RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 SPAG7O75391 227 aa15.13■□□□□ 0.01
PCDHGC3-204ENST00000617222 KCNK5O95279 499 aa15.13■□□□□ 0.01
PCDHGC3-204ENST00000617222 GSTA1P08263 222 aa15.13■□□□□ 0.01
PCDHGC3-204ENST00000617222 NCF1P14598 390 aaPredicted RBP15.13■□□□□ 0.01
PCDHGC3-204ENST00000617222 HSD17B2P37059 387 aa15.13■□□□□ 0.01
PCDHGC3-204ENST00000617222 KPNA2P52292 529 aaKnown RBP15.13■□□□□ 0.01
PCDHGC3-204ENST00000617222 PNLIPRP1P54315 467 aa15.13■□□□□ 0.01
PCDHGC3-204ENST00000617222 E2F1Q01094 437 aa15.13■□□□□ 0.01
PCDHGC3-204ENST00000617222 FASTKQ14296 549 aaKnown RBP15.13■□□□□ 0.01
PCDHGC3-204ENST00000617222 CYP2A13Q16696 494 aa15.13■□□□□ 0.01
PCDHGC3-204ENST00000617222 TECRLQ5HYJ1 363 aa15.13■□□□□ 0.01
PCDHGC3-204ENST00000617222 N4BP2L1Q5TBK1 243 aaPredicted RBP15.13■□□□□ 0.01
PCDHGC3-204ENST00000617222 ANKS6Q68DC2 871 aa15.13■□□□□ 0.01
PCDHGC3-204ENST00000617222 ARMC6Q6NXE6 501 aa15.13■□□□□ 0.01
PCDHGC3-204ENST00000617222 EXOC3L1Q86VI1 746 aa15.13■□□□□ 0.01
PCDHGC3-204ENST00000617222 TAX1BP1Q86VP1 789 aa15.13■□□□□ 0.01
PCDHGC3-204ENST00000617222 LCA5Q86VQ0 697 aa15.13■□□□□ 0.01
PCDHGC3-204ENST00000617222 OOSP2Q86WS3 158 aa15.13■□□□□ 0.01
PCDHGC3-204ENST00000617222 SYTL1Q8IYJ3 562 aa15.13■□□□□ 0.01
PCDHGC3-204ENST00000617222 ADGRF3Q8IZF5 1079 aa15.13■□□□□ 0.01
PCDHGC3-204ENST00000617222 BANPQ8N9N5 519 aa15.13■□□□□ 0.01
PCDHGC3-204ENST00000617222 LINC01555Q8NAE3 123 aa15.13■□□□□ 0.01
PCDHGC3-204ENST00000617222 PPFIBP2Q8ND30 876 aa15.13■□□□□ 0.01
PCDHGC3-204ENST00000617222 OR2L8Q8NGY9 312 aa15.13■□□□□ 0.01
PCDHGC3-204ENST00000617222 ZNF480Q8WV37 535 aa15.13■□□□□ 0.01
PCDHGC3-204ENST00000617222 FBXL8Q96CD0 374 aa15.13■□□□□ 0.01
PCDHGC3-204ENST00000617222 ATOH8Q96SQ7 321 aa15.13■□□□□ 0.01
PCDHGC3-204ENST00000617222 EGFL8Q99944 293 aa15.13■□□□□ 0.01
PCDHGC3-204ENST00000617222 MRPL57Q9BQC6 102 aaKnown RBP15.13■□□□□ 0.01
PCDHGC3-204ENST00000617222 RAB11FIP5Q9BXF6 653 aa15.13■□□□□ 0.01
PCDHGC3-204ENST00000617222 STMN4Q9H169 189 aaPredicted RBP15.13■□□□□ 0.01
PCDHGC3-204ENST00000617222 EPB41L1Q9H4G0 881 aa15.13■□□□□ 0.01
PCDHGC3-204ENST00000617222 OR6C2Q9NZP2 312 aa15.13■□□□□ 0.01
PCDHGC3-204ENST00000617222 SENP1Q9P0U3 644 aa15.13■□□□□ 0.01
PCDHGC3-204ENST00000617222 STOX2Q9P2F5 926 aaPredicted RBP15.13■□□□□ 0.01
PCDHGC3-204ENST00000617222 CPSF2Q9P2I0 782 aaKnown RBP15.13■□□□□ 0.01
PCDHGC3-204ENST00000617222 XPR1Q9UBH6 696 aa15.13■□□□□ 0.01
PCDHGC3-204ENST00000617222 PCDHGA1Q9Y5H4 931 aa15.13■□□□□ 0.01
PCDHGC3-204ENST00000617222 ASXL3Q9C0F0 2248 aa15.13■□□□□ 0.01
PCDHGC3-204ENST00000617222 PCNX2A6NKB5 2137 aa15.13■□□□□ 0.01
PCDHGC3-204ENST00000617222 COL5A1P20908 1838 aaPredicted RBP15.13■□□□□ 0.01
PCDHGC3-204ENST00000617222 ZNF839A8K0R7 811 aa15.12■□□□□ 0.01
PCDHGC3-204ENST00000617222 SYCE1LA8MT33 242 aa15.12■□□□□ 0.01
PCDHGC3-204ENST00000617222 SUPT3HB4E1H0 165 aa15.12■□□□□ 0.01
PCDHGC3-204ENST00000617222 UBXN8O00124 270 aa15.12■□□□□ 0.01
PCDHGC3-204ENST00000617222 OPA1O60313 960 aa15.12■□□□□ 0.01
PCDHGC3-204ENST00000617222 SUPT3HO75486 399 aa15.12■□□□□ 0.01
PCDHGC3-204ENST00000617222 ANXA5P08758 320 aa15.12■□□□□ 0.01
PCDHGC3-204ENST00000617222 CHRM5P08912 532 aaPredicted RBP15.12■□□□□ 0.01
PCDHGC3-204ENST00000617222 FTH1P19P0C7X4 201 aa15.12■□□□□ 0.01
PCDHGC3-204ENST00000617222 IMPA1P29218 277 aa15.12■□□□□ 0.01
PCDHGC3-204ENST00000617222 CDKL1Q00532 357 aa15.12■□□□□ 0.01
PCDHGC3-204ENST00000617222 CFHR1Q03591 330 aa15.12■□□□□ 0.01
PCDHGC3-204ENST00000617222 PRKAA1Q13131 559 aa15.12■□□□□ 0.01
PCDHGC3-204ENST00000617222 NAE1Q13564 534 aa15.12■□□□□ 0.01
PCDHGC3-204ENST00000617222 TSTA3Q13630 321 aaPredicted RBP15.12■□□□□ 0.01
PCDHGC3-204ENST00000617222 ARHGAP19Q14CB8 494 aa15.12■□□□□ 0.01
PCDHGC3-204ENST00000617222 AGTRAPQ6RW13 159 aa15.12■□□□□ 0.01
PCDHGC3-204ENST00000617222 ARL8AQ96BM9 186 aa15.12■□□□□ 0.01
PCDHGC3-204ENST00000617222 ALKBH8Q96BT7 664 aaKnown RBP15.12■□□□□ 0.01
PCDHGC3-204ENST00000617222 ZMYND15Q9H091 742 aa15.12■□□□□ 0.01
PCDHGC3-204ENST00000617222 ATG10Q9H0Y0 220 aa15.12■□□□□ 0.01
PCDHGC3-204ENST00000617222 MRPL46Q9H2W6 279 aaKnown RBP15.12■□□□□ 0.01
PCDHGC3-204ENST00000617222 C12orf65Q9H3J6 166 aaKnown RBP15.12■□□□□ 0.01
PCDHGC3-204ENST00000617222 SPHK1Q9NYA1 384 aa15.12■□□□□ 0.01
PCDHGC3-204ENST00000617222 NUDT4Q9NZJ9 180 aa15.12■□□□□ 0.01
PCDHGC3-204ENST00000617222 GRID1Q9ULK0 1009 aa15.12■□□□□ 0.01
PCDHGC3-204ENST00000617222 CEP250Q9BV73 2442 aa15.11■□□□□ 0.01
PCDHGC3-204ENST00000617222 PIPSLA2A3N6 862 aa15.11■□□□□ 0.01
PCDHGC3-204ENST00000617222 GSAPA4D1B5 854 aa15.11■□□□□ 0.01
PCDHGC3-204ENST00000617222 ISM1B1AKI9 464 aa15.11■□□□□ 0.01
PCDHGC3-204ENST00000617222 E7ENX8 843 aa15.11■□□□□ 0.01
PCDHGC3-204ENST00000617222 TK2O00142 265 aa15.11■□□□□ 0.01
PCDHGC3-204ENST00000617222 NTN3O00634 580 aaPredicted RBP15.11■□□□□ 0.01
PCDHGC3-204ENST00000617222 DYNC1I1O14576 645 aa15.11■□□□□ 0.01
PCDHGC3-204ENST00000617222 S100BP04271 92 aaPredicted RBP15.11■□□□□ 0.01
PCDHGC3-204ENST00000617222 ERGP11308 486 aa15.11■□□□□ 0.01
PCDHGC3-204ENST00000617222 MTHFD2P13995 350 aa15.11■□□□□ 0.01
PCDHGC3-204ENST00000617222 HOXB3P14651 431 aaPredicted RBP15.11■□□□□ 0.01
PCDHGC3-204ENST00000617222 KCNA4P22459 653 aa15.11■□□□□ 0.01
PCDHGC3-204ENST00000617222 MPSTP25325 297 aa15.11■□□□□ 0.01
PCDHGC3-204ENST00000617222 CSF2RBP32927 897 aa15.11■□□□□ 0.01
PCDHGC3-204ENST00000617222 CAPZBP47756 277 aa15.11■□□□□ 0.01
PCDHGC3-204ENST00000617222 PPP1CAP62136 330 aa15.11■□□□□ 0.01
PCDHGC3-204ENST00000617222 TAP2Q03519 686 aa15.11■□□□□ 0.01
PCDHGC3-204ENST00000617222 SQSTM1Q13501 440 aa15.11■□□□□ 0.01
PCDHGC3-204ENST00000617222 ZXDCQ2QGD7 858 aaPredicted RBP15.11■□□□□ 0.01
PCDHGC3-204ENST00000617222 C18orf21Q32NC0 220 aaPredicted RBP15.11■□□□□ 0.01
PCDHGC3-204ENST00000617222 CDKL4Q5MAI5 379 aa15.11■□□□□ 0.01
PCDHGC3-204ENST00000617222 AGBL2Q5U5Z8 902 aa15.11■□□□□ 0.01
PCDHGC3-204ENST00000617222 SULT1C3Q6IMI6 304 aa15.11■□□□□ 0.01
PCDHGC3-204ENST00000617222 IRGCQ6NXR0 463 aa15.11■□□□□ 0.01
PCDHGC3-204ENST00000617222 SUSD1Q6UWL2 747 aa15.11■□□□□ 0.01
PCDHGC3-204ENST00000617222 TMEM151AQ8N4L1 468 aa15.11■□□□□ 0.01
PCDHGC3-204ENST00000617222 HMGCLL1Q8TB92 370 aa15.11■□□□□ 0.01
PCDHGC3-204ENST00000617222 ATL1Q8WXF7 558 aa15.11■□□□□ 0.01
PCDHGC3-204ENST00000617222 SMPDL3AQ92484 453 aa15.11■□□□□ 0.01
PCDHGC3-204ENST00000617222 RHBDF1Q96CC6 855 aa15.11■□□□□ 0.01
PCDHGC3-204ENST00000617222 APOPT1Q96IL0 206 aa15.11■□□□□ 0.01
PCDHGC3-204ENST00000617222 GFM1Q96RP9 751 aaKnown RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms