RNA–Protein interactions for RNA: ENST00000617339.4

SHROOM1-208, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 3,638 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-208ENST00000617339 ARIH1Q9Y4X5 557 aaPredicted RBP14.15□□□□□ -0.14
SHROOM1-208ENST00000617339 NLRC5Q86WI3 1866 aa14.15□□□□□ -0.14
SHROOM1-208ENST00000617339 TTC34A8MYJ7 566 aa14.15□□□□□ -0.14
SHROOM1-208ENST00000617339 PARNO95453 639 aaKnown RBP14.15□□□□□ -0.14
SHROOM1-208ENST00000617339 S100A1P23297 94 aa14.15□□□□□ -0.14
SHROOM1-208ENST00000617339 INAVAQ3KP66 663 aa14.15□□□□□ -0.14
SHROOM1-208ENST00000617339 UGT3A2Q3SY77 523 aa14.15□□□□□ -0.14
SHROOM1-208ENST00000617339 RFTN2Q52LD8 501 aaPredicted RBP14.15□□□□□ -0.14
SHROOM1-208ENST00000617339 ARSIQ5FYB1 569 aa14.15□□□□□ -0.14
SHROOM1-208ENST00000617339 PSD4Q8NDX1 1056 aa14.15□□□□□ -0.14
SHROOM1-208ENST00000617339 VWCEQ96DN2 955 aa14.15□□□□□ -0.14
SHROOM1-208ENST00000617339 AURKBQ96GD4 344 aaPredicted RBP14.15□□□□□ -0.14
SHROOM1-208ENST00000617339 FAR2Q96K12 515 aa14.15□□□□□ -0.14
SHROOM1-208ENST00000617339 FNIP2Q9P278 1114 aa14.15□□□□□ -0.14
SHROOM1-208ENST00000617339 CCDC154A6NI56 674 aa14.14□□□□□ -0.15
SHROOM1-208ENST00000617339 PCDH8O95206 1070 aa14.14□□□□□ -0.15
SHROOM1-208ENST00000617339 HMGCLP35914 325 aa14.14□□□□□ -0.15
SHROOM1-208ENST00000617339 NRIP1P48552 1158 aa14.14□□□□□ -0.15
SHROOM1-208ENST00000617339 CACNG1Q06432 222 aa14.14□□□□□ -0.15
SHROOM1-208ENST00000617339 TRAP1Q12931 704 aaKnown RBP14.14□□□□□ -0.15
SHROOM1-208ENST00000617339 TBPL2Q6SJ96 375 aa14.14□□□□□ -0.15
SHROOM1-208ENST00000617339 HEATR4Q86WZ0 1026 aa14.14□□□□□ -0.15
SHROOM1-208ENST00000617339 MED8Q96G25 268 aa14.14□□□□□ -0.15
SHROOM1-208ENST00000617339 SH3YL1Q96HL8 342 aaPredicted RBP14.14□□□□□ -0.15
SHROOM1-208ENST00000617339 TSSK3Q96PN8 268 aa14.14□□□□□ -0.15
SHROOM1-208ENST00000617339 CD300AQ9UGN4 299 aa14.14□□□□□ -0.15
SHROOM1-208ENST00000617339 VPS4AQ9UN37 437 aa14.14□□□□□ -0.15
SHROOM1-208ENST00000617339 SRCP12931 536 aa14.14□□□□□ -0.15
SHROOM1-208ENST00000617339 TYRP14679 529 aa14.14□□□□□ -0.15
SHROOM1-208ENST00000617339 CSRP3P50461 194 aa14.14□□□□□ -0.15
SHROOM1-208ENST00000617339 IFITM3Q01628 133 aa14.14□□□□□ -0.15
SHROOM1-208ENST00000617339 SLC13A2Q13183 592 aa14.14□□□□□ -0.15
SHROOM1-208ENST00000617339 AQP6Q13520 282 aa14.14□□□□□ -0.15
SHROOM1-208ENST00000617339 ACOX1Q15067 660 aa14.14□□□□□ -0.15
SHROOM1-208ENST00000617339 CRY1Q16526 586 aa14.14□□□□□ -0.15
SHROOM1-208ENST00000617339 TMEM236Q5W0B7 351 aa14.14□□□□□ -0.15
SHROOM1-208ENST00000617339 SLC22A16Q86VW1 577 aa14.14□□□□□ -0.15
SHROOM1-208ENST00000617339 CLEC4FQ8N1N0 589 aa14.14□□□□□ -0.15
SHROOM1-208ENST00000617339 ZCCHC7Q8N3Z6 543 aaKnown RBP14.14□□□□□ -0.15
SHROOM1-208ENST00000617339 KRTCAP2Q8N6L1 136 aa14.14□□□□□ -0.15
SHROOM1-208ENST00000617339 RNF145Q96MT1 663 aa14.14□□□□□ -0.15
SHROOM1-208ENST00000617339 DERL2Q9GZP9 239 aa14.14□□□□□ -0.15
SHROOM1-208ENST00000617339 CCM2LQ9NUG4 571 aaPredicted RBP14.14□□□□□ -0.15
SHROOM1-208ENST00000617339 INTS10Q9NVR2 710 aaKnown RBP14.14□□□□□ -0.15
SHROOM1-208ENST00000617339 MAP10Q9P2G4 905 aa14.14□□□□□ -0.15
SHROOM1-208ENST00000617339 B4GALT6Q9UBX8 382 aa14.14□□□□□ -0.15
SHROOM1-208ENST00000617339 OGDHLQ9ULD0 1010 aa14.14□□□□□ -0.15
SHROOM1-208ENST00000617339 ZFC3H1O60293 1989 aaKnown RBP14.14□□□□□ -0.15
SHROOM1-208ENST00000617339 LOC730098B7Z3J9 87 aa14.14□□□□□ -0.15
SHROOM1-208ENST00000617339 TRBC1P01850 177 aa14.14□□□□□ -0.15
SHROOM1-208ENST00000617339 SHMT2P34897 504 aa14.14□□□□□ -0.15
SHROOM1-208ENST00000617339 ETV3P41162 512 aa14.14□□□□□ -0.15
SHROOM1-208ENST00000617339 POLD2P49005 469 aa14.14□□□□□ -0.15
SHROOM1-208ENST00000617339 PLA2G16P53816 162 aa14.14□□□□□ -0.15
SHROOM1-208ENST00000617339 MESP2Q0VG99 397 aa14.14□□□□□ -0.15
SHROOM1-208ENST00000617339 GPM6BQ13491 265 aa14.14□□□□□ -0.15
SHROOM1-208ENST00000617339 GTF2H2Q13888 395 aa14.14□□□□□ -0.15
SHROOM1-208ENST00000617339 OXA1LQ15070 435 aa14.14□□□□□ -0.15
SHROOM1-208ENST00000617339 INAQ16352 499 aa14.14□□□□□ -0.15
SHROOM1-208ENST00000617339 BCL2A1Q16548 175 aa14.14□□□□□ -0.15
SHROOM1-208ENST00000617339 CYBRD1Q53TN4 286 aa14.14□□□□□ -0.15
SHROOM1-208ENST00000617339 GTF2H2CQ6P1K8 395 aa14.14□□□□□ -0.15
SHROOM1-208ENST00000617339 CRTC1Q6UUV9 634 aa14.14□□□□□ -0.15
SHROOM1-208ENST00000617339 OR2AP1Q8NGE2 309 aa14.14□□□□□ -0.15
SHROOM1-208ENST00000617339 OR13F1Q8NGS4 319 aa14.14□□□□□ -0.15
SHROOM1-208ENST00000617339 CENPNQ96H22 339 aaPredicted RBP14.14□□□□□ -0.15
SHROOM1-208ENST00000617339 SEZ6LQ9BYH1 1024 aa14.14□□□□□ -0.15
SHROOM1-208ENST00000617339 BRD9Q9H8M2 597 aa14.14□□□□□ -0.15
SHROOM1-208ENST00000617339 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.14□□□□□ -0.15
SHROOM1-208ENST00000617339 PCTPQ9UKL6 214 aa14.14□□□□□ -0.15
SHROOM1-208ENST00000617339 ADSLP30566 484 aaPredicted RBP14.13□□□□□ -0.15
SHROOM1-208ENST00000617339 PTGER3P43115 390 aa14.13□□□□□ -0.15
SHROOM1-208ENST00000617339 RGS4P49798 205 aa14.13□□□□□ -0.15
SHROOM1-208ENST00000617339 SEPHS1P49903 392 aa14.13□□□□□ -0.15
SHROOM1-208ENST00000617339 METAP1P53582 386 aa14.13□□□□□ -0.15
SHROOM1-208ENST00000617339 ZNF846Q147U1 533 aa14.13□□□□□ -0.15
SHROOM1-208ENST00000617339 GOLGA7Q7Z5G4 137 aa14.13□□□□□ -0.15
SHROOM1-208ENST00000617339 TERB1Q8NA31 727 aa14.13□□□□□ -0.15
SHROOM1-208ENST00000617339 DHRS1Q96LJ7 313 aa14.13□□□□□ -0.15
SHROOM1-208ENST00000617339 DOK1Q99704 481 aa14.13□□□□□ -0.15
SHROOM1-208ENST00000617339 CEP44Q9C0F1 390 aa14.13□□□□□ -0.15
SHROOM1-208ENST00000617339 ITM2CQ9NQX7 267 aa14.13□□□□□ -0.15
SHROOM1-208ENST00000617339 ABCB10Q9NRK6 738 aa14.13□□□□□ -0.15
SHROOM1-208ENST00000617339 TMEM181Q9P2C4 612 aa14.13□□□□□ -0.15
SHROOM1-208ENST00000617339 TBX21Q9UL17 535 aa14.13□□□□□ -0.15
SHROOM1-208ENST00000617339 PIKFYVEQ9Y2I7 2098 aa14.13□□□□□ -0.15
SHROOM1-208ENST00000617339 SLC22A2O15244 555 aa14.13□□□□□ -0.15
SHROOM1-208ENST00000617339 TSPAN12O95859 305 aa14.13□□□□□ -0.15
SHROOM1-208ENST00000617339 SYTL3Q4VX76 610 aa14.13□□□□□ -0.15
SHROOM1-208ENST00000617339 CCNYL2Q5T2Q4 361 aa14.13□□□□□ -0.15
SHROOM1-208ENST00000617339 BROXQ5VW32 411 aa14.13□□□□□ -0.15
SHROOM1-208ENST00000617339 ANGPTL8Q6UXH0 198 aa14.13□□□□□ -0.15
SHROOM1-208ENST00000617339 VASH1Q7L8A9 365 aaPredicted RBP14.13□□□□□ -0.15
SHROOM1-208ENST00000617339 TCEAL8Q8IYN2 117 aa14.13□□□□□ -0.15
SHROOM1-208ENST00000617339 MFSD2AQ8NA29 543 aa14.13□□□□□ -0.15
SHROOM1-208ENST00000617339 PSMA8Q8TAA3 256 aa14.13□□□□□ -0.15
SHROOM1-208ENST00000617339 SDCCAG3Q96C92 435 aa14.13□□□□□ -0.15
SHROOM1-208ENST00000617339 HMG20AQ9NP66 347 aa14.13□□□□□ -0.15
SHROOM1-208ENST00000617339 PALMDQ9NP74 551 aa14.13□□□□□ -0.15
SHROOM1-208ENST00000617339 AGPAT4Q9NRZ5 378 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms