RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 ASIC5Q9NY37 505 aa13.27□□□□□ -0.29
NEK3-205ENST00000610828 DLGAP4Q9Y2H0 992 aa13.27□□□□□ -0.29
NEK3-205ENST00000610828 UNC80Q8N2C7 3258 aa13.27□□□□□ -0.29
NEK3-205ENST00000610828 KCNE1BA0A087WTH5 132 aa13.26□□□□□ -0.29
NEK3-205ENST00000610828 TCRBV5S2A0A599 114 aa13.26□□□□□ -0.29
NEK3-205ENST00000610828 ARHGEF33A8MVX0 844 aa13.26□□□□□ -0.29
NEK3-205ENST00000610828 SOCS2O14508 198 aa13.26□□□□□ -0.29
NEK3-205ENST00000610828 PRAMEF4O60810 478 aa13.26□□□□□ -0.29
NEK3-205ENST00000610828 NFATC1O95644 943 aa13.26□□□□□ -0.29
NEK3-205ENST00000610828 HRH2P25021 359 aa13.26□□□□□ -0.29
NEK3-205ENST00000610828 RPS14P62263 151 aaKnown RBP13.26□□□□□ -0.29
NEK3-205ENST00000610828 CHIT1Q13231 466 aa13.26□□□□□ -0.29
NEK3-205ENST00000610828 GPM6BQ13491 265 aa13.26□□□□□ -0.29
NEK3-205ENST00000610828 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.26□□□□□ -0.29
NEK3-205ENST00000610828 PRAMEF9Q5VWM5 478 aa13.26□□□□□ -0.29
NEK3-205ENST00000610828 GLYATQ6IB77 296 aa13.26□□□□□ -0.29
NEK3-205ENST00000610828 FAM109BQ6ICB4 259 aaPredicted RBP13.26□□□□□ -0.29
NEK3-205ENST00000610828 TMEM220Q6QAJ8 160 aa13.26□□□□□ -0.29
NEK3-205ENST00000610828 PROSER1Q86XN7 944 aa13.26□□□□□ -0.29
NEK3-205ENST00000610828 ETFBKMTQ8IXQ9 262 aa13.26□□□□□ -0.29
NEK3-205ENST00000610828 L3MBTL4Q8NA19 623 aa13.26□□□□□ -0.29
NEK3-205ENST00000610828 TRPV3Q8NET8 790 aa13.26□□□□□ -0.29
NEK3-205ENST00000610828 OR52E6Q96RD3 313 aa13.26□□□□□ -0.29
NEK3-205ENST00000610828 SEPHS2Q99611 448 aa13.26□□□□□ -0.29
NEK3-205ENST00000610828 CERS4Q9HA82 394 aa13.26□□□□□ -0.29
NEK3-205ENST00000610828 DEC1Q9P2X7 70 aa13.26□□□□□ -0.29
NEK3-205ENST00000610828 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.26□□□□□ -0.29
NEK3-205ENST00000610828 TRANK1O15050 2925 aa13.26□□□□□ -0.29
NEK3-205ENST00000610828 NUP210Q8TEM1 1887 aaPredicted RBP13.26□□□□□ -0.29
NEK3-205ENST00000610828 EME2A4GXA9 379 aaPredicted RBP13.25□□□□□ -0.29
NEK3-205ENST00000610828 AP1G1O43747 822 aa13.25□□□□□ -0.29
NEK3-205ENST00000610828 PSIP1O75475 530 aaKnown RBP13.25□□□□□ -0.29
NEK3-205ENST00000610828 POU2F2P09086 479 aa13.25□□□□□ -0.29
NEK3-205ENST00000610828 PEX19P40855 299 aa13.25□□□□□ -0.29
NEK3-205ENST00000610828 PRLHRP49683 370 aa13.25□□□□□ -0.29
NEK3-205ENST00000610828 OR8J3Q8NGG0 315 aa13.25□□□□□ -0.29
NEK3-205ENST00000610828 FBXL8Q96CD0 374 aa13.25□□□□□ -0.29
NEK3-205ENST00000610828 DTD2Q96FN9 168 aa13.25□□□□□ -0.29
NEK3-205ENST00000610828 MED8Q96G25 268 aa13.25□□□□□ -0.29
NEK3-205ENST00000610828 CCM2Q9BSQ5 444 aa13.25□□□□□ -0.29
NEK3-205ENST00000610828 THUMPD3Q9BV44 507 aaKnown RBP13.25□□□□□ -0.29
NEK3-205ENST00000610828 OSBPL11Q9BXB4 747 aa13.25□□□□□ -0.29
NEK3-205ENST00000610828 ANAPC2Q9UJX6 822 aa13.25□□□□□ -0.29
NEK3-205ENST00000610828 NEUROG3Q9Y4Z2 214 aa13.25□□□□□ -0.29
NEK3-205ENST00000610828 PCDHB3Q9Y5E6 796 aa13.25□□□□□ -0.29
NEK3-205ENST00000610828 REV3LO60673 3130 aa13.25□□□□□ -0.29
NEK3-205ENST00000610828 CROCCQ5TZA2 2017 aa13.25□□□□□ -0.29
NEK3-205ENST00000610828 KANSL1LA0AUZ9 987 aa13.25□□□□□ -0.29
NEK3-205ENST00000610828 PDLIM1O00151 329 aa13.25□□□□□ -0.29
NEK3-205ENST00000610828 PLK4O00444 970 aa13.25□□□□□ -0.29
NEK3-205ENST00000610828 IRF8Q02556 426 aa13.25□□□□□ -0.29
NEK3-205ENST00000610828 FRG2Q64ET8 278 aa13.25□□□□□ -0.29
NEK3-205ENST00000610828 IYDQ6PHW0 289 aa13.25□□□□□ -0.29
NEK3-205ENST00000610828 CYP2U1Q7Z449 544 aa13.25□□□□□ -0.29
NEK3-205ENST00000610828 TRIM74Q86UV6 250 aa13.25□□□□□ -0.29
NEK3-205ENST00000610828 SFTPA1Q8IWL2 248 aa13.25□□□□□ -0.29
NEK3-205ENST00000610828 NPAS3Q8IXF0 933 aa13.25□□□□□ -0.29
NEK3-205ENST00000610828 NRSN1Q8IZ57 195 aa13.25□□□□□ -0.29
NEK3-205ENST00000610828 RNF175Q8N4F7 328 aa13.25□□□□□ -0.29
NEK3-205ENST00000610828 DTWD1Q8N5C7 304 aa13.25□□□□□ -0.29
NEK3-205ENST00000610828 BIRC7Q96CA5 298 aa13.25□□□□□ -0.29
NEK3-205ENST00000610828 ERLEC1Q96DZ1 483 aa13.25□□□□□ -0.29
NEK3-205ENST00000610828 NSMCE2Q96MF7 247 aa13.25□□□□□ -0.29
NEK3-205ENST00000610828 ASB16Q96NS5 453 aa13.25□□□□□ -0.29
NEK3-205ENST00000610828 TSSK3Q96PN8 268 aa13.25□□□□□ -0.29
NEK3-205ENST00000610828 FRG2BQ96QU4 278 aa13.25□□□□□ -0.29
NEK3-205ENST00000610828 MAGEL2Q9UJ55 1249 aa13.25□□□□□ -0.29
NEK3-205ENST00000610828 TCF20Q9UGU0 1960 aaKnown RBP13.25□□□□□ -0.29
NEK3-205ENST00000610828 ARHGAP10A1A4S6 786 aa13.24□□□□□ -0.29
NEK3-205ENST00000610828 PSMD11O00231 422 aa13.24□□□□□ -0.29
NEK3-205ENST00000610828 SPINT1O43278 529 aa13.24□□□□□ -0.29
NEK3-205ENST00000610828 TNFAIP8O95379 198 aa13.24□□□□□ -0.29
NEK3-205ENST00000610828 PGM3O95394 542 aa13.24□□□□□ -0.29
NEK3-205ENST00000610828 MT-ND1P03886 318 aa13.24□□□□□ -0.29
NEK3-205ENST00000610828 CATP04040 527 aaKnown RBP13.24□□□□□ -0.29
NEK3-205ENST00000610828 FAM58BPP0C7Q3 252 aa13.24□□□□□ -0.29
NEK3-205ENST00000610828 UMPSP11172 480 aa13.24□□□□□ -0.29
NEK3-205ENST00000610828 FCGR1AP12314 374 aa13.24□□□□□ -0.29
NEK3-205ENST00000610828 JUPP14923 745 aa13.24□□□□□ -0.29
NEK3-205ENST00000610828 TACR1P25103 407 aa13.24□□□□□ -0.29
NEK3-205ENST00000610828 PDHA2P29803 388 aa13.24□□□□□ -0.29
NEK3-205ENST00000610828 GRIA2P42262 883 aa13.24□□□□□ -0.29
NEK3-205ENST00000610828 BDKRB1P46663 353 aa13.24□□□□□ -0.29
NEK3-205ENST00000610828 MYBPC1Q00872 1141 aa13.24□□□□□ -0.29
NEK3-205ENST00000610828 NAE1Q13564 534 aa13.24□□□□□ -0.29
NEK3-205ENST00000610828 KCNC3Q14003 757 aa13.24□□□□□ -0.29
NEK3-205ENST00000610828 FXNQ16595 210 aa13.24□□□□□ -0.29
NEK3-205ENST00000610828 HNRNPA1L2Q32P51 320 aaKnown RBP13.24□□□□□ -0.29
NEK3-205ENST00000610828 CCSMST1Q4G0I0 132 aa13.24□□□□□ -0.29
NEK3-205ENST00000610828 XKR6Q5GH73 641 aa13.24□□□□□ -0.29
NEK3-205ENST00000610828 C9orf64Q5T6V5 341 aa13.24□□□□□ -0.29
NEK3-205ENST00000610828 PDE12Q6L8Q7 609 aaKnown RBP13.24□□□□□ -0.29
NEK3-205ENST00000610828 PPP4R4Q6NUP7 873 aa13.24□□□□□ -0.29
NEK3-205ENST00000610828 THOC6Q86W42 341 aaKnown RBP13.24□□□□□ -0.29
NEK3-205ENST00000610828 GALNT13Q8IUC8 556 aa13.24□□□□□ -0.29
NEK3-205ENST00000610828 CBR4Q8N4T8 237 aa13.24□□□□□ -0.29
NEK3-205ENST00000610828 VN1R2Q8NFZ6 395 aa13.24□□□□□ -0.29
NEK3-205ENST00000610828 OR8D1Q8WZ84 308 aa13.24□□□□□ -0.29
NEK3-205ENST00000610828 GLMNQ92990 594 aa13.24□□□□□ -0.29
NEK3-205ENST00000610828 ARRDC3Q96B67 414 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms