RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 ADIPOR2Q86V24 386 aa13.72□□□□□ -0.21
PCDHGA3-202ENST00000612467 CLVS1Q8IUQ0 354 aaPredicted RBP13.72□□□□□ -0.21
PCDHGA3-202ENST00000612467 NETO1Q8TDF5 533 aa13.72□□□□□ -0.21
PCDHGA3-202ENST00000612467 ELMO1Q92556 727 aa13.72□□□□□ -0.21
PCDHGA3-202ENST00000612467 MTERF1Q99551 399 aaKnown RBP13.72□□□□□ -0.21
PCDHGA3-202ENST00000612467 SLC32A1Q9H598 525 aa13.72□□□□□ -0.21
PCDHGA3-202ENST00000612467 ELOVL6Q9H5J4 265 aa13.72□□□□□ -0.21
PCDHGA3-202ENST00000612467 PARVBQ9HBI1 364 aa13.72□□□□□ -0.21
PCDHGA3-202ENST00000612467 MAGEL2Q9UJ55 1249 aa13.72□□□□□ -0.21
PCDHGA3-202ENST00000612467 ERVK-11Q9UQG0 969 aa13.72□□□□□ -0.21
PCDHGA3-202ENST00000612467 PCDHGA11Q9Y5H2 935 aa13.72□□□□□ -0.21
PCDHGA3-202ENST00000612467 PTPRSQ13332 1948 aa13.72□□□□□ -0.21
PCDHGA3-202ENST00000612467 EYSQ5T1H1 3165 aa13.72□□□□□ -0.21
PCDHGA3-202ENST00000612467 SLC28A1O00337 649 aa13.72□□□□□ -0.21
PCDHGA3-202ENST00000612467 SGTAO43765 313 aa13.72□□□□□ -0.21
PCDHGA3-202ENST00000612467 CTSLP07711 333 aa13.72□□□□□ -0.21
PCDHGA3-202ENST00000612467 CLTBP09497 229 aa13.72□□□□□ -0.21
PCDHGA3-202ENST00000612467 CTSAP10619 480 aa13.72□□□□□ -0.21
PCDHGA3-202ENST00000612467 PABPC1P11940 636 aaKnown RBP13.72□□□□□ -0.21
PCDHGA3-202ENST00000612467 SDC1P18827 310 aa13.72□□□□□ -0.21
PCDHGA3-202ENST00000612467 CD22P20273 847 aa13.72□□□□□ -0.21
PCDHGA3-202ENST00000612467 CAPGP40121 348 aa13.72□□□□□ -0.21
PCDHGA3-202ENST00000612467 CSNK1DP48730 415 aa13.72□□□□□ -0.21
PCDHGA3-202ENST00000612467 CTSCP53634 463 aa13.72□□□□□ -0.21
PCDHGA3-202ENST00000612467 NAA20P61599 178 aa13.72□□□□□ -0.21
PCDHGA3-202ENST00000612467 RPS14P62263 151 aaKnown RBP13.72□□□□□ -0.21
PCDHGA3-202ENST00000612467 NEDD8Q15843 81 aa13.72□□□□□ -0.21
PCDHGA3-202ENST00000612467 FXNQ16595 210 aa13.72□□□□□ -0.21
PCDHGA3-202ENST00000612467 IRAK1BP1Q5VVH5 260 aa13.72□□□□□ -0.21
PCDHGA3-202ENST00000612467 OR4F3Q6IEY1 312 aa13.72□□□□□ -0.21
PCDHGA3-202ENST00000612467 PROSER1Q86XN7 944 aa13.72□□□□□ -0.21
PCDHGA3-202ENST00000612467 CBARPQ8N350 705 aaPredicted RBP13.72□□□□□ -0.21
PCDHGA3-202ENST00000612467 FAM162AQ96A26 154 aa13.72□□□□□ -0.21
PCDHGA3-202ENST00000612467 MCCC1Q96RQ3 725 aaPredicted RBP13.72□□□□□ -0.21
PCDHGA3-202ENST00000612467 LYSMD1Q96S90 227 aa13.72□□□□□ -0.21
PCDHGA3-202ENST00000612467 TCF25Q9BQ70 676 aa13.72□□□□□ -0.21
PCDHGA3-202ENST00000612467 HAUS8Q9BT25 410 aa13.72□□□□□ -0.21
PCDHGA3-202ENST00000612467 RIOK2Q9BVS4 552 aaKnown RBP13.72□□□□□ -0.21
PCDHGA3-202ENST00000612467 ZDHHC4Q9NPG8 344 aa13.72□□□□□ -0.21
PCDHGA3-202ENST00000612467 SERHLQ9NQF3 203 aa13.72□□□□□ -0.21
PCDHGA3-202ENST00000612467 NDUFA13Q9P0J0 144 aa13.72□□□□□ -0.21
PCDHGA3-202ENST00000612467 AASSQ9UDR5 926 aa13.72□□□□□ -0.21
PCDHGA3-202ENST00000612467 TRPS1Q9UHF7 1281 aa13.72□□□□□ -0.21
PCDHGA3-202ENST00000612467 SLC8A2Q9UPR5 921 aa13.72□□□□□ -0.21
PCDHGA3-202ENST00000612467 MOSPD3O75425 235 aa13.71□□□□□ -0.21
PCDHGA3-202ENST00000612467 LINC00271P0C7V0 271 aa13.71□□□□□ -0.21
PCDHGA3-202ENST00000612467 IL7RP16871 459 aa13.71□□□□□ -0.21
PCDHGA3-202ENST00000612467 MAPK8P45983 427 aa13.71□□□□□ -0.21
PCDHGA3-202ENST00000612467 PMS2P3Q13401 168 aa13.71□□□□□ -0.21
PCDHGA3-202ENST00000612467 TRIM74Q86UV6 250 aa13.71□□□□□ -0.21
PCDHGA3-202ENST00000612467 PACRGLQ8N7B6 248 aa13.71□□□□□ -0.21
PCDHGA3-202ENST00000612467 HIC2Q96JB3 615 aa13.71□□□□□ -0.21
PCDHGA3-202ENST00000612467 PAIP1Q9H074 479 aaKnown RBP13.71□□□□□ -0.21
PCDHGA3-202ENST00000612467 RSL24D1Q9UHA3 163 aaKnown RBP13.71□□□□□ -0.21
PCDHGA3-202ENST00000612467 SLC25A13Q9UJS0 675 aa13.71□□□□□ -0.21
PCDHGA3-202ENST00000612467 KCNE1BA0A087WTH5 132 aa13.71□□□□□ -0.21
PCDHGA3-202ENST00000612467 PLK4O00444 970 aa13.71□□□□□ -0.21
PCDHGA3-202ENST00000612467 CXCR6O00574 342 aa13.71□□□□□ -0.21
PCDHGA3-202ENST00000612467 DIRAS1O95057 198 aa13.71□□□□□ -0.21
PCDHGA3-202ENST00000612467 ASLP04424 464 aa13.71□□□□□ -0.21
PCDHGA3-202ENST00000612467 OR56A5P0C7T3 313 aa13.71□□□□□ -0.21
PCDHGA3-202ENST00000612467 ATP1B2P14415 290 aaPredicted RBP13.71□□□□□ -0.21
PCDHGA3-202ENST00000612467 PIGAP37287 484 aa13.71□□□□□ -0.21
PCDHGA3-202ENST00000612467 ARSFP54793 590 aa13.71□□□□□ -0.21
PCDHGA3-202ENST00000612467 CHRNB3Q05901 458 aa13.71□□□□□ -0.21
PCDHGA3-202ENST00000612467 C16orf72Q14CZ0 275 aa13.71□□□□□ -0.21
PCDHGA3-202ENST00000612467 GDPD4Q6W3E5 623 aa13.71□□□□□ -0.21
PCDHGA3-202ENST00000612467 OR7A2PQ8NGA2 310 aa13.71□□□□□ -0.21
PCDHGA3-202ENST00000612467 UBTD2Q8WUN7 234 aa13.71□□□□□ -0.21
PCDHGA3-202ENST00000612467 ASB11Q8WXH4 323 aa13.71□□□□□ -0.21
PCDHGA3-202ENST00000612467 PAWRQ96IZ0 340 aaKnown RBP13.71□□□□□ -0.21
PCDHGA3-202ENST00000612467 BARD1Q99728 777 aaKnown RBP13.71□□□□□ -0.21
PCDHGA3-202ENST00000612467 COQ6Q9Y2Z9 468 aa13.71□□□□□ -0.21
PCDHGA3-202ENST00000612467 SPTBN5Q9NRC6 3674 aaKnown RBP13.71□□□□□ -0.22
PCDHGA3-202ENST00000612467 ABHD14A-ACY1A0A1B0GW23 586 aa13.7□□□□□ -0.22
PCDHGA3-202ENST00000612467 GRM6O15303 877 aa13.7□□□□□ -0.22
PCDHGA3-202ENST00000612467 CST1P01037 141 aa13.7□□□□□ -0.22
PCDHGA3-202ENST00000612467 FCGR1AP12314 374 aa13.7□□□□□ -0.22
PCDHGA3-202ENST00000612467 BDKRB1P46663 353 aa13.7□□□□□ -0.22
PCDHGA3-202ENST00000612467 CASP9P55211 416 aa13.7□□□□□ -0.22
PCDHGA3-202ENST00000612467 CHIT1Q13231 466 aa13.7□□□□□ -0.22
PCDHGA3-202ENST00000612467 RUNDC3AQ59EK9 446 aa13.7□□□□□ -0.22
PCDHGA3-202ENST00000612467 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.7□□□□□ -0.22
PCDHGA3-202ENST00000612467 MPP7Q5T2T1 576 aa13.7□□□□□ -0.22
PCDHGA3-202ENST00000612467 OSCP1Q8WVF1 389 aa13.7□□□□□ -0.22
PCDHGA3-202ENST00000612467 SLC47A1Q96FL8 570 aa13.7□□□□□ -0.22
PCDHGA3-202ENST00000612467 MED8Q96G25 268 aa13.7□□□□□ -0.22
PCDHGA3-202ENST00000612467 BDH2Q9BUT1 245 aa13.7□□□□□ -0.22
PCDHGA3-202ENST00000612467 RDH14Q9HBH5 336 aa13.7□□□□□ -0.22
PCDHGA3-202ENST00000612467 PCDH12Q9NPG4 1184 aa13.7□□□□□ -0.22
PCDHGA3-202ENST00000612467 CXXC1Q9P0U4 656 aaPredicted RBP13.7□□□□□ -0.22
PCDHGA3-202ENST00000612467 PADI4Q9UM07 663 aa13.7□□□□□ -0.22
PCDHGA3-202ENST00000612467 hCG_2014768A0A024R1R8 64 aa13.7□□□□□ -0.22
PCDHGA3-202ENST00000612467 ELOVL7A1L3X0 281 aa13.7□□□□□ -0.22
PCDHGA3-202ENST00000612467 TRMUO75648 421 aaKnown RBP13.7□□□□□ -0.22
PCDHGA3-202ENST00000612467 POP4O95707 220 aaKnown RBP13.7□□□□□ -0.22
PCDHGA3-202ENST00000612467 SERPINA1P01009 418 aa13.7□□□□□ -0.22
PCDHGA3-202ENST00000612467 RAP2AP10114 183 aa13.7□□□□□ -0.22
PCDHGA3-202ENST00000612467 UMPSP11172 480 aa13.7□□□□□ -0.22
PCDHGA3-202ENST00000612467 ADARB1P78563 741 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms