RNA–Protein interactions for RNA: ENST00000611571.4

MUC1-223, Transcript of mucin 1, cell surface associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MUC1, Length 4,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-223ENST00000611571 USP22Q9UPT9 525 aa13.55□□□□□ -0.24
MUC1-223ENST00000611571 PCDHB3Q9Y5E6 796 aa13.55□□□□□ -0.24
MUC1-223ENST00000611571 NUMBLQ9Y6R0 609 aa13.55□□□□□ -0.24
MUC1-223ENST00000611571 DENRO43583 198 aaKnown RBP13.54□□□□□ -0.24
MUC1-223ENST00000611571 IFNW1P05000 195 aa13.54□□□□□ -0.24
MUC1-223ENST00000611571 GABRB3P28472 473 aa13.54□□□□□ -0.24
MUC1-223ENST00000611571 NSG1P42857 185 aa13.54□□□□□ -0.24
MUC1-223ENST00000611571 STX4Q12846 297 aa13.54□□□□□ -0.24
MUC1-223ENST00000611571 SKIV2LQ15477 1246 aaKnown RBP13.54□□□□□ -0.24
MUC1-223ENST00000611571 ZFP69Q49AA0 526 aa13.54□□□□□ -0.24
MUC1-223ENST00000611571 FAM180BQ6P0A1 224 aa13.54□□□□□ -0.24
MUC1-223ENST00000611571 OTOP2Q7RTS6 562 aa13.54□□□□□ -0.24
MUC1-223ENST00000611571 ZMIZ2Q8NF64 920 aa13.54□□□□□ -0.24
MUC1-223ENST00000611571 SCAMP4Q969E2 229 aa13.54□□□□□ -0.24
MUC1-223ENST00000611571 PRICKLE1Q96MT3 831 aaPredicted RBP13.54□□□□□ -0.24
MUC1-223ENST00000611571 FAM210AQ96ND0 272 aa13.54□□□□□ -0.24
MUC1-223ENST00000611571 DPH2Q9BQC3 489 aaPredicted RBP13.54□□□□□ -0.24
MUC1-223ENST00000611571 TBC1D17Q9HA65 648 aa13.54□□□□□ -0.24
MUC1-223ENST00000611571 GIN1Q9NXP7 522 aa13.54□□□□□ -0.24
MUC1-223ENST00000611571 MRPS23Q9Y3D9 190 aaKnown RBP13.54□□□□□ -0.24
MUC1-223ENST00000611571 NAV1Q8NEY1 1877 aa13.54□□□□□ -0.24
MUC1-223ENST00000611571 KIF13AQ9H1H9 1805 aa13.54□□□□□ -0.24
MUC1-223ENST00000611571 LAMB4A4D0S4 1761 aa13.54□□□□□ -0.24
MUC1-223ENST00000611571 A0A1W2PRU2 124 aa13.54□□□□□ -0.24
MUC1-223ENST00000611571 GPR32O75388 356 aa13.54□□□□□ -0.24
MUC1-223ENST00000611571 APOL3O95236 402 aa13.54□□□□□ -0.24
MUC1-223ENST00000611571 CXCL14O95715 111 aa13.54□□□□□ -0.24
MUC1-223ENST00000611571 C9P02748 559 aa13.54□□□□□ -0.24
MUC1-223ENST00000611571 APLP1P51693 650 aa13.54□□□□□ -0.24
MUC1-223ENST00000611571 DNAJB13P59910 316 aa13.54□□□□□ -0.24
MUC1-223ENST00000611571 ABRAXAS2Q15018 415 aa13.54□□□□□ -0.24
MUC1-223ENST00000611571 PTPRRQ15256 657 aa13.54□□□□□ -0.24
MUC1-223ENST00000611571 QPRTQ15274 297 aa13.54□□□□□ -0.24
MUC1-223ENST00000611571 ANXA8L1Q5VT79 327 aa13.54□□□□□ -0.24
MUC1-223ENST00000611571 ENPP6Q6UWR7 440 aa13.54□□□□□ -0.24
MUC1-223ENST00000611571 SLC22A15Q8IZD6 547 aa13.54□□□□□ -0.24
MUC1-223ENST00000611571 RGL4Q8IZJ4 473 aa13.54□□□□□ -0.24
MUC1-223ENST00000611571 USP7Q93009 1102 aa13.54□□□□□ -0.24
MUC1-223ENST00000611571 RAD51AP1Q96B01 352 aa13.54□□□□□ -0.24
MUC1-223ENST00000611571 TSGA13Q96PP4 275 aa13.54□□□□□ -0.24
MUC1-223ENST00000611571 CCDC3Q9BQI4 270 aa13.54□□□□□ -0.24
MUC1-223ENST00000611571 CMTM6Q9NX76 183 aa13.54□□□□□ -0.24
MUC1-223ENST00000611571 FZD4Q9ULV1 537 aa13.54□□□□□ -0.24
MUC1-223ENST00000611571 SATB2Q9UPW6 733 aa13.54□□□□□ -0.24
MUC1-223ENST00000611571 GLTPD2A6NH11 291 aa13.54□□□□□ -0.24
MUC1-223ENST00000611571 ARMC6Q6NXE6 501 aa13.54□□□□□ -0.24
MUC1-223ENST00000611571 ZZZ3Q8IYH5 903 aa13.54□□□□□ -0.24
MUC1-223ENST00000611571 ZIM2Q9NZV7 527 aa13.54□□□□□ -0.24
MUC1-223ENST00000611571 COMMD3Q9UBI1 195 aa13.54□□□□□ -0.24
MUC1-223ENST00000611571 ZNF222Q9UK12 451 aa13.54□□□□□ -0.24
MUC1-223ENST00000611571 C7orf72A4D263 438 aa13.53□□□□□ -0.24
MUC1-223ENST00000611571 ONECUT3O60422 494 aaPredicted RBP13.53□□□□□ -0.24
MUC1-223ENST00000611571 MITFO75030 526 aaPredicted RBP13.53□□□□□ -0.24
MUC1-223ENST00000611571 NTSP30990 170 aa13.53□□□□□ -0.24
MUC1-223ENST00000611571 ACADVLP49748 655 aa13.53□□□□□ -0.24
MUC1-223ENST00000611571 MEF2AQ02078 507 aaPredicted RBP13.53□□□□□ -0.24
MUC1-223ENST00000611571 MTAPQ13126 283 aa13.53□□□□□ -0.24
MUC1-223ENST00000611571 UPP1Q16831 310 aa13.53□□□□□ -0.24
MUC1-223ENST00000611571 CXorf57Q6NSI4 855 aaKnown RBP13.53□□□□□ -0.24
MUC1-223ENST00000611571 Q6ZVU0 165 aa13.53□□□□□ -0.24
MUC1-223ENST00000611571 DNAJB7Q7Z6W7 309 aaPredicted RBP13.53□□□□□ -0.24
MUC1-223ENST00000611571 SNX29P2Q8IUI4 249 aa13.53□□□□□ -0.24
MUC1-223ENST00000611571 BEND7Q8N7W2 519 aaPredicted RBP13.53□□□□□ -0.24
MUC1-223ENST00000611571 CSGALNACT1Q8TDX6 532 aa13.53□□□□□ -0.24
MUC1-223ENST00000611571 FRS2Q8WU20 508 aa13.53□□□□□ -0.24
MUC1-223ENST00000611571 KLK6Q92876 244 aa13.53□□□□□ -0.24
MUC1-223ENST00000611571 FUBP3Q96I24 572 aaKnown RBP eCLIP13.53□□□□□ -0.24
MUC1-223ENST00000611571 HERC2P3Q9BVR0 1158 aa13.53□□□□□ -0.24
MUC1-223ENST00000611571 GSAPA4D1B5 854 aa13.53□□□□□ -0.24
MUC1-223ENST00000611571 FADS2P1A8MWK0 482 aa13.53□□□□□ -0.24
MUC1-223ENST00000611571 GADD45GO95257 159 aa13.53□□□□□ -0.24
MUC1-223ENST00000611571 PRPS2P11908 318 aa13.53□□□□□ -0.24
MUC1-223ENST00000611571 GCNT6Q5T4J0 391 aa13.53□□□□□ -0.24
MUC1-223ENST00000611571 SMARCD3Q6STE5 483 aa13.53□□□□□ -0.24
MUC1-223ENST00000611571 SVOPLQ8N434 492 aa13.53□□□□□ -0.24
MUC1-223ENST00000611571 DRAXINQ8NBI3 349 aaPredicted RBP13.53□□□□□ -0.24
MUC1-223ENST00000611571 IL12RB2Q99665 862 aa13.53□□□□□ -0.24
MUC1-223ENST00000611571 POLR2J2Q9GZM3 115 aaKnown RBP13.53□□□□□ -0.24
MUC1-223ENST00000611571 DERL2Q9GZP9 239 aa13.53□□□□□ -0.24
MUC1-223ENST00000611571 C8orf4Q9NR00 106 aa13.53□□□□□ -0.24
MUC1-223ENST00000611571 MRPL39Q9NYK5 338 aaKnown RBP13.53□□□□□ -0.24
MUC1-223ENST00000611571 GPSM3Q9Y4H4 160 aa13.53□□□□□ -0.24
MUC1-223ENST00000611571 A0A0J9YVX5 310 aa13.53□□□□□ -0.24
MUC1-223ENST00000611571 MYADML2A6NDP7 307 aa13.53□□□□□ -0.24
MUC1-223ENST00000611571 SEPT4O43236 478 aa13.53□□□□□ -0.24
MUC1-223ENST00000611571 CHRM1P11229 460 aaPredicted RBP13.53□□□□□ -0.24
MUC1-223ENST00000611571 RYKP34925 604 aa13.53□□□□□ -0.24
MUC1-223ENST00000611571 RFC2P35250 354 aa13.53□□□□□ -0.24
MUC1-223ENST00000611571 SFSWAPQ12872 951 aaKnown RBP13.53□□□□□ -0.24
MUC1-223ENST00000611571 CLEC12AQ5QGZ9 265 aa13.53□□□□□ -0.24
MUC1-223ENST00000611571 C6orf141Q5SZD1 244 aa13.53□□□□□ -0.24
MUC1-223ENST00000611571 FRG2Q64ET8 278 aa13.53□□□□□ -0.24
MUC1-223ENST00000611571 SDE2Q6IQ49 451 aa13.53□□□□□ -0.24
MUC1-223ENST00000611571 TMPRSS11AQ6ZMR5 421 aa13.53□□□□□ -0.24
MUC1-223ENST00000611571 USP30Q70CQ3 517 aa13.53□□□□□ -0.24
MUC1-223ENST00000611571 HDDC2Q7Z4H3 204 aa13.53□□□□□ -0.24
MUC1-223ENST00000611571 LGI4Q8N135 537 aa13.53□□□□□ -0.24
MUC1-223ENST00000611571 PACRGLQ8N7B6 248 aa13.53□□□□□ -0.24
MUC1-223ENST00000611571 OR10G2Q8NGC3 310 aa13.53□□□□□ -0.24
MUC1-223ENST00000611571 FRG2BQ96QU4 278 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms