RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 APOOQ9BUR5 198 aa8.68□□□□□ -1.02
CCDC47-207ENST00000612558 AKTIPQ9H8T0 292 aa8.68□□□□□ -1.02
CCDC47-207ENST00000612558 LMAN1LQ9HAT1 526 aa8.68□□□□□ -1.02
CCDC47-207ENST00000612558 TRPS1Q9UHF7 1281 aa8.68□□□□□ -1.02
CCDC47-207ENST00000612558 ZNHIT2Q9UHR6 403 aa8.68□□□□□ -1.02
CCDC47-207ENST00000612558 G3BP2Q9UN86 482 aaKnown RBP8.68□□□□□ -1.02
CCDC47-207ENST00000612558 SLC17A4Q9Y2C5 497 aa8.68□□□□□ -1.02
CCDC47-207ENST00000612558 PRKAB1Q9Y478 270 aa8.68□□□□□ -1.02
CCDC47-207ENST00000612558 PCYT1BQ9Y5K3 369 aaPredicted RBP8.68□□□□□ -1.02
CCDC47-207ENST00000612558 ST14Q9Y5Y6 855 aa8.68□□□□□ -1.02
CCDC47-207ENST00000612558 COPG1Q9Y678 874 aaKnown RBP8.68□□□□□ -1.02
CCDC47-207ENST00000612558 ATP6AP2A0A1C7CYW4 349 aa8.67□□□□□ -1.02
CCDC47-207ENST00000612558 CACNB4O00305 520 aaPredicted RBP8.67□□□□□ -1.02
CCDC47-207ENST00000612558 KCNJ13O60928 360 aa8.67□□□□□ -1.02
CCDC47-207ENST00000612558 ATP6AP2O75787 350 aa8.67□□□□□ -1.02
CCDC47-207ENST00000612558 WDR47O94967 919 aa8.67□□□□□ -1.02
CCDC47-207ENST00000612558 IGLV3-19P01714 112 aa8.67□□□□□ -1.02
CCDC47-207ENST00000612558 CAPN1P07384 714 aa8.67□□□□□ -1.02
CCDC47-207ENST00000612558 THRAP10827 490 aa8.67□□□□□ -1.02
CCDC47-207ENST00000612558 COX4I1P13073 169 aa8.67□□□□□ -1.02
CCDC47-207ENST00000612558 LBPP18428 481 aa8.67□□□□□ -1.02
CCDC47-207ENST00000612558 PIK3R1P27986 724 aa8.67□□□□□ -1.02
CCDC47-207ENST00000612558 ACADLP28330 430 aa8.67□□□□□ -1.02
CCDC47-207ENST00000612558 HMOX2P30519 316 aa8.67□□□□□ -1.02
CCDC47-207ENST00000612558 ATP4BP51164 291 aa8.67□□□□□ -1.02
CCDC47-207ENST00000612558 IRX1P78414 480 aaPredicted RBP8.67□□□□□ -1.02
CCDC47-207ENST00000612558 SQLEQ14534 574 aa8.67□□□□□ -1.02
CCDC47-207ENST00000612558 PLA2G4EQ3MJ16 856 aa8.67□□□□□ -1.02
CCDC47-207ENST00000612558 XKR7Q5GH72 579 aa8.67□□□□□ -1.02
CCDC47-207ENST00000612558 METRNLQ641Q3 311 aa8.67□□□□□ -1.02
CCDC47-207ENST00000612558 UNC5DQ6UXZ4 953 aa8.67□□□□□ -1.02
CCDC47-207ENST00000612558 Q6ZS52 159 aa8.67□□□□□ -1.02
CCDC47-207ENST00000612558 KLHDC8AQ8IYD2 350 aa8.67□□□□□ -1.02
CCDC47-207ENST00000612558 PGBD3Q8N328 593 aa8.67□□□□□ -1.02
CCDC47-207ENST00000612558 DCBLD1Q8N8Z6 715 aa8.67□□□□□ -1.02
CCDC47-207ENST00000612558 RP9Q8TA86 221 aaKnown RBP8.67□□□□□ -1.02
CCDC47-207ENST00000612558 MAGEC3Q8TD91 643 aa8.67□□□□□ -1.02
CCDC47-207ENST00000612558 TUBGCP3Q96CW5 907 aa8.67□□□□□ -1.02
CCDC47-207ENST00000612558 SHDQ96IW2 340 aa8.67□□□□□ -1.02
CCDC47-207ENST00000612558 MAGEB10Q96LZ2 347 aaPredicted RBP8.67□□□□□ -1.02
CCDC47-207ENST00000612558 TBC1D10AQ9BXI6 508 aa8.67□□□□□ -1.02
CCDC47-207ENST00000612558 ATG10Q9H0Y0 220 aa8.67□□□□□ -1.02
CCDC47-207ENST00000612558 C1orf21Q9H246 121 aa8.67□□□□□ -1.02
CCDC47-207ENST00000612558 OR52A5Q9H2C5 316 aa8.67□□□□□ -1.02
CCDC47-207ENST00000612558 DNAJC11Q9NVH1 559 aa8.67□□□□□ -1.02
CCDC47-207ENST00000612558 RIC8BQ9NVN3 520 aa8.67□□□□□ -1.02
CCDC47-207ENST00000612558 TAS2R1Q9NYW7 299 aa8.67□□□□□ -1.02
CCDC47-207ENST00000612558 USP36Q9P275 1121 aaKnown RBP8.67□□□□□ -1.02
CCDC47-207ENST00000612558 STOX2Q9P2F5 926 aaPredicted RBP8.67□□□□□ -1.02
CCDC47-207ENST00000612558 WNT16Q9UBV4 365 aa8.67□□□□□ -1.02
CCDC47-207ENST00000612558 SLC23A2Q9UGH3 650 aa8.67□□□□□ -1.02
CCDC47-207ENST00000612558 EBF1Q9UH73 591 aa8.67□□□□□ -1.02
CCDC47-207ENST00000612558 POLG2Q9UHN1 485 aa8.67□□□□□ -1.02
CCDC47-207ENST00000612558 CA14Q9ULX7 337 aa8.67□□□□□ -1.02
CCDC47-207ENST00000612558 SLC22A14Q9Y267 594 aa8.67□□□□□ -1.02
CCDC47-207ENST00000612558 BTRCQ9Y297 605 aa8.67□□□□□ -1.02
CCDC47-207ENST00000612558 PTGDR2Q9Y5Y4 395 aa8.67□□□□□ -1.02
CCDC47-207ENST00000612558 LOC100653049A0A140TA62 436 aa8.66□□□□□ -1.02
CCDC47-207ENST00000612558 FPGTO14772 594 aa8.66□□□□□ -1.02
CCDC47-207ENST00000612558 KRT34O76011 436 aa8.66□□□□□ -1.02
CCDC47-207ENST00000612558 CLDN9O95484 217 aa8.66□□□□□ -1.02
CCDC47-207ENST00000612558 CEACAM5P06731 702 aa8.66□□□□□ -1.02
CCDC47-207ENST00000612558 CELA2BP08218 269 aaPredicted RBP8.66□□□□□ -1.02
CCDC47-207ENST00000612558 EZRP15311 586 aaKnown RBP8.66□□□□□ -1.02
CCDC47-207ENST00000612558 HNRNPA2B1P22626 353 aaKnown RBP8.66□□□□□ -1.02
CCDC47-207ENST00000612558 BDKRB1P46663 353 aa8.66□□□□□ -1.02
CCDC47-207ENST00000612558 CPA2P48052 419 aa8.66□□□□□ -1.02
CCDC47-207ENST00000612558 STARD6P59095 220 aa8.66□□□□□ -1.02
CCDC47-207ENST00000612558 KIAA1024LP59773 190 aa8.66□□□□□ -1.02
CCDC47-207ENST00000612558 PFN3P60673 137 aa8.66□□□□□ -1.02
CCDC47-207ENST00000612558 STX1BP61266 288 aa8.66□□□□□ -1.02
CCDC47-207ENST00000612558 TFF2Q03403 129 aa8.66□□□□□ -1.02
CCDC47-207ENST00000612558 DMPKQ09013 629 aa8.66□□□□□ -1.02
CCDC47-207ENST00000612558 CYLC2Q14093 348 aaPredicted RBP8.66□□□□□ -1.02
CCDC47-207ENST00000612558 HERC3Q15034 1050 aa8.66□□□□□ -1.02
CCDC47-207ENST00000612558 CCSMST1Q4G0I0 132 aa8.66□□□□□ -1.02
CCDC47-207ENST00000612558 GGTA1PQ4G0N0 100 aa8.66□□□□□ -1.02
CCDC47-207ENST00000612558 FAM219BQ5XKK7 198 aa8.66□□□□□ -1.02
CCDC47-207ENST00000612558 OGFOD2Q6N063 350 aa8.66□□□□□ -1.02
CCDC47-207ENST00000612558 AGTRAPQ6RW13 159 aa8.66□□□□□ -1.02
CCDC47-207ENST00000612558 IL27RAQ6UWB1 636 aa8.66□□□□□ -1.02
CCDC47-207ENST00000612558 FAM83HQ6ZRV2 1179 aaPredicted RBP8.66□□□□□ -1.02
CCDC47-207ENST00000612558 RINLQ6ZS11 566 aa8.66□□□□□ -1.02
CCDC47-207ENST00000612558 RNF165Q6ZSG1 346 aa8.66□□□□□ -1.02
CCDC47-207ENST00000612558 SPATA19Q7Z5L4 167 aa8.66□□□□□ -1.02
CCDC47-207ENST00000612558 PDZD3Q86UT5 571 aa8.66□□□□□ -1.02
CCDC47-207ENST00000612558 ADHFE1Q8IWW8 467 aa8.66□□□□□ -1.02
CCDC47-207ENST00000612558 POU5F2Q8N7G0 328 aa8.66□□□□□ -1.02
CCDC47-207ENST00000612558 SNX31Q8N9S9 440 aa8.66□□□□□ -1.02
CCDC47-207ENST00000612558 FLCNQ8NFG4 579 aa8.66□□□□□ -1.02
CCDC47-207ENST00000612558 OR9A1PQ8NGU1 263 aa8.66□□□□□ -1.02
CCDC47-207ENST00000612558 OR56A3Q8NH54 315 aa8.66□□□□□ -1.02
CCDC47-207ENST00000612558 PYCR2Q96C36 320 aa8.66□□□□□ -1.02
CCDC47-207ENST00000612558 MARK4Q96L34 752 aa8.66□□□□□ -1.02
CCDC47-207ENST00000612558 UHRF1Q96T88 793 aaPredicted RBP8.66□□□□□ -1.02
CCDC47-207ENST00000612558 NELL2Q99435 816 aa8.66□□□□□ -1.02
CCDC47-207ENST00000612558 PKP4Q99569 1192 aa8.66□□□□□ -1.02
CCDC47-207ENST00000612558 TIMM29Q9BSF4 260 aa8.66□□□□□ -1.02
CCDC47-207ENST00000612558 SLC29A3Q9BZD2 475 aa8.66□□□□□ -1.02
CCDC47-207ENST00000612558 ZDHHC5Q9C0B5 715 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms