RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 HK3P52790 923 aa8.61□□□□□ -1.03
TTC28-208ENST00000612946 FAM98CQ17RN3 349 aaKnown RBP8.61□□□□□ -1.03
TTC28-208ENST00000612946 ATXN7L2Q5T6C5 722 aaPredicted RBP8.61□□□□□ -1.03
TTC28-208ENST00000612946 SLC22A15Q8IZD6 547 aa8.61□□□□□ -1.03
TTC28-208ENST00000612946 FAM46DQ8NEK8 389 aa8.61□□□□□ -1.03
TTC28-208ENST00000612946 OR8J3Q8NGG0 315 aa8.61□□□□□ -1.03
TTC28-208ENST00000612946 ZFP3Q96NJ6 502 aa8.61□□□□□ -1.03
TTC28-208ENST00000612946 C1QTNF7Q9BXJ2 289 aa8.61□□□□□ -1.03
TTC28-208ENST00000612946 CHIAQ9BZP6 476 aa8.61□□□□□ -1.03
TTC28-208ENST00000612946 TSPAN16Q9UKR8 245 aa8.61□□□□□ -1.03
TTC28-208ENST00000612946 RCCD1A6NED2 376 aa8.61□□□□□ -1.03
TTC28-208ENST00000612946 HNRNPLP14866 589 aaKnown RBP eCLIP8.61□□□□□ -1.037e-9■■■■□ 20.4
TTC28-208ENST00000612946 LHCGRP22888 699 aa8.61□□□□□ -1.03
TTC28-208ENST00000612946 MOGSQ13724 837 aa8.61□□□□□ -1.03
TTC28-208ENST00000612946 HHIPL2Q6UWX4 724 aa8.61□□□□□ -1.03
TTC28-208ENST00000612946 ZNF574Q6ZN55 896 aaPredicted RBP8.61□□□□□ -1.03
TTC28-208ENST00000612946 ZBTB46Q86UZ6 589 aa8.61□□□□□ -1.03
TTC28-208ENST00000612946 MAP4K3Q8IVH8 894 aa8.61□□□□□ -1.03
TTC28-208ENST00000612946 C3orf58Q8NDZ4 430 aa8.61□□□□□ -1.03
TTC28-208ENST00000612946 SPOCK3Q9BQ16 436 aa8.61□□□□□ -1.03
TTC28-208ENST00000612946 TP63Q9H3D4 680 aaPredicted RBP8.61□□□□□ -1.03
TTC28-208ENST00000612946 MINPP1Q9UNW1 487 aa8.61□□□□□ -1.03
TTC28-208ENST00000612946 BMP1P13497 986 aa8.61□□□□□ -1.03
TTC28-208ENST00000612946 PTCHD3Q3KNS1 767 aa8.61□□□□□ -1.03
TTC28-208ENST00000612946 C11orf96Q7Z7L8 435 aa8.61□□□□□ -1.03
TTC28-208ENST00000612946 UPF1Q92900 1129 aaKnown RBP eCLIP8.61□□□□□ -1.03
TTC28-208ENST00000612946 TIFAQ96CG3 184 aa8.61□□□□□ -1.03
TTC28-208ENST00000612946 ABCG8Q9H221 673 aa8.61□□□□□ -1.03
TTC28-208ENST00000612946 TBC1D17Q9HA65 648 aa8.61□□□□□ -1.03
TTC28-208ENST00000612946 CCM2LQ9NUG4 571 aaPredicted RBP8.61□□□□□ -1.03
TTC28-208ENST00000612946 MICAL2O94851 1124 aa8.61□□□□□ -1.03
TTC28-208ENST00000612946 MT-ND5P03915 603 aa8.61□□□□□ -1.03
TTC28-208ENST00000612946 MLLT3P42568 568 aaPredicted RBP8.61□□□□□ -1.03
TTC28-208ENST00000612946 CCR10P46092 362 aa8.61□□□□□ -1.03
TTC28-208ENST00000612946 CAND1Q86VP6 1230 aaKnown RBP8.61□□□□□ -1.03
TTC28-208ENST00000612946 ZNF433Q8N7K0 673 aaPredicted RBP8.61□□□□□ -1.03
TTC28-208ENST00000612946 ELOVL4Q9GZR5 314 aa8.61□□□□□ -1.03
TTC28-208ENST00000612946 A3GALT2U3KPV4 340 aa8.61□□□□□ -1.03
TTC28-208ENST00000612946 ADGRB1O14514 1584 aa8.61□□□□□ -1.03
TTC28-208ENST00000612946 RHPN2P1A8MT19 583 aa8.61□□□□□ -1.03
TTC28-208ENST00000612946 PRKCAP17252 672 aa8.61□□□□□ -1.03
TTC28-208ENST00000612946 ACTC1P68032 377 aa8.61□□□□□ -1.03
TTC28-208ENST00000612946 ACTA1P68133 377 aa8.61□□□□□ -1.03
TTC28-208ENST00000612946 SMARCB1Q12824 385 aa8.61□□□□□ -1.03
TTC28-208ENST00000612946 GPAT3Q53EU6 434 aa8.61□□□□□ -1.03
TTC28-208ENST00000612946 FAM69AQ5T7M9 428 aa8.61□□□□□ -1.03
TTC28-208ENST00000612946 PRAMEF13Q5VWM6 474 aa8.61□□□□□ -1.03
TTC28-208ENST00000612946 SETD7Q8WTS6 366 aaKnown RBP8.61□□□□□ -1.03
TTC28-208ENST00000612946 SLC22A17Q8WUG5 538 aa8.61□□□□□ -1.03
TTC28-208ENST00000612946 OR52B2Q96RD2 323 aa8.61□□□□□ -1.03
TTC28-208ENST00000612946 ARL6Q9H0F7 186 aa8.61□□□□□ -1.03
TTC28-208ENST00000612946 AXIN2Q9Y2T1 843 aa8.61□□□□□ -1.03
TTC28-208ENST00000612946 A0A1W2PP18 115 aa8.61□□□□□ -1.03
TTC28-208ENST00000612946 J3QR89 54 aa8.61□□□□□ -1.03
TTC28-208ENST00000612946 IGSF6O95976 241 aa8.61□□□□□ -1.03
TTC28-208ENST00000612946 PIGRP01833 764 aa8.61□□□□□ -1.03
TTC28-208ENST00000612946 EPORP19235 508 aa8.61□□□□□ -1.03
TTC28-208ENST00000612946 TAS2R31P59538 309 aa8.61□□□□□ -1.03
TTC28-208ENST00000612946 POU4F2Q12837 409 aa8.61□□□□□ -1.03
TTC28-208ENST00000612946 SFT2D3Q587I9 215 aa8.61□□□□□ -1.03
TTC28-208ENST00000612946 ANKRD54Q6NXT1 300 aa8.61□□□□□ -1.03
TTC28-208ENST00000612946 UBA3Q8TBC4 463 aa8.61□□□□□ -1.03
TTC28-208ENST00000612946 C10orf90Q96M02 699 aa8.61□□□□□ -1.03
TTC28-208ENST00000612946 TARS2Q9BW92 718 aaKnown RBP8.61□□□□□ -1.03
TTC28-208ENST00000612946 KLHL21Q9UJP4 597 aa8.61□□□□□ -1.03
TTC28-208ENST00000612946 FMO3P31513 532 aa8.61□□□□□ -1.03
TTC28-208ENST00000612946 ATP5C1P36542 298 aaKnown RBP8.61□□□□□ -1.03
TTC28-208ENST00000612946 PPP4CP60510 307 aa8.61□□□□□ -1.03
TTC28-208ENST00000612946 TMEM214Q6NUQ4 689 aaKnown RBP8.61□□□□□ -1.03
TTC28-208ENST00000612946 NIPA2Q8N8Q9 360 aa8.61□□□□□ -1.03
TTC28-208ENST00000612946 OR7G3Q8NG95 312 aa8.61□□□□□ -1.03
TTC28-208ENST00000612946 LNX1Q8TBB1 728 aaPredicted RBP8.61□□□□□ -1.03
TTC28-208ENST00000612946 SLC38A1Q9H2H9 487 aa8.61□□□□□ -1.03
TTC28-208ENST00000612946 WDR6Q9NNW5 1121 aaKnown RBP8.61□□□□□ -1.03
TTC28-208ENST00000612946 MAGEB17A8MXT2 336 aa8.61□□□□□ -1.03
TTC28-208ENST00000612946 TLR4O00206 839 aa8.61□□□□□ -1.03
TTC28-208ENST00000612946 CLDN9O95484 217 aa8.61□□□□□ -1.03
TTC28-208ENST00000612946 TLR1Q15399 786 aa8.61□□□□□ -1.03
TTC28-208ENST00000612946 FRRS1Q6ZNA5 592 aa8.61□□□□□ -1.03
TTC28-208ENST00000612946 C1orf216Q8TAB5 229 aa8.61□□□□□ -1.03
TTC28-208ENST00000612946 GAREM1Q9H706 876 aa8.61□□□□□ -1.03
TTC28-208ENST00000612946 CAPN3P20807 821 aa8.6□□□□□ -1.03
TTC28-208ENST00000612946 ADIGQ0VDE8 80 aa8.6□□□□□ -1.03
TTC28-208ENST00000612946 AVPI1Q5T686 147 aa8.6□□□□□ -1.03
TTC28-208ENST00000612946 CYP4X1Q8N118 509 aa8.6□□□□□ -1.03
TTC28-208ENST00000612946 TMBIM1Q969X1 311 aa8.6□□□□□ -1.03
TTC28-208ENST00000612946 RRNAD1Q96FB5 475 aaKnown RBP8.6□□□□□ -1.03
TTC28-208ENST00000612946 TTLL2Q9BWV7 592 aa8.6□□□□□ -1.03
TTC28-208ENST00000612946 C8orf33Q9H7E9 229 aaPredicted RBP8.6□□□□□ -1.03
TTC28-208ENST00000612946 GTF2IRD1Q9UHL9 959 aa8.6□□□□□ -1.03
TTC28-208ENST00000612946 KLRC4O43908 158 aa8.6□□□□□ -1.03
TTC28-208ENST00000612946 ENTPD3O75355 529 aa8.6□□□□□ -1.03
TTC28-208ENST00000612946 LGR5O75473 907 aa8.6□□□□□ -1.03
TTC28-208ENST00000612946 H2AFB2P0C5Z0 115 aa8.6□□□□□ -1.03
TTC28-208ENST00000612946 NR2C1P13056 603 aa8.6□□□□□ -1.03
TTC28-208ENST00000612946 AXLP30530 894 aa8.6□□□□□ -1.03
TTC28-208ENST00000612946 DNAJB13P59910 316 aa8.6□□□□□ -1.03
TTC28-208ENST00000612946 RHOAP61586 193 aa8.6□□□□□ -1.03
TTC28-208ENST00000612946 TXNL4AP83876 142 aaKnown RBP8.6□□□□□ -1.03
TTC28-208ENST00000612946 EIF4HQ15056 248 aaKnown RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms