RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 PTGIRP43119 386 aa16.53■□□□□ 0.24
HMGN3-203ENST00000620514 CSRP3P50461 194 aa16.53■□□□□ 0.24
HMGN3-203ENST00000620514 SARNPP82979 210 aaKnown RBP16.53■□□□□ 0.24
HMGN3-203ENST00000620514 CYP1B1Q16678 543 aa16.53■□□□□ 0.24
HMGN3-203ENST00000620514 MRNIPQ6NTE8 343 aa16.53■□□□□ 0.24
HMGN3-203ENST00000620514 CASC4Q6P4E1 433 aa16.53■□□□□ 0.24
HMGN3-203ENST00000620514 SDCCAG8Q86SQ7 713 aaPredicted RBP16.53■□□□□ 0.24
HMGN3-203ENST00000620514 ZNF655Q8N720 491 aaPredicted RBP16.53■□□□□ 0.24
HMGN3-203ENST00000620514 OR2L8Q8NGY9 312 aa16.53■□□□□ 0.24
HMGN3-203ENST00000620514 SKA2Q8WVK7 121 aaPredicted RBP16.53■□□□□ 0.24
HMGN3-203ENST00000620514 THAP4Q8WY91 577 aa16.53■□□□□ 0.24
HMGN3-203ENST00000620514 GALPQ9UBC7 116 aa16.53■□□□□ 0.24
HMGN3-203ENST00000620514 ANAPC2Q9UJX6 822 aa16.53■□□□□ 0.24
HMGN3-203ENST00000620514 SLC39A10Q9ULF5 831 aa16.53■□□□□ 0.24
HMGN3-203ENST00000620514 CRYL1Q9Y2S2 319 aa16.53■□□□□ 0.24
HMGN3-203ENST00000620514 SEC16AO15027 2179 aa16.53■□□□□ 0.24
HMGN3-203ENST00000620514 PGRMC1O00264 195 aaKnown RBP16.52■□□□□ 0.24
HMGN3-203ENST00000620514 RASGRF2O14827 1237 aa16.52■□□□□ 0.24
HMGN3-203ENST00000620514 C1orf105O95561 183 aa16.52■□□□□ 0.24
HMGN3-203ENST00000620514 HBQ1P09105 142 aa16.52■□□□□ 0.24
HMGN3-203ENST00000620514 CASRP41180 1078 aa16.52■□□□□ 0.24
HMGN3-203ENST00000620514 NCF4Q15080 339 aa16.52■□□□□ 0.24
HMGN3-203ENST00000620514 TCTN3Q6NUS6 607 aa16.52■□□□□ 0.24
HMGN3-203ENST00000620514 CNSTQ6PJW8 725 aa16.52■□□□□ 0.24
HMGN3-203ENST00000620514 CCDC137Q6PK04 289 aaKnown RBP16.52■□□□□ 0.24
HMGN3-203ENST00000620514 CENPUQ71F23 418 aa16.52■□□□□ 0.24
HMGN3-203ENST00000620514 SPNS2Q8IVW8 549 aa16.52■□□□□ 0.24
HMGN3-203ENST00000620514 GSDMBQ8TAX9 411 aa16.52■□□□□ 0.24
HMGN3-203ENST00000620514 ZNF669Q96BR6 464 aaPredicted RBP16.52■□□□□ 0.24
HMGN3-203ENST00000620514 GBP5Q96PP8 586 aa16.52■□□□□ 0.24
HMGN3-203ENST00000620514 OSBPL9Q96SU4 736 aa16.52■□□□□ 0.24
HMGN3-203ENST00000620514 GRPEL1Q9HAV7 217 aa16.52■□□□□ 0.24
HMGN3-203ENST00000620514 DHCR7Q9UBM7 475 aaKnown RBP16.52■□□□□ 0.24
HMGN3-203ENST00000620514 PLCL2Q9UPR0 1127 aa16.52■□□□□ 0.24
HMGN3-203ENST00000620514 AP1M2Q9Y6Q5 423 aa16.52■□□□□ 0.24
HMGN3-203ENST00000620514 FER1L5A0AVI2 2057 aa16.52■□□□□ 0.23
HMGN3-203ENST00000620514 MYO18BQ8IUG5 2567 aa16.51■□□□□ 0.23
HMGN3-203ENST00000620514 KPNA5O15131 536 aa16.51■□□□□ 0.23
HMGN3-203ENST00000620514 ZSCAN9O15535 394 aaPredicted RBP16.51■□□□□ 0.23
HMGN3-203ENST00000620514 PRICKLE3O43900 615 aaPredicted RBP16.51■□□□□ 0.23
HMGN3-203ENST00000620514 S1PR4O95977 384 aa16.51■□□□□ 0.23
HMGN3-203ENST00000620514 OGNP20774 298 aaKnown RBP16.51■□□□□ 0.23
HMGN3-203ENST00000620514 AGXTP21549 392 aa16.51■□□□□ 0.23
HMGN3-203ENST00000620514 CCL11P51671 97 aa16.51■□□□□ 0.23
HMGN3-203ENST00000620514 DHX34Q14147 1143 aaKnown RBP16.51■□□□□ 0.23
HMGN3-203ENST00000620514 ANKRD20A4Q4UJ75 823 aa16.51■□□□□ 0.23
HMGN3-203ENST00000620514 RNF187Q5TA31 235 aaPredicted RBP16.51■□□□□ 0.23
HMGN3-203ENST00000620514 FCRL6Q6DN72 434 aa16.51■□□□□ 0.23
HMGN3-203ENST00000620514 RHBDD2Q6NTF9 364 aa16.51■□□□□ 0.23
HMGN3-203ENST00000620514 NEPROQ6NW34 567 aa16.51■□□□□ 0.23
HMGN3-203ENST00000620514 ASB18Q6ZVZ8 466 aa16.51■□□□□ 0.23
HMGN3-203ENST00000620514 CILP2Q8IUL8 1156 aa16.51■□□□□ 0.23
HMGN3-203ENST00000620514 AGGF1Q8N302 714 aaeCLIP16.51■□□□□ 0.23
HMGN3-203ENST00000620514 ZBTB2Q8N680 514 aa16.51■□□□□ 0.23
HMGN3-203ENST00000620514 MCUQ8NE86 351 aa16.51■□□□□ 0.23
HMGN3-203ENST00000620514 DENND1AQ8TEH3 1009 aa16.51■□□□□ 0.23
HMGN3-203ENST00000620514 RAD51AP1Q96B01 352 aa16.51■□□□□ 0.23
HMGN3-203ENST00000620514 SERPINB12Q96P63 405 aa16.51■□□□□ 0.23
HMGN3-203ENST00000620514 TCF12Q99081 682 aa16.51■□□□□ 0.23
HMGN3-203ENST00000620514 ING2Q9H160 280 aa16.51■□□□□ 0.23
HMGN3-203ENST00000620514 KCNF1Q9H3M0 494 aa16.51■□□□□ 0.23
HMGN3-203ENST00000620514 IRAK4Q9NWZ3 460 aa16.51■□□□□ 0.23
HMGN3-203ENST00000620514 EURLQ9NYK6 297 aa16.51■□□□□ 0.23
HMGN3-203ENST00000620514 SAMD15Q9P1V8 674 aa16.51■□□□□ 0.23
HMGN3-203ENST00000620514 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.51■□□□□ 0.23
HMGN3-203ENST00000620514 PCSK5Q92824 1860 aa16.5■□□□□ 0.23
HMGN3-203ENST00000620514 MED13Q9UHV7 2174 aa16.5■□□□□ 0.23
HMGN3-203ENST00000620514 FAM237BA0A1B0GVD1 139 aa16.5■□□□□ 0.23
HMGN3-203ENST00000620514 SDR42E2A6NKP2 422 aa16.5■□□□□ 0.23
HMGN3-203ENST00000620514 C9J4A7 227 aa16.5■□□□□ 0.23
HMGN3-203ENST00000620514 ZNF185O15231 689 aa16.5■□□□□ 0.23
HMGN3-203ENST00000620514 ESR1P03372 595 aa16.5■□□□□ 0.23
HMGN3-203ENST00000620514 MLNP12872 115 aa16.5■□□□□ 0.23
HMGN3-203ENST00000620514 PAMP19021 973 aa16.5■□□□□ 0.23
HMGN3-203ENST00000620514 CHRM3P20309 590 aa16.5■□□□□ 0.23
HMGN3-203ENST00000620514 PSMB5P28074 263 aa16.5■□□□□ 0.23
HMGN3-203ENST00000620514 GRIA3P42263 894 aa16.5■□□□□ 0.23
HMGN3-203ENST00000620514 FOXL2P58012 376 aa16.5■□□□□ 0.23
HMGN3-203ENST00000620514 KLRB1Q12918 225 aa16.5■□□□□ 0.23
HMGN3-203ENST00000620514 GBX1Q14549 363 aa16.5■□□□□ 0.23
HMGN3-203ENST00000620514 SLC9A5Q14940 896 aa16.5■□□□□ 0.23
HMGN3-203ENST00000620514 SF1Q15637 639 aaKnown RBP16.5■□□□□ 0.23
HMGN3-203ENST00000620514 ACSBG2Q5FVE4 666 aa16.5■□□□□ 0.23
HMGN3-203ENST00000620514 MLIPQ5VWP3 458 aa16.5■□□□□ 0.23
HMGN3-203ENST00000620514 TLDC1Q6P9B6 456 aa16.5■□□□□ 0.23
HMGN3-203ENST00000620514 TTC23LQ6PF05 361 aa16.5■□□□□ 0.23
HMGN3-203ENST00000620514 FIGLAQ6QHK4 219 aa16.5■□□□□ 0.23
HMGN3-203ENST00000620514 MCATQ8IVS2 390 aaKnown RBP16.5■□□□□ 0.23
HMGN3-203ENST00000620514 TMEM151BQ8IW70 566 aa16.5■□□□□ 0.23
HMGN3-203ENST00000620514 SLC22A18Q96BI1 424 aa16.5■□□□□ 0.23
HMGN3-203ENST00000620514 NAP1L3Q99457 506 aaPredicted RBP16.5■□□□□ 0.23
HMGN3-203ENST00000620514 DPH2Q9BQC3 489 aaPredicted RBP16.5■□□□□ 0.23
HMGN3-203ENST00000620514 ACSS2Q9NR19 701 aa16.5■□□□□ 0.23
HMGN3-203ENST00000620514 TRMT1Q9NXH9 659 aaKnown RBP16.5■□□□□ 0.23
HMGN3-203ENST00000620514 TNRC6AQ8NDV7 1962 aaKnown RBP16.49■□□□□ 0.23
HMGN3-203ENST00000620514 ZCWPW2A0A1B0GU75 182 aa16.49■□□□□ 0.23
HMGN3-203ENST00000620514 H3BMM5 538 aa16.49■□□□□ 0.23
HMGN3-203ENST00000620514 PHF2O75151 1096 aa16.49■□□□□ 0.23
HMGN3-203ENST00000620514 CNOT3O75175 753 aaKnown RBP16.49■□□□□ 0.23
HMGN3-203ENST00000620514 KLF7O75840 302 aaPredicted RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms