RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 PPFIBP2Q8ND30 876 aa17.3■□□□□ 0.36
PTCHD3-202ENST00000622555 ZNF483Q8TF39 744 aaPredicted RBP17.3■□□□□ 0.36
PTCHD3-202ENST00000622555 ZNF480Q8WV37 535 aa17.3■□□□□ 0.36
PTCHD3-202ENST00000622555 PYCR2Q96C36 320 aa17.3■□□□□ 0.36
PTCHD3-202ENST00000622555 MED8Q96G25 268 aa17.3■□□□□ 0.36
PTCHD3-202ENST00000622555 C20orf27Q9GZN8 174 aa17.3■□□□□ 0.36
PTCHD3-202ENST00000622555 ARRDC1-AS1Q9H2J1 176 aa17.3■□□□□ 0.36
PTCHD3-202ENST00000622555 OPTCQ9UBM4 332 aa17.3■□□□□ 0.36
PTCHD3-202ENST00000622555 LNPEPQ9UIQ6 1025 aa17.3■□□□□ 0.36
PTCHD3-202ENST00000622555 ANGPTL3Q9Y5C1 460 aa17.3■□□□□ 0.36
PTCHD3-202ENST00000622555 PCDH15Q96QU1 1955 aa17.29■□□□□ 0.36
PTCHD3-202ENST00000622555 E2F3O00716 465 aa17.29■□□□□ 0.36
PTCHD3-202ENST00000622555 WDR47O94967 919 aa17.29■□□□□ 0.36
PTCHD3-202ENST00000622555 VIPP01282 170 aa17.29■□□□□ 0.36
PTCHD3-202ENST00000622555 XRCC1P18887 633 aaPredicted RBP17.29■□□□□ 0.36
PTCHD3-202ENST00000622555 TSPAN8P19075 237 aa17.29■□□□□ 0.36
PTCHD3-202ENST00000622555 SERPINB5P36952 375 aa17.29■□□□□ 0.36
PTCHD3-202ENST00000622555 SLC6A12P48065 614 aa17.29■□□□□ 0.36
PTCHD3-202ENST00000622555 PNLIPRP1P54315 467 aa17.29■□□□□ 0.36
PTCHD3-202ENST00000622555 NAA20P61599 178 aa17.29■□□□□ 0.36
PTCHD3-202ENST00000622555 OCRLQ01968 901 aa17.29■□□□□ 0.36
PTCHD3-202ENST00000622555 BNIP3Q12983 259 aa17.29■□□□□ 0.36
PTCHD3-202ENST00000622555 NAE1Q13564 534 aa17.29■□□□□ 0.36
PTCHD3-202ENST00000622555 TSTA3Q13630 321 aaPredicted RBP17.29■□□□□ 0.36
PTCHD3-202ENST00000622555 SHBQ15464 509 aa17.29■□□□□ 0.36
PTCHD3-202ENST00000622555 CCDC6Q16204 474 aa17.29■□□□□ 0.36
PTCHD3-202ENST00000622555 ARL13AQ5H913 290 aaPredicted RBP17.29■□□□□ 0.36
PTCHD3-202ENST00000622555 PIGWQ7Z7B1 504 aa17.29■□□□□ 0.36
PTCHD3-202ENST00000622555 SFRP1Q8N474 314 aa17.29■□□□□ 0.36
PTCHD3-202ENST00000622555 TEX9Q8N6V9 391 aa17.29■□□□□ 0.36
PTCHD3-202ENST00000622555 OR52E1Q8NGJ3 308 aa17.29■□□□□ 0.36
PTCHD3-202ENST00000622555 SLC37A2Q8TED4 501 aa17.29■□□□□ 0.36
PTCHD3-202ENST00000622555 SEMA4BQ9NPR2 832 aaPredicted RBP17.29■□□□□ 0.36
PTCHD3-202ENST00000622555 FGFR1OP2Q9NVK5 253 aa17.29■□□□□ 0.36
PTCHD3-202ENST00000622555 SPATA7Q9P0W8 599 aa17.29■□□□□ 0.36
PTCHD3-202ENST00000622555 CPNE7Q9UBL6 633 aa17.29■□□□□ 0.36
PTCHD3-202ENST00000622555 RRP15Q9Y3B9 282 aaKnown RBP17.29■□□□□ 0.36
PTCHD3-202ENST00000622555 PCDHGA5Q9Y5G8 931 aa17.29■□□□□ 0.36
PTCHD3-202ENST00000622555 CUL9Q8IWT3 2517 aa17.28■□□□□ 0.36
PTCHD3-202ENST00000622555 USP34Q70CQ2 3546 aa17.28■□□□□ 0.36
PTCHD3-202ENST00000622555 K7EPI3 171 aa17.28■□□□□ 0.36
PTCHD3-202ENST00000622555 KDM1AO60341 852 aa17.28■□□□□ 0.36
PTCHD3-202ENST00000622555 CHRNGP07510 517 aa17.28■□□□□ 0.36
PTCHD3-202ENST00000622555 HSD17B2P37059 387 aa17.28■□□□□ 0.36
PTCHD3-202ENST00000622555 CLCQ05315 142 aa17.28■□□□□ 0.36
PTCHD3-202ENST00000622555 GTF2H2Q13888 395 aa17.28■□□□□ 0.36
PTCHD3-202ENST00000622555 GTF2H2CQ6P1K8 395 aa17.28■□□□□ 0.36
PTCHD3-202ENST00000622555 METTL2BQ6P1Q9 378 aaKnown RBP17.28■□□□□ 0.36
PTCHD3-202ENST00000622555 IL27RAQ6UWB1 636 aa17.28■□□□□ 0.36
PTCHD3-202ENST00000622555 LRRC70Q7Z2Q7 622 aa17.28■□□□□ 0.36
PTCHD3-202ENST00000622555 GOLGA7Q7Z5G4 137 aa17.28■□□□□ 0.36
PTCHD3-202ENST00000622555 YTHDF3Q7Z739 585 aaKnown RBP17.28■□□□□ 0.36
PTCHD3-202ENST00000622555 LMNTD1Q8N9Z9 388 aa17.28■□□□□ 0.36
PTCHD3-202ENST00000622555 MAPK15Q8TD08 544 aa17.28■□□□□ 0.36
PTCHD3-202ENST00000622555 TRPC4APQ8TEL6 797 aa17.28■□□□□ 0.36
PTCHD3-202ENST00000622555 NRTNQ99748 197 aa17.28■□□□□ 0.36
PTCHD3-202ENST00000622555 TRMOQ9BU70 441 aa17.28■□□□□ 0.36
PTCHD3-202ENST00000622555 PITPNM3Q9BZ71 974 aa17.28■□□□□ 0.36
PTCHD3-202ENST00000622555 SHCBP1LQ9BZQ2 653 aa17.28■□□□□ 0.36
PTCHD3-202ENST00000622555 SLC32A1Q9H598 525 aa17.28■□□□□ 0.36
PTCHD3-202ENST00000622555 GAREM1Q9H706 876 aa17.28■□□□□ 0.36
PTCHD3-202ENST00000622555 KIR3DX1Q9H7L2 352 aa17.28■□□□□ 0.36
PTCHD3-202ENST00000622555 ABCF3Q9NUQ8 709 aa17.28■□□□□ 0.36
PTCHD3-202ENST00000622555 POT1Q9NUX5 634 aa17.28■□□□□ 0.36
PTCHD3-202ENST00000622555 CSNK1G3Q9Y6M4 447 aa17.28■□□□□ 0.36
PTCHD3-202ENST00000622555 A0A1B0GTQ1 180 aa17.27■□□□□ 0.36
PTCHD3-202ENST00000622555 DFNA5O60443 496 aa17.27■□□□□ 0.36
PTCHD3-202ENST00000622555 EDF1O60869 148 aaKnown RBP17.27■□□□□ 0.36
PTCHD3-202ENST00000622555 SYPP08247 313 aa17.27■□□□□ 0.36
PTCHD3-202ENST00000622555 EPHA8P29322 1005 aaPredicted RBP17.27■□□□□ 0.36
PTCHD3-202ENST00000622555 UBE2IP63279 158 aaKnown RBP17.27■□□□□ 0.36
PTCHD3-202ENST00000622555 ARHGAP19Q14CB8 494 aa17.27■□□□□ 0.36
PTCHD3-202ENST00000622555 RBBP7Q16576 425 aa17.27■□□□□ 0.36
PTCHD3-202ENST00000622555 ATG14Q6ZNE5 492 aa17.27■□□□□ 0.36
PTCHD3-202ENST00000622555 SLC9B2Q86UD5 537 aa17.27■□□□□ 0.36
PTCHD3-202ENST00000622555 LSMEM2Q8N112 164 aa17.27■□□□□ 0.36
PTCHD3-202ENST00000622555 SLC25A45Q8N413 288 aa17.27■□□□□ 0.36
PTCHD3-202ENST00000622555 SNX31Q8N9S9 440 aa17.27■□□□□ 0.36
PTCHD3-202ENST00000622555 OR56A3Q8NH54 315 aa17.27■□□□□ 0.36
PTCHD3-202ENST00000622555 SEC16BQ96JE7 1060 aa17.27■□□□□ 0.36
PTCHD3-202ENST00000622555 C7orf26Q96N11 449 aa17.27■□□□□ 0.36
PTCHD3-202ENST00000622555 SORT1Q99523 831 aa17.27■□□□□ 0.36
PTCHD3-202ENST00000622555 MENTQ9BUN1 341 aa17.27■□□□□ 0.36
PTCHD3-202ENST00000622555 RAB11FIP5Q9BXF6 653 aa17.27■□□□□ 0.36
PTCHD3-202ENST00000622555 NUSAP1Q9BXS6 441 aaKnown RBP17.27■□□□□ 0.36
PTCHD3-202ENST00000622555 FAM107BQ9H098 131 aa17.27■□□□□ 0.36
PTCHD3-202ENST00000622555 SMOC1Q9H4F8 434 aa17.27■□□□□ 0.36
PTCHD3-202ENST00000622555 XKR8Q9H6D3 395 aa17.27■□□□□ 0.36
PTCHD3-202ENST00000622555 IL21RQ9HBE5 538 aa17.27■□□□□ 0.36
PTCHD3-202ENST00000622555 EML4Q9HC35 981 aaKnown RBP17.27■□□□□ 0.36
PTCHD3-202ENST00000622555 SLC40A1Q9NP59 571 aa17.27■□□□□ 0.36
PTCHD3-202ENST00000622555 GMEB2Q9UKD1 530 aa17.27■□□□□ 0.36
PTCHD3-202ENST00000622555 ZNF839A8K0R7 811 aa17.27■□□□□ 0.35
PTCHD3-202ENST00000622555 E7ENX8 843 aa17.27■□□□□ 0.35
PTCHD3-202ENST00000622555 ARHGAP33O14559 1287 aa17.27■□□□□ 0.35
PTCHD3-202ENST00000622555 ERGP11308 486 aa17.27■□□□□ 0.35
PTCHD3-202ENST00000622555 PKLRP30613 574 aa17.27■□□□□ 0.35
PTCHD3-202ENST00000622555 RAB28P51157 221 aa17.27■□□□□ 0.35
PTCHD3-202ENST00000622555 TBPL1P62380 186 aa17.27■□□□□ 0.35
PTCHD3-202ENST00000622555 TAP2Q03519 686 aa17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms