RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 TTKP33981 857 aa11.14□□□□□ -0.63
CLIP1-219ENST00000620786 SMCO1Q147U7 214 aa11.14□□□□□ -0.63
CLIP1-219ENST00000620786 PDSS1Q5T2R2 415 aa11.14□□□□□ -0.63
CLIP1-219ENST00000620786 FBXO46Q6PJ61 603 aaPredicted RBP11.14□□□□□ -0.63
CLIP1-219ENST00000620786 ZNF280BQ86YH2 543 aa11.14□□□□□ -0.63
CLIP1-219ENST00000620786 CHERPQ8IWX8 916 aaKnown RBP11.14□□□□□ -0.63
CLIP1-219ENST00000620786 FUKQ8N0W3 1084 aa11.14□□□□□ -0.63
CLIP1-219ENST00000620786 ZNF781Q8N8C0 355 aa11.14□□□□□ -0.63
CLIP1-219ENST00000620786 CHST4Q8NCG5 386 aa11.14□□□□□ -0.63
CLIP1-219ENST00000620786 TWNKQ96RR1 684 aa11.14□□□□□ -0.63
CLIP1-219ENST00000620786 GPATCH1Q9BRR8 931 aaKnown RBP11.14□□□□□ -0.63
CLIP1-219ENST00000620786 ALG2Q9H553 416 aa11.14□□□□□ -0.63
CLIP1-219ENST00000620786 PHF24Q9UPV7 400 aa11.14□□□□□ -0.63
CLIP1-219ENST00000620786 CYP11A1P05108 521 aa11.14□□□□□ -0.63
CLIP1-219ENST00000620786 MAGEA11P43364 429 aa11.14□□□□□ -0.63
CLIP1-219ENST00000620786 MC1RQ01726 317 aa11.14□□□□□ -0.63
CLIP1-219ENST00000620786 GPR65Q8IYL9 337 aa11.14□□□□□ -0.63
CLIP1-219ENST00000620786 CMTR2Q8IYT2 770 aaKnown RBP11.14□□□□□ -0.63
CLIP1-219ENST00000620786 MR1Q95460 341 aa11.14□□□□□ -0.63
CLIP1-219ENST00000620786 TMEM125Q96AQ2 219 aa11.14□□□□□ -0.63
CLIP1-219ENST00000620786 METTL7AQ9H8H3 244 aa11.14□□□□□ -0.63
CLIP1-219ENST00000620786 SIX2Q9NPC8 291 aa11.14□□□□□ -0.63
CLIP1-219ENST00000620786 FNIP2Q9P278 1114 aa11.14□□□□□ -0.63
CLIP1-219ENST00000620786 DKKL1Q9UK85 242 aa11.14□□□□□ -0.63
CLIP1-219ENST00000620786 PPM1HQ9ULR3 514 aa11.14□□□□□ -0.63
CLIP1-219ENST00000620786 B4GALT2O60909 372 aa11.14□□□□□ -0.63
CLIP1-219ENST00000620786 FOLH1Q04609 750 aa11.14□□□□□ -0.63
CLIP1-219ENST00000620786 DPYSQ14117 519 aa11.14□□□□□ -0.63
CLIP1-219ENST00000620786 ELOAQ14241 798 aaKnown RBP11.14□□□□□ -0.63
CLIP1-219ENST00000620786 SLC9B1Q4ZJI4 515 aa11.14□□□□□ -0.63
CLIP1-219ENST00000620786 FAM13CQ8NE31 585 aa11.14□□□□□ -0.63
CLIP1-219ENST00000620786 GSTCDQ8NEC7 633 aa11.14□□□□□ -0.63
CLIP1-219ENST00000620786 OR10A6Q8NH74 314 aa11.14□□□□□ -0.63
CLIP1-219ENST00000620786 C7orf26Q96N11 449 aa11.14□□□□□ -0.63
CLIP1-219ENST00000620786 FAM221BA6H8Z2 402 aa11.14□□□□□ -0.63
CLIP1-219ENST00000620786 MAN2B1O00754 1011 aa11.14□□□□□ -0.63
CLIP1-219ENST00000620786 SCDO00767 359 aa11.14□□□□□ -0.63
CLIP1-219ENST00000620786 COQ9O75208 318 aa11.14□□□□□ -0.63
CLIP1-219ENST00000620786 ENTPD5O75356 428 aa11.14□□□□□ -0.63
CLIP1-219ENST00000620786 SCELO95171 688 aa11.14□□□□□ -0.63
CLIP1-219ENST00000620786 CBSLP0DN79 551 aa11.14□□□□□ -0.63
CLIP1-219ENST00000620786 CBSP35520 551 aa11.14□□□□□ -0.63
CLIP1-219ENST00000620786 TAS2R39P59534 338 aa11.14□□□□□ -0.63
CLIP1-219ENST00000620786 SIM2Q14190 667 aaPredicted RBP11.14□□□□□ -0.63
CLIP1-219ENST00000620786 QPRTQ15274 297 aa11.14□□□□□ -0.63
CLIP1-219ENST00000620786 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.14□□□□□ -0.633e-6■■■■■ 26.9
CLIP1-219ENST00000620786 FAM174BQ3ZCQ3 159 aa11.14□□□□□ -0.63
CLIP1-219ENST00000620786 PAQR3Q6TCH7 311 aa11.14□□□□□ -0.63
CLIP1-219ENST00000620786 LRRC70Q7Z2Q7 622 aa11.14□□□□□ -0.63
CLIP1-219ENST00000620786 TMEM110Q86TL2 294 aa11.14□□□□□ -0.63
CLIP1-219ENST00000620786 THOC6Q86W42 341 aaKnown RBP11.14□□□□□ -0.63
CLIP1-219ENST00000620786 AMIGO1Q86WK6 493 aa11.14□□□□□ -0.63
CLIP1-219ENST00000620786 ARMC5Q96C12 935 aa11.14□□□□□ -0.63
CLIP1-219ENST00000620786 COX4I2Q96KJ9 171 aa11.14□□□□□ -0.63
CLIP1-219ENST00000620786 SGIP1Q9BQI5 828 aa11.14□□□□□ -0.63
CLIP1-219ENST00000620786 EFCAB11Q9BUY7 163 aa11.14□□□□□ -0.63
CLIP1-219ENST00000620786 BHLHE41Q9C0J9 482 aaPredicted RBP11.14□□□□□ -0.63
CLIP1-219ENST00000620786 B3GAT2Q9NPZ5 323 aa11.14□□□□□ -0.63
CLIP1-219ENST00000620786 DUXAA6NLW8 204 aa11.14□□□□□ -0.63
CLIP1-219ENST00000620786 TULP2O00295 520 aa11.14□□□□□ -0.63
CLIP1-219ENST00000620786 MAP2K7O14733 419 aa11.14□□□□□ -0.63
CLIP1-219ENST00000620786 KLK1P06870 262 aa11.14□□□□□ -0.63
CLIP1-219ENST00000620786 HNRNPA1P09651 372 aaKnown RBP eCLIP11.14□□□□□ -0.63
CLIP1-219ENST00000620786 ACVR2AP27037 513 aa11.14□□□□□ -0.63
CLIP1-219ENST00000620786 ARHGDIBP52566 201 aa11.14□□□□□ -0.63
CLIP1-219ENST00000620786 KCNJ2P63252 427 aa11.14□□□□□ -0.63
CLIP1-219ENST00000620786 ENPP2Q13822 863 aa11.14□□□□□ -0.63
CLIP1-219ENST00000620786 IFI44LQ53G44 452 aa11.14□□□□□ -0.63
CLIP1-219ENST00000620786 AKIRIN2Q53H80 203 aa11.14□□□□□ -0.63
CLIP1-219ENST00000620786 OLFML2AQ68BL7 652 aa11.14□□□□□ -0.63
CLIP1-219ENST00000620786 TPRG1Q6ZUI0 275 aa11.14□□□□□ -0.63
CLIP1-219ENST00000620786 THAP5Q7Z6K1 395 aa11.14□□□□□ -0.63
CLIP1-219ENST00000620786 SLC30A8Q8IWU4 369 aa11.14□□□□□ -0.63
CLIP1-219ENST00000620786 GHDCQ8N2G8 530 aa11.14□□□□□ -0.63
CLIP1-219ENST00000620786 DCAF4L2Q8NA75 395 aa11.14□□□□□ -0.63
CLIP1-219ENST00000620786 SMPDL3AQ92484 453 aa11.14□□□□□ -0.63
CLIP1-219ENST00000620786 NARS2Q96I59 477 aaKnown RBP11.14□□□□□ -0.63
CLIP1-219ENST00000620786 NSMCE3Q96MG7 304 aa11.14□□□□□ -0.63
CLIP1-219ENST00000620786 SMOQ99835 787 aa11.14□□□□□ -0.63
CLIP1-219ENST00000620786 TTYH3Q9C0H2 523 aa11.14□□□□□ -0.63
CLIP1-219ENST00000620786 SDHAF3Q9NRP4 125 aa11.14□□□□□ -0.63
CLIP1-219ENST00000620786 IFT80Q9P2H3 777 aaPredicted RBP11.14□□□□□ -0.63
CLIP1-219ENST00000620786 CFL2Q9Y281 166 aa11.14□□□□□ -0.63
CLIP1-219ENST00000620786 SHPRHQ149N8 1683 aa11.14□□□□□ -0.63
CLIP1-219ENST00000620786 WASHC1A8K0Z3 465 aa11.13□□□□□ -0.63
CLIP1-219ENST00000620786 WASH3PC4AMC7 463 aa11.13□□□□□ -0.63
CLIP1-219ENST00000620786 ADAMDEC1O15204 470 aa11.13□□□□□ -0.63
CLIP1-219ENST00000620786 COCHO43405 550 aa11.13□□□□□ -0.63
CLIP1-219ENST00000620786 CLEC3AO75596 197 aa11.13□□□□□ -0.63
CLIP1-219ENST00000620786 CFHP08603 1231 aa11.13□□□□□ -0.63
CLIP1-219ENST00000620786 PTDSS1P48651 473 aaKnown RBP11.13□□□□□ -0.63
CLIP1-219ENST00000620786 PUM1Q14671 1186 aaKnown RBP eCLIP11.13□□□□□ -0.635e-6■□□□□ 10.2
CLIP1-219ENST00000620786 GPR68Q15743 365 aa11.13□□□□□ -0.63
CLIP1-219ENST00000620786 NDUFA5Q16718 116 aa11.13□□□□□ -0.63
CLIP1-219ENST00000620786 WASH2PQ6VEQ5 465 aa11.13□□□□□ -0.63
CLIP1-219ENST00000620786 LRRC57Q8N9N7 239 aa11.13□□□□□ -0.63
CLIP1-219ENST00000620786 TFGQ92734 400 aaPredicted RBP11.13□□□□□ -0.63
CLIP1-219ENST00000620786 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.13□□□□□ -0.63
CLIP1-219ENST00000620786 VSTM5A8MXK1 200 aa11.13□□□□□ -0.63
CLIP1-219ENST00000620786 DNAJA2O60884 412 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms