□ -0.25
PCDHGC3-208ENST00000622836 LINGO1Q96FE5 620 aa13.48□□□□□ -0.25
PCDHGC3-208ENST00000622836 EFHD1Q9BUP0 239 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms