RNA–Protein interactions for RNA: ENST00000612286.4

HOXA3-207, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HOXA3, Length 3,396 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-207ENST00000612286 PPP2R2BQ00005 443 aa13.78□□□□□ -0.2
HOXA3-207ENST00000612286 CCDC85BQ15834 202 aaPredicted RBP13.78□□□□□ -0.2
HOXA3-207ENST00000612286 PTRH1Q86Y79 214 aaKnown RBP13.78□□□□□ -0.2
HOXA3-207ENST00000612286 CLECL1Q8IZS7 167 aa13.78□□□□□ -0.2
HOXA3-207ENST00000612286 MTERF1Q99551 399 aaKnown RBP13.78□□□□□ -0.2
HOXA3-207ENST00000612286 CEP44Q9C0F1 390 aa13.78□□□□□ -0.2
HOXA3-207ENST00000612286 TRIT1Q9H3H1 467 aaKnown RBP13.78□□□□□ -0.2
HOXA3-207ENST00000612286 MRGBPQ9NV56 204 aa13.78□□□□□ -0.2
HOXA3-207ENST00000612286 OPTCQ9UBM4 332 aa13.78□□□□□ -0.2
HOXA3-207ENST00000612286 RAPGEFL1Q9UHV5 662 aa13.78□□□□□ -0.2
HOXA3-207ENST00000612286 UGT2A1Q9Y4X1 527 aa13.78□□□□□ -0.2
HOXA3-207ENST00000612286 OR7A17O14581 309 aa13.77□□□□□ -0.2
HOXA3-207ENST00000612286 RFXANKO14593 260 aa13.77□□□□□ -0.2
HOXA3-207ENST00000612286 APOL3O95236 402 aa13.77□□□□□ -0.2
HOXA3-207ENST00000612286 CSF2P04141 144 aa13.77□□□□□ -0.2
HOXA3-207ENST00000612286 FGF1P05230 155 aa13.77□□□□□ -0.2
HOXA3-207ENST00000612286 SGSHP51688 502 aa13.77□□□□□ -0.2
HOXA3-207ENST00000612286 GALNT1Q10472 559 aaPredicted RBP13.77□□□□□ -0.2
HOXA3-207ENST00000612286 GRSF1Q12849 480 aaKnown RBP eCLIP13.77□□□□□ -0.2
HOXA3-207ENST00000612286 DUSP4Q13115 394 aa13.77□□□□□ -0.2
HOXA3-207ENST00000612286 BOP1Q14137 746 aaKnown RBP13.77□□□□□ -0.2
HOXA3-207ENST00000612286 VARS2Q5ST30 1063 aaKnown RBP13.77□□□□□ -0.2
HOXA3-207ENST00000612286 CACHD1Q5VU97 1274 aa13.77□□□□□ -0.2
HOXA3-207ENST00000612286 CCBE1Q6UXH8 406 aaPredicted RBP13.77□□□□□ -0.2
HOXA3-207ENST00000612286 MSRB3Q8IXL7 192 aa13.77□□□□□ -0.2
HOXA3-207ENST00000612286 ADGRG2Q8IZP9 1017 aa13.77□□□□□ -0.2
HOXA3-207ENST00000612286 TCAIMQ8N3R3 496 aa13.77□□□□□ -0.2
HOXA3-207ENST00000612286 GTPBP3Q969Y2 492 aaKnown RBP13.77□□□□□ -0.2
HOXA3-207ENST00000612286 ASB2Q96Q27 587 aa13.77□□□□□ -0.2
HOXA3-207ENST00000612286 PANX1Q96RD7 426 aa13.77□□□□□ -0.2
HOXA3-207ENST00000612286 TTPALQ9BTX7 342 aa13.77□□□□□ -0.2
HOXA3-207ENST00000612286 DERL2Q9GZP9 239 aa13.77□□□□□ -0.2
HOXA3-207ENST00000612286 LRTM1Q9HBL6 345 aa13.77□□□□□ -0.2
HOXA3-207ENST00000612286 RAD18Q9NS91 495 aa13.77□□□□□ -0.2
HOXA3-207ENST00000612286 SLC6A14Q9UN76 642 aa13.77□□□□□ -0.2
HOXA3-207ENST00000612286 COL1A2P08123 1366 aa13.77□□□□□ -0.21
HOXA3-207ENST00000612286 NDST3O95803 873 aa13.77□□□□□ -0.21
HOXA3-207ENST00000612286 STSP08842 583 aa13.77□□□□□ -0.21
HOXA3-207ENST00000612286 RHOQP17081 205 aa13.77□□□□□ -0.21
HOXA3-207ENST00000612286 PHC1P78364 1004 aa13.77□□□□□ -0.21
HOXA3-207ENST00000612286 HMGN2P46Q86SG4 172 aa13.77□□□□□ -0.21
HOXA3-207ENST00000612286 COPS4Q9BT78 406 aa13.77□□□□□ -0.21
HOXA3-207ENST00000612286 TMEM121BQ9BXQ6 578 aaPredicted RBP13.77□□□□□ -0.21
HOXA3-207ENST00000612286 ASB8Q9H765 288 aa13.77□□□□□ -0.21
HOXA3-207ENST00000612286 AKIP1Q9NQ31 210 aa13.77□□□□□ -0.21
HOXA3-207ENST00000612286 ADPRHL2Q9NX46 363 aa13.77□□□□□ -0.21
HOXA3-207ENST00000612286 ELOVL2Q9NXB9 296 aa13.77□□□□□ -0.21
HOXA3-207ENST00000612286 TPRKBQ9Y3C4 175 aa13.77□□□□□ -0.21
HOXA3-207ENST00000612286 IQCA1LA6NCM1 817 aa13.77□□□□□ -0.21
HOXA3-207ENST00000612286 TMEM88BA6NKF7 163 aa13.77□□□□□ -0.21
HOXA3-207ENST00000612286 CTDSP2O14595 271 aa13.77□□□□□ -0.21
HOXA3-207ENST00000612286 TULP3O75386 442 aa13.77□□□□□ -0.21
HOXA3-207ENST00000612286 KCNK2O95069 426 aa13.77□□□□□ -0.21
HOXA3-207ENST00000612286 ACPPP15309 386 aa13.77□□□□□ -0.21
HOXA3-207ENST00000612286 S100A5P33763 92 aa13.77□□□□□ -0.21
HOXA3-207ENST00000612286 ILF2Q12905 390 aaKnown RBP13.77□□□□□ -0.21
HOXA3-207ENST00000612286 GANABQ14697 944 aaKnown RBP13.77□□□□□ -0.21
HOXA3-207ENST00000612286 BEND5Q7L4P6 421 aa13.77□□□□□ -0.21
HOXA3-207ENST00000612286 OR6Q1Q8NGQ2 317 aa13.77□□□□□ -0.21
HOXA3-207ENST00000612286 FOXJ1Q92949 421 aa13.77□□□□□ -0.21
HOXA3-207ENST00000612286 CITED4Q96RK1 184 aa13.77□□□□□ -0.21
HOXA3-207ENST00000612286 TUBA1CQ9BQE3 449 aa13.77□□□□□ -0.21
HOXA3-207ENST00000612286 ACBD6Q9BR61 282 aa13.77□□□□□ -0.21
HOXA3-207ENST00000612286 CLPBQ9H078 707 aa13.77□□□□□ -0.21
HOXA3-207ENST00000612286 SIRT5Q9NXA8 310 aa13.77□□□□□ -0.21
HOXA3-207ENST00000612286 UBA2Q9UBT2 640 aaPredicted RBP13.77□□□□□ -0.21
HOXA3-207ENST00000612286 TMEFF2Q9UIK5 374 aaPredicted RBP13.77□□□□□ -0.21
HOXA3-207ENST00000612286 PRSS21Q9Y6M0 314 aa13.77□□□□□ -0.21
HOXA3-207ENST00000612286 F5H5T6 163 aa13.76□□□□□ -0.21
HOXA3-207ENST00000612286 FHP07954 510 aa13.76□□□□□ -0.21
HOXA3-207ENST00000612286 MSH3P20585 1137 aa13.76□□□□□ -0.21
HOXA3-207ENST00000612286 CYP2C18P33260 490 aa13.76□□□□□ -0.21
HOXA3-207ENST00000612286 GRK3P35626 688 aa13.76□□□□□ -0.21
HOXA3-207ENST00000612286 LRRC74AQ0VAA2 488 aa13.76□□□□□ -0.21
HOXA3-207ENST00000612286 SERINC3Q13530 473 aa13.76□□□□□ -0.21
HOXA3-207ENST00000612286 HIST2H2ACQ16777 129 aaPredicted RBP13.76□□□□□ -0.21
HOXA3-207ENST00000612286 CTXN3Q4LDR2 81 aa13.76□□□□□ -0.21
HOXA3-207ENST00000612286 FAM171A1Q5VUB5 890 aa13.76□□□□□ -0.21
HOXA3-207ENST00000612286 GDF6Q6KF10 455 aaPredicted RBP13.76□□□□□ -0.21
HOXA3-207ENST00000612286 MFSD4AQ8N468 514 aa13.76□□□□□ -0.21
HOXA3-207ENST00000612286 CARNMT1Q8N4J0 409 aa13.76□□□□□ -0.21
HOXA3-207ENST00000612286 ATP6V0D2Q8N8Y2 350 aa13.76□□□□□ -0.21
HOXA3-207ENST00000612286 VANGL1Q8TAA9 524 aaPredicted RBP13.76□□□□□ -0.21
HOXA3-207ENST00000612286 UBASH3BQ8TF42 649 aa13.76□□□□□ -0.21
HOXA3-207ENST00000612286 DNASE1L2Q92874 299 aa13.76□□□□□ -0.21
HOXA3-207ENST00000612286 RHBDF1Q96CC6 855 aa13.76□□□□□ -0.21
HOXA3-207ENST00000612286 MAF1Q9H063 256 aa13.76□□□□□ -0.21
HOXA3-207ENST00000612286 KATNBL1Q9H079 304 aa13.76□□□□□ -0.21
HOXA3-207ENST00000612286 MRM3Q9HC36 420 aaKnown RBP13.76□□□□□ -0.21
HOXA3-207ENST00000612286 PLSCR3Q9NRY6 295 aa13.76□□□□□ -0.21
HOXA3-207ENST00000612286 CD84Q9UIB8 345 aa13.76□□□□□ -0.21
HOXA3-207ENST00000612286 AGO1Q9UL18 857 aaKnown RBP13.76□□□□□ -0.21
HOXA3-207ENST00000612286 TANC1Q9C0D5 1861 aa13.76□□□□□ -0.21
HOXA3-207ENST00000612286 TRIM64A6NGJ6 449 aa13.76□□□□□ -0.21
HOXA3-207ENST00000612286 PDZK1P1A8MUH7 402 aa13.76□□□□□ -0.21
HOXA3-207ENST00000612286 H3BM21 787 aa13.76□□□□□ -0.21
HOXA3-207ENST00000612286 KPNA5O15131 536 aa13.76□□□□□ -0.21
HOXA3-207ENST00000612286 INSIG1O15503 277 aa13.76□□□□□ -0.21
HOXA3-207ENST00000612286 SDHBP21912 280 aa13.76□□□□□ -0.21
HOXA3-207ENST00000612286 GRK5P34947 590 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms