RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 GKN2Q86XP6 184 aa10.96□□□□□ -0.66
CCDC144B-208ENST00000618081 PRSS58Q8IYP2 241 aa10.96□□□□□ -0.66
CCDC144B-208ENST00000618081 OR4C15Q8NGM1 316 aa10.96□□□□□ -0.66
CCDC144B-208ENST00000618081 KLRG1Q96E93 195 aa10.96□□□□□ -0.66
CCDC144B-208ENST00000618081 CENPNQ96H22 339 aaPredicted RBP10.96□□□□□ -0.66
CCDC144B-208ENST00000618081 NIFKQ9BYG3 293 aaKnown RBP10.96□□□□□ -0.66
CCDC144B-208ENST00000618081 SP140LQ9H930 580 aa10.96□□□□□ -0.66
CCDC144B-208ENST00000618081 C1orf109Q9NX04 203 aa10.96□□□□□ -0.66
CCDC144B-208ENST00000618081 PCDHB3Q9Y5E6 796 aa10.96□□□□□ -0.66
CCDC144B-208ENST00000618081 COL14A1Q05707 1796 aaKnown RBP10.96□□□□□ -0.66
CCDC144B-208ENST00000618081 PRAMEF33A0A0G2JMD5 474 aa10.95□□□□□ -0.66
CCDC144B-208ENST00000618081 PRAMEF10O60809 474 aa10.95□□□□□ -0.66
CCDC144B-208ENST00000618081 NFKB2Q00653 900 aa10.95□□□□□ -0.66
CCDC144B-208ENST00000618081 TUBB3Q13509 450 aa10.95□□□□□ -0.66
CCDC144B-208ENST00000618081 RUNDC3AQ59EK9 446 aa10.95□□□□□ -0.66
CCDC144B-208ENST00000618081 BRAT1Q6PJG6 821 aa10.95□□□□□ -0.66
CCDC144B-208ENST00000618081 ZNF627Q7L945 461 aa10.95□□□□□ -0.66
CCDC144B-208ENST00000618081 KCTD13Q8WZ19 329 aa10.95□□□□□ -0.66
CCDC144B-208ENST00000618081 SLCO1B3Q9NPD5 702 aa10.95□□□□□ -0.66
CCDC144B-208ENST00000618081 CIDEBQ9UHD4 219 aa10.95□□□□□ -0.66
CCDC144B-208ENST00000618081 FBXW11Q9UKB1 542 aa10.95□□□□□ -0.66
CCDC144B-208ENST00000618081 ITGA10O75578 1167 aa10.95□□□□□ -0.66
CCDC144B-208ENST00000618081 LIMK2P53671 638 aa10.95□□□□□ -0.66
CCDC144B-208ENST00000618081 RNF19BQ6ZMZ0 732 aa10.95□□□□□ -0.66
CCDC144B-208ENST00000618081 OR10A6Q8NH74 314 aa10.95□□□□□ -0.66
CCDC144B-208ENST00000618081 IL31RAQ8NI17 732 aa10.95□□□□□ -0.66
CCDC144B-208ENST00000618081 TBATAQ96M53 351 aa10.95□□□□□ -0.66
CCDC144B-208ENST00000618081 PEX16Q9Y5Y5 336 aa10.95□□□□□ -0.66
CCDC144B-208ENST00000618081 TRIM64BA6NI03 449 aa10.95□□□□□ -0.66
CCDC144B-208ENST00000618081 ITGB5P18084 799 aa10.95□□□□□ -0.66
CCDC144B-208ENST00000618081 ATF6P18850 670 aa10.95□□□□□ -0.66
CCDC144B-208ENST00000618081 CDKN2BP42772 138 aa10.95□□□□□ -0.66
CCDC144B-208ENST00000618081 DHPSP49366 369 aaPredicted RBP10.95□□□□□ -0.66
CCDC144B-208ENST00000618081 ZNF41P51814 821 aaPredicted RBP10.95□□□□□ -0.66
CCDC144B-208ENST00000618081 CAPZA1P52907 286 aa10.95□□□□□ -0.66
CCDC144B-208ENST00000618081 CD47Q08722 323 aa10.95□□□□□ -0.66
CCDC144B-208ENST00000618081 PRAMEF17Q5VTA0 474 aa10.95□□□□□ -0.66
CCDC144B-208ENST00000618081 ANO7Q6IWH7 933 aa10.95□□□□□ -0.66
CCDC144B-208ENST00000618081 ENPP7Q6UWV6 458 aa10.95□□□□□ -0.66
CCDC144B-208ENST00000618081 CYP2U1Q7Z449 544 aa10.95□□□□□ -0.66
CCDC144B-208ENST00000618081 SIDT2Q8NBJ9 832 aaKnown RBP10.95□□□□□ -0.66
CCDC144B-208ENST00000618081 NDRG1Q92597 394 aaKnown RBP10.95□□□□□ -0.66
CCDC144B-208ENST00000618081 NODALQ96S42 347 aa10.95□□□□□ -0.66
CCDC144B-208ENST00000618081 STOX2Q9P2F5 926 aaPredicted RBP10.95□□□□□ -0.66
CCDC144B-208ENST00000618081 BTBD19C9JJ37 291 aa10.95□□□□□ -0.66
CCDC144B-208ENST00000618081 NPHS1O60500 1241 aa10.95□□□□□ -0.66
CCDC144B-208ENST00000618081 PER3P56645 1201 aa10.95□□□□□ -0.66
CCDC144B-208ENST00000618081 ARFRP1Q13795 201 aa10.95□□□□□ -0.66
CCDC144B-208ENST00000618081 EIF2S3LQ2VIR3 472 aaKnown RBP10.95□□□□□ -0.66
CCDC144B-208ENST00000618081 IDNKQ5T6J7 187 aa10.95□□□□□ -0.66
CCDC144B-208ENST00000618081 IRF2BP2Q7Z5L9 587 aa10.95□□□□□ -0.66
CCDC144B-208ENST00000618081 ZDHHC21Q8IVQ6 265 aa10.95□□□□□ -0.66
CCDC144B-208ENST00000618081 ACDQ96AP0 544 aa10.95□□□□□ -0.66
CCDC144B-208ENST00000618081 BORCS8Q96FH0 119 aa10.95□□□□□ -0.66
CCDC144B-208ENST00000618081 GFM1Q96RP9 751 aaKnown RBP10.95□□□□□ -0.66
CCDC144B-208ENST00000618081 MTERF1Q99551 399 aaKnown RBP10.95□□□□□ -0.66
CCDC144B-208ENST00000618081 SLC17A7Q9P2U7 560 aa10.95□□□□□ -0.66
CCDC144B-208ENST00000618081 TESMINQ9Y4I5 508 aa10.95□□□□□ -0.66
CCDC144B-208ENST00000618081 EDDM13A0A1B0GTR0 161 aa10.95□□□□□ -0.66
CCDC144B-208ENST00000618081 FSCN2O14926 492 aa10.95□□□□□ -0.66
CCDC144B-208ENST00000618081 DRD4P21917 467 aa10.95□□□□□ -0.66
CCDC144B-208ENST00000618081 PRKCHP24723 683 aa10.95□□□□□ -0.66
CCDC144B-208ENST00000618081 MSX2P35548 267 aaPredicted RBP10.95□□□□□ -0.66
CCDC144B-208ENST00000618081 GDPD4Q6W3E5 623 aa10.95□□□□□ -0.66
CCDC144B-208ENST00000618081 LDB1Q86U70 411 aaPredicted RBP10.95□□□□□ -0.66
CCDC144B-208ENST00000618081 SLITRK4Q8IW52 837 aa10.95□□□□□ -0.66
CCDC144B-208ENST00000618081 MINDY2Q8NBR6 621 aa10.95□□□□□ -0.66
CCDC144B-208ENST00000618081 GSTCDQ8NEC7 633 aa10.95□□□□□ -0.66
CCDC144B-208ENST00000618081 TMCO6Q96DC7 493 aa10.95□□□□□ -0.66
CCDC144B-208ENST00000618081 SLC6A15Q9H2J7 730 aa10.95□□□□□ -0.66
CCDC144B-208ENST00000618081 XRN1Q8IZH2 1706 aaKnown RBP10.95□□□□□ -0.66
CCDC144B-208ENST00000618081 B4DGG1 531 aa10.95□□□□□ -0.66
CCDC144B-208ENST00000618081 CRHR2Q13324 411 aa10.95□□□□□ -0.66
CCDC144B-208ENST00000618081 C2orf27AQ580R0 203 aa10.95□□□□□ -0.66
CCDC144B-208ENST00000618081 C6orf52Q5T4I8 152 aa10.95□□□□□ -0.66
CCDC144B-208ENST00000618081 CEP97Q8IW35 865 aa10.95□□□□□ -0.66
CCDC144B-208ENST00000618081 TMEM156Q8N614 296 aa10.95□□□□□ -0.66
CCDC144B-208ENST00000618081 DQX1Q8TE96 717 aaKnown RBP10.95□□□□□ -0.66
CCDC144B-208ENST00000618081 FUBP3Q96I24 572 aaKnown RBP eCLIP10.95□□□□□ -0.66
CCDC144B-208ENST00000618081 PIWIL1Q96J94 861 aaKnown RBP10.95□□□□□ -0.66
CCDC144B-208ENST00000618081 STRADBQ9C0K7 418 aa10.95□□□□□ -0.66
CCDC144B-208ENST00000618081 WASF3Q9UPY6 502 aa10.95□□□□□ -0.66
CCDC144B-208ENST00000618081 TIE1P35590 1138 aa10.95□□□□□ -0.66
CCDC144B-208ENST00000618081 GPM6BQ13491 265 aa10.95□□□□□ -0.66
CCDC144B-208ENST00000618081 PDGFRLQ15198 375 aa10.95□□□□□ -0.66
CCDC144B-208ENST00000618081 FSTL4Q6MZW2 842 aa10.95□□□□□ -0.66
CCDC144B-208ENST00000618081 NIPAL1Q6NVV3 410 aa10.95□□□□□ -0.66
CCDC144B-208ENST00000618081 SH3RF1Q7Z6J0 888 aa10.95□□□□□ -0.66
CCDC144B-208ENST00000618081 P2RY8Q86VZ1 359 aa10.95□□□□□ -0.66
CCDC144B-208ENST00000618081 NUDT13Q86X67 352 aa10.95□□□□□ -0.66
CCDC144B-208ENST00000618081 CIR1Q86X95 450 aaPredicted RBP10.95□□□□□ -0.66
CCDC144B-208ENST00000618081 KLHL36Q8N4N3 616 aa10.95□□□□□ -0.66
CCDC144B-208ENST00000618081 CA12O43570 354 aa10.94□□□□□ -0.66
CCDC144B-208ENST00000618081 C4BPAP04003 597 aaKnown RBP10.94□□□□□ -0.66
CCDC144B-208ENST00000618081 RPLP0P05388 317 aaKnown RBP10.94□□□□□ -0.66
CCDC144B-208ENST00000618081 OR4Q2P0C623 313 aa10.94□□□□□ -0.66
CCDC144B-208ENST00000618081 XKP51811 444 aa10.94□□□□□ -0.66
CCDC144B-208ENST00000618081 MST1RQ04912 1400 aa10.94□□□□□ -0.66
CCDC144B-208ENST00000618081 PRPF38BQ5VTL8 546 aaKnown RBP10.94□□□□□ -0.66
CCDC144B-208ENST00000618081 NANOGNBQ7Z5D8 188 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms