RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 DNASE1L3Q13609 305 aa6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 PARP15Q460N3 678 aa6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 PTCRAQ6ISU1 281 aaPredicted RBP6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 TXNDC11Q6PKC3 985 aa6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 PAGE2Q7Z2X7 111 aa6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 AKAP14Q86UN6 197 aa6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 BPHLQ86WA6 291 aaPredicted RBP6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 P3H2Q8IVL5 708 aa6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 POC5Q8NA72 575 aa6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 HMGCLL1Q8TB92 370 aa6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 CAPSLQ8WWF8 208 aa6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 ZHX1-C8orf76Q96EF9 292 aa6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 FAM120BQ96EK7 910 aaKnown RBP6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 MRGPRX2Q96LB1 330 aa6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 NSUN5Q96P11 429 aaKnown RBP6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 DOK1Q99704 481 aa6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 APOL4Q9BPW4 351 aa6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 TFB2MQ9H5Q4 396 aaKnown RBP6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 SLC28A3Q9HAS3 691 aa6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 PARVBQ9HBI1 364 aa6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 TREX1Q9NSU2 369 aa6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 FAM8A1Q9UBU6 413 aa6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 INVSQ9Y283 1065 aa6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 DRGXA6NNA5 263 aa6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 METTL12A8MUP2 240 aa6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 BCKDKO14874 412 aa6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 BCAS1O75363 584 aaPredicted RBP6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 DNAJB5O75953 348 aa6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 C1RP00736 705 aa6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 LINC00271P0C7V0 271 aa6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 SLC2A4P14672 509 aa6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 PBX2P40425 430 aa6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 CDKN2DP55273 166 aa6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 NTHL1P78549 312 aa6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 UBE3AQ05086 875 aa6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 TRAF3Q13114 568 aa6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 ARSJQ5FYB0 599 aaPredicted RBP6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 CACHD1Q5VU97 1274 aa6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 GRASPQ7Z6J2 395 aaPredicted RBP6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 TMEM150AQ86TG1 271 aa6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 GPSM1Q86YR5 675 aa6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 NKAPQ8N5F7 415 aaKnown RBP6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 MCOLN3Q8TDD5 553 aa6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 HTRA1Q92743 480 aa6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 NKD1Q969G9 470 aa6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 SH3YL1Q96HL8 342 aaPredicted RBP6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 FAM129BQ96TA1 746 aa6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 SPSB2Q99619 263 aa6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 IL12RB2Q99665 862 aa6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 EGFL8Q99944 293 aa6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 DPY30Q9C005 99 aa6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 C6orf62Q9GZU0 229 aaPredicted RBP6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 MSRAQ9UJ68 235 aa6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 FAM32AQ9Y421 112 aaKnown RBP6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 IRAK3Q9Y616 596 aa6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 A0A1B0GVM2 712 aa6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 TTC24A2A3L6 582 aaPredicted RBP6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 LRRC14BA6NHZ5 514 aa6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 TRIM64CA6NLI5 447 aa6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 WASH4PA8MWX3 477 aa6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 UBFD1O14562 309 aaKnown RBP6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 EEDO75530 441 aaKnown RBP6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 SEC14L2O76054 403 aa6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 RECQL5O94762 991 aaPredicted RBP6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 MYO1DO94832 1006 aa6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 PAPSS2O95340 614 aaPredicted RBP6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 CPNE6O95741 557 aa6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 UGT2B4P06133 528 aa6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 FGF4P08620 206 aa6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 GSTT2P0CG29 244 aa6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 GSTT2BP0CG30 244 aa6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 JUNDP17535 347 aa6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 ARNTP27540 789 aa6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 HPCAL1P37235 193 aa6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 DSC2Q02487 901 aa6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 TEAD2Q15562 447 aa6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 CRY1Q16526 586 aa6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 MAPKAPK3Q16644 382 aa6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 RNF219Q5W0B1 726 aaPredicted RBP6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 SLC2A7Q6PXP3 512 aa6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 TMC5Q6UXY8 1006 aa6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 RANBP10Q6VN20 620 aa6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 TAS2R42Q7RTR8 314 aa6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 HORMAD1Q86X24 394 aa6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 SPARTQ8N0X7 666 aa6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 C12orf76Q8N812 135 aaPredicted RBP6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 ZNF540Q8NDQ6 660 aa6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 OR4L1Q8NH43 312 aa6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 MCFD2Q8NI22 146 aa6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 ING5Q8WYH8 240 aa6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 TCEAL4Q96EI5 215 aa6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 SMURF2Q9HAU4 748 aa6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 AIG1Q9NVV5 245 aa6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 DPP7Q9UHL4 492 aa6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 NEU3Q9UQ49 428 aa6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 U3KQV3 271 aa6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 NLRC5Q86WI3 1866 aa6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 IGLV3-10A0A075B6K4 115 aa6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 SOBPA7XYQ1 873 aa6.83□□□□□ -1.32
SRGAP3-213ENST00000618999 SNPHO15079 494 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms