RNA–Protein interactions for RNA: ENST00000610488.4

PPHLN1-223, Transcript of periphilin 1, human

TSL 5 BASIC

Gene PPHLN1, Length 1,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPHLN1-223	ENST00000610488	DCUN1D1	Q96GG9	259 aa		13.23	□□□□□ -0.29
PPHLN1-223	ENST00000610488	SLC46A1	Q96NT5	459 aa		13.23	□□□□□ -0.29
PPHLN1-223	ENST00000610488	CYP4F12	Q9HCS2	524 aa		13.23	□□□□□ -0.29
PPHLN1-223	ENST00000610488	ACSS2	Q9NR19	701 aa		13.23	□□□□□ -0.29
PPHLN1-223	ENST00000610488	DCTN4	Q9UJW0	460 aa		13.23	□□□□□ -0.29
PPHLN1-223	ENST00000610488	PCDHGA8	Q9Y5G5	932 aa		13.23	□□□□□ -0.29
PPHLN1-223	ENST00000610488	NPEPPSL1	A6NEC2	478 aa		13.22	□□□□□ -0.29
PPHLN1-223	ENST00000610488		D6RAR5	112 aa		13.22	□□□□□ -0.29
PPHLN1-223	ENST00000610488	CFAP99	D6REC4	459 aa		13.22	□□□□□ -0.29
PPHLN1-223	ENST00000610488	BTN3A1	O00481	513 aa		13.22	□□□□□ -0.29
PPHLN1-223	ENST00000610488	NTN3	O00634	580 aa	Predicted RBP	13.22	□□□□□ -0.29
PPHLN1-223	ENST00000610488	SMIM24	O75264	130 aa		13.22	□□□□□ -0.29
PPHLN1-223	ENST00000610488	MTX2	O75431	263 aa		13.22	□□□□□ -0.29
PPHLN1-223	ENST00000610488	TSPAN12	O95859	305 aa		13.22	□□□□□ -0.29
PPHLN1-223	ENST00000610488	OR56A5	P0C7T3	313 aa		13.22	□□□□□ -0.29
PPHLN1-223	ENST00000610488	KIT	P10721	976 aa		13.22	□□□□□ -0.29
PPHLN1-223	ENST00000610488	ATP1B2	P14415	290 aa	Predicted RBP	13.22	□□□□□ -0.29
PPHLN1-223	ENST00000610488	MSH3	P20585	1137 aa		13.22	□□□□□ -0.29
PPHLN1-223	ENST00000610488	ARRB2	P32121	409 aa		13.22	□□□□□ -0.29
PPHLN1-223	ENST00000610488	KCNC1	P48547	511 aa		13.22	□□□□□ -0.29
PPHLN1-223	ENST00000610488	NAGLU	P54802	743 aa		13.22	□□□□□ -0.29
PPHLN1-223	ENST00000610488	DNAJB13	P59910	316 aa		13.22	□□□□□ -0.29
PPHLN1-223	ENST00000610488	IFT88	Q13099	833 aa		13.22	□□□□□ -0.29
PPHLN1-223	ENST00000610488	IGF2-AS	Q6U949	168 aa		13.22	□□□□□ -0.29
PPHLN1-223	ENST00000610488	C6orf89	Q6UWU4	347 aa		13.22	□□□□□ -0.29
PPHLN1-223	ENST00000610488	DET1	Q7L5Y6	550 aa		13.22	□□□□□ -0.29
PPHLN1-223	ENST00000610488	SLC22A9	Q8IVM8	553 aa		13.22	□□□□□ -0.29
PPHLN1-223	ENST00000610488	PELI3	Q8N2H9	469 aa		13.22	□□□□□ -0.29
PPHLN1-223	ENST00000610488	FBXO39	Q8N4B4	442 aa		13.22	□□□□□ -0.29
PPHLN1-223	ENST00000610488	FAM46D	Q8NEK8	389 aa		13.22	□□□□□ -0.29
PPHLN1-223	ENST00000610488	RHEBL1	Q8TAI7	183 aa		13.22	□□□□□ -0.29
PPHLN1-223	ENST00000610488	STAG3L4	Q8TBR4	150 aa		13.22	□□□□□ -0.29
PPHLN1-223	ENST00000610488	MOCOS	Q96EN8	888 aa		13.22	□□□□□ -0.29
PPHLN1-223	ENST00000610488	PRR11	Q96HE9	360 aa	Predicted RBP	13.22	□□□□□ -0.29
PPHLN1-223	ENST00000610488	VPS35	Q96QK1	796 aa		13.22	□□□□□ -0.29
PPHLN1-223	ENST00000610488	PANX3	Q96QZ0	392 aa		13.22	□□□□□ -0.29
PPHLN1-223	ENST00000610488	SORT1	Q99523	831 aa		13.22	□□□□□ -0.29
PPHLN1-223	ENST00000610488	LGR4	Q9BXB1	951 aa		13.22	□□□□□ -0.29
PPHLN1-223	ENST00000610488	DPH1	Q9BZG8	443 aa		13.22	□□□□□ -0.29
PPHLN1-223	ENST00000610488	STRADB	Q9C0K7	418 aa		13.22	□□□□□ -0.29
PPHLN1-223	ENST00000610488	TMEM168	Q9H0V1	697 aa		13.22	□□□□□ -0.29
PPHLN1-223	ENST00000610488	MARCO	Q9UEW3	520 aa	Predicted RBP	13.22	□□□□□ -0.29
PPHLN1-223	ENST00000610488	TSR3	Q9UJK0	312 aa	Known RBP	13.22	□□□□□ -0.29
PPHLN1-223	ENST00000610488	IKZF3	Q9UKT9	509 aa		13.22	□□□□□ -0.29
PPHLN1-223	ENST00000610488	RNF112	Q9ULX5	631 aa		13.22	□□□□□ -0.29
PPHLN1-223	ENST00000610488	DNAJC16	Q9Y2G8	782 aa		13.22	□□□□□ -0.29
PPHLN1-223	ENST00000610488	DGKB	Q9Y6T7	804 aa		13.22	□□□□□ -0.29
PPHLN1-223	ENST00000610488	UBXN8	O00124	270 aa		13.21	□□□□□ -0.29
PPHLN1-223	ENST00000610488	CDC7	O00311	574 aa		13.21	□□□□□ -0.29
PPHLN1-223	ENST00000610488	KERA	O60938	352 aa		13.21	□□□□□ -0.29
PPHLN1-223	ENST00000610488	C1QL1	O75973	258 aa		13.21	□□□□□ -0.29
PPHLN1-223	ENST00000610488	IPO13	O94829	963 aa	Known RBP	13.21	□□□□□ -0.29
PPHLN1-223	ENST00000610488	HGF	P14210	728 aa		13.21	□□□□□ -0.29
PPHLN1-223	ENST00000610488	INHBC	P55103	352 aa		13.21	□□□□□ -0.29
PPHLN1-223	ENST00000610488	TSN	Q15631	228 aa	Known RBP	13.21	□□□□□ -0.29
PPHLN1-223	ENST00000610488	LDLRAP1	Q5SW96	308 aa		13.21	□□□□□ -0.29
PPHLN1-223	ENST00000610488	PNCK	Q6P2M8	343 aa		13.21	□□□□□ -0.29
PPHLN1-223	ENST00000610488	ATG14	Q6ZNE5	492 aa		13.21	□□□□□ -0.29
PPHLN1-223	ENST00000610488	ZNF765	Q7L2R6	523 aa		13.21	□□□□□ -0.29
PPHLN1-223	ENST00000610488	RAB11FIP2	Q7L804	512 aa		13.21	□□□□□ -0.29
PPHLN1-223	ENST00000610488	SFTPA2	Q8IWL1	248 aa		13.21	□□□□□ -0.29
PPHLN1-223	ENST00000610488	ZBTB2	Q8N680	514 aa		13.21	□□□□□ -0.29
PPHLN1-223	ENST00000610488	CCNYL1	Q8N7R7	359 aa		13.21	□□□□□ -0.29
PPHLN1-223	ENST00000610488	DDHD1	Q8NEL9	900 aa		13.21	□□□□□ -0.29
PPHLN1-223	ENST00000610488	OR6C4	Q8NGE1	309 aa		13.21	□□□□□ -0.29
PPHLN1-223	ENST00000610488	CCL4L1	Q8NHW4	92 aa		13.21	□□□□□ -0.29
PPHLN1-223	ENST00000610488	GLYATL1	Q969I3	302 aa		13.21	□□□□□ -0.29
PPHLN1-223	ENST00000610488	PHF21B	Q96EK2	531 aa		13.21	□□□□□ -0.29
PPHLN1-223	ENST00000610488	ATOH8	Q96SQ7	321 aa		13.21	□□□□□ -0.29
PPHLN1-223	ENST00000610488	PLCD4	Q9BRC7	762 aa		13.21	□□□□□ -0.29
PPHLN1-223	ENST00000610488	LRRN3	Q9H3W5	708 aa		13.21	□□□□□ -0.29
PPHLN1-223	ENST00000610488	DPEP2	Q9H4A9	486 aa		13.21	□□□□□ -0.29
PPHLN1-223	ENST00000610488	CARS2	Q9HA77	564 aa	Known RBP	13.21	□□□□□ -0.29
PPHLN1-223	ENST00000610488	SPATS2L	Q9NUQ6	558 aa	Known RBP	13.21	□□□□□ -0.29
PPHLN1-223	ENST00000610488	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	13.21	□□□□□ -0.29
PPHLN1-223	ENST00000610488	USH1C	Q9Y6N9	552 aa		13.21	□□□□□ -0.29
PPHLN1-223	ENST00000610488		A0A0G2JND7	137 aa		13.2	□□□□□ -0.3
PPHLN1-223	ENST00000610488		A0A1W2PQM1	296 aa		13.2	□□□□□ -0.3
PPHLN1-223	ENST00000610488	PRSS38	A1L453	326 aa		13.2	□□□□□ -0.3
PPHLN1-223	ENST00000610488	CDRT15L2	A8MXV6	281 aa		13.2	□□□□□ -0.3
PPHLN1-223	ENST00000610488	SUPT3H	B4E1H0	165 aa		13.2	□□□□□ -0.3
PPHLN1-223	ENST00000610488	PLD2	O14939	933 aa		13.2	□□□□□ -0.3
PPHLN1-223	ENST00000610488	INPP4B	O15327	924 aa		13.2	□□□□□ -0.3
PPHLN1-223	ENST00000610488	SUPT3H	O75486	399 aa		13.2	□□□□□ -0.3
PPHLN1-223	ENST00000610488	TPBGL	P0DKB5	382 aa		13.2	□□□□□ -0.3
PPHLN1-223	ENST00000610488	GPR1	P46091	355 aa		13.2	□□□□□ -0.3
PPHLN1-223	ENST00000610488	RGS4	P49798	205 aa		13.2	□□□□□ -0.3
PPHLN1-223	ENST00000610488	ARFIP2	P53365	341 aa		13.2	□□□□□ -0.3
PPHLN1-223	ENST00000610488	RCN2	Q14257	317 aa		13.2	□□□□□ -0.3
PPHLN1-223	ENST00000610488	KHDC1	Q4VXA5	237 aa	Known RBP	13.2	□□□□□ -0.3
PPHLN1-223	ENST00000610488	CFAP157	Q5JU67	520 aa		13.2	□□□□□ -0.3
PPHLN1-223	ENST00000610488	ZNF648	Q5T619	568 aa	Predicted RBP	13.2	□□□□□ -0.3
PPHLN1-223	ENST00000610488	RAET1G	Q6H3X3	334 aa		13.2	□□□□□ -0.3
PPHLN1-223	ENST00000610488	HEATR4	Q86WZ0	1026 aa		13.2	□□□□□ -0.3
PPHLN1-223	ENST00000610488	GPR156	Q8NFN8	814 aa		13.2	□□□□□ -0.3
PPHLN1-223	ENST00000610488	PIWIL2	Q8TC59	973 aa	Known RBP	13.2	□□□□□ -0.3
PPHLN1-223	ENST00000610488	LIN37	Q96GY3	246 aa	Predicted RBP	13.2	□□□□□ -0.3
PPHLN1-223	ENST00000610488	RMDN2	Q96LZ7	410 aa		13.2	□□□□□ -0.3
PPHLN1-223	ENST00000610488	TMEM74	Q96NL1	305 aa		13.2	□□□□□ -0.3
PPHLN1-223	ENST00000610488	TMEM237	Q96Q45	408 aa		13.2	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms