RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 GATA5Q9BWX5 397 aaPredicted RBP12.83□□□□□ -0.36
USP6NL-205ENST00000609104 PNO1Q9NRX1 252 aaKnown RBP12.83□□□□□ -0.36
USP6NL-205ENST00000609104 CNTN6Q9UQ52 1028 aa12.83□□□□□ -0.36
USP6NL-205ENST00000609104 RIMS1Q86UR5 1692 aaKnown RBP12.83□□□□□ -0.36
USP6NL-205ENST00000609104 TGFB1P01137 390 aa12.83□□□□□ -0.36
USP6NL-205ENST00000609104 RBM34P42696 430 aaKnown RBP12.83□□□□□ -0.36
USP6NL-205ENST00000609104 CYP2U1Q7Z449 544 aa12.83□□□□□ -0.36
USP6NL-205ENST00000609104 ATAD1Q8NBU5 361 aa12.83□□□□□ -0.36
USP6NL-205ENST00000609104 ZNF471Q9BX82 626 aaPredicted RBP12.83□□□□□ -0.36
USP6NL-205ENST00000609104 TLE6Q9H808 572 aa12.83□□□□□ -0.36
USP6NL-205ENST00000609104 TTC34A8MYJ7 566 aa12.83□□□□□ -0.36
USP6NL-205ENST00000609104 ZNF878C9JN71 531 aa12.83□□□□□ -0.36
USP6NL-205ENST00000609104 CBLBQ13191 982 aa12.83□□□□□ -0.36
USP6NL-205ENST00000609104 HGSNATQ68CP4 663 aa12.83□□□□□ -0.36
USP6NL-205ENST00000609104 STON2Q8WXE9 905 aa12.83□□□□□ -0.36
USP6NL-205ENST00000609104 POLR3BQ9NW08 1133 aaPredicted RBP12.83□□□□□ -0.36
USP6NL-205ENST00000609104 ELOVL2Q9NXB9 296 aa12.83□□□□□ -0.36
USP6NL-205ENST00000609104 RPL36Q9Y3U8 105 aaKnown RBP12.83□□□□□ -0.36
USP6NL-205ENST00000609104 SLC31A1O15431 190 aa12.83□□□□□ -0.36
USP6NL-205ENST00000609104 HK1P19367 917 aa12.83□□□□□ -0.36
USP6NL-205ENST00000609104 MAT2AP31153 395 aaKnown RBP12.83□□□□□ -0.36
USP6NL-205ENST00000609104 PTGIRP43119 386 aa12.83□□□□□ -0.36
USP6NL-205ENST00000609104 OR12D2P58182 307 aa12.83□□□□□ -0.36
USP6NL-205ENST00000609104 FKBP1CQ5VVH2 108 aa12.83□□□□□ -0.36
USP6NL-205ENST00000609104 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.83□□□□□ -0.36
USP6NL-205ENST00000609104 PRSS58Q8IYP2 241 aa12.83□□□□□ -0.36
USP6NL-205ENST00000609104 BRSK1Q8TDC3 778 aa12.83□□□□□ -0.36
USP6NL-205ENST00000609104 EBF4Q9BQW3 602 aa12.83□□□□□ -0.36
USP6NL-205ENST00000609104 MRPS30Q9NP92 439 aaKnown RBP12.83□□□□□ -0.36
USP6NL-205ENST00000609104 LOC100509620A0A075B734 347 aa12.82□□□□□ -0.36
USP6NL-205ENST00000609104 A0A0G2JPF8 293 aa12.82□□□□□ -0.36
USP6NL-205ENST00000609104 RHPN2P1A8MT19 583 aa12.82□□□□□ -0.36
USP6NL-205ENST00000609104 HNRNPCL3B7ZW38 293 aa12.82□□□□□ -0.36
USP6NL-205ENST00000609104 SLC33A1O00400 549 aaPredicted RBP12.82□□□□□ -0.36
USP6NL-205ENST00000609104 IFNA7P01567 189 aa12.82□□□□□ -0.36
USP6NL-205ENST00000609104 TACSTD2P09758 323 aa12.82□□□□□ -0.36
USP6NL-205ENST00000609104 HNRNPCL4P0DMR1 293 aa12.82□□□□□ -0.36
USP6NL-205ENST00000609104 MPIP34949 423 aa12.82□□□□□ -0.36
USP6NL-205ENST00000609104 PCBP2Q15366 365 aaKnown RBP eCLIP12.82□□□□□ -0.366e-7■■■■□ 25.8
USP6NL-205ENST00000609104 OR10G2Q8NGC3 310 aa12.82□□□□□ -0.36
USP6NL-205ENST00000609104 ADAD1Q96M93 576 aaKnown RBP12.82□□□□□ -0.36
USP6NL-205ENST00000609104 DUS2Q9NX74 493 aaKnown RBP12.82□□□□□ -0.36
USP6NL-205ENST00000609104 TMEM5Q9Y2B1 443 aa12.82□□□□□ -0.36
USP6NL-205ENST00000609104 COL1A2P08123 1366 aa12.82□□□□□ -0.36
USP6NL-205ENST00000609104 SMIM35A0A1B0GVV1 85 aa12.82□□□□□ -0.36
USP6NL-205ENST00000609104 FAM234BA2RU67 622 aa12.82□□□□□ -0.36
USP6NL-205ENST00000609104 FCER2P06734 321 aa12.82□□□□□ -0.36
USP6NL-205ENST00000609104 SLURP2P0DP57 97 aa12.82□□□□□ -0.36
USP6NL-205ENST00000609104 CREB1P16220 341 aa12.82□□□□□ -0.36
USP6NL-205ENST00000609104 RGS19P49795 217 aa12.82□□□□□ -0.36
USP6NL-205ENST00000609104 ARPC4P59998 168 aa12.82□□□□□ -0.36
USP6NL-205ENST00000609104 SPIN3Q5JUX0 258 aa12.82□□□□□ -0.36
USP6NL-205ENST00000609104 SLC22A16Q86VW1 577 aa12.82□□□□□ -0.36
USP6NL-205ENST00000609104 MPP5Q8N3R9 675 aa12.82□□□□□ -0.36
USP6NL-205ENST00000609104 CCDC86Q9H6F5 360 aaKnown RBP12.82□□□□□ -0.36
USP6NL-205ENST00000609104 SLC7A1P30825 629 aa12.82□□□□□ -0.36
USP6NL-205ENST00000609104 GPR68Q15743 365 aa12.82□□□□□ -0.36
USP6NL-205ENST00000609104 TREML2Q5T2D2 321 aa12.82□□□□□ -0.36
USP6NL-205ENST00000609104 ZNF598Q86UK7 904 aaKnown RBP12.82□□□□□ -0.36
USP6NL-205ENST00000609104 TMEM17Q86X19 198 aa12.82□□□□□ -0.36
USP6NL-205ENST00000609104 SLC30A8Q8IWU4 369 aa12.82□□□□□ -0.36
USP6NL-205ENST00000609104 OR2L2Q8NH16 312 aa12.82□□□□□ -0.36
USP6NL-205ENST00000609104 RUVBL1Q9Y265 456 aaKnown RBP12.82□□□□□ -0.36
USP6NL-205ENST00000609104 SMCO3A2RU48 225 aa12.82□□□□□ -0.36
USP6NL-205ENST00000609104 EVX2Q03828 476 aa12.82□□□□□ -0.36
USP6NL-205ENST00000609104 IL4I1Q96RQ9 567 aa12.82□□□□□ -0.36
USP6NL-205ENST00000609104 TTYH2Q9BSA4 534 aa12.82□□□□□ -0.36
USP6NL-205ENST00000609104 TBC1D14Q9P2M4 693 aa12.82□□□□□ -0.36
USP6NL-205ENST00000609104 LOC100130705A0A1B0GUX0 176 aa12.82□□□□□ -0.36
USP6NL-205ENST00000609104 ITM2AO43736 263 aa12.82□□□□□ -0.36
USP6NL-205ENST00000609104 TUSC3Q13454 348 aa12.82□□□□□ -0.36
USP6NL-205ENST00000609104 PRKD1Q15139 912 aaPredicted RBP12.82□□□□□ -0.36
USP6NL-205ENST00000609104 ABHD15Q6UXT9 468 aa12.82□□□□□ -0.36
USP6NL-205ENST00000609104 PIGWQ7Z7B1 504 aa12.82□□□□□ -0.36
USP6NL-205ENST00000609104 MIPEPQ99797 713 aa12.82□□□□□ -0.36
USP6NL-205ENST00000609104 LGALS13Q9UHV8 139 aa12.82□□□□□ -0.36
USP6NL-205ENST00000609104 SLC22A1O15245 554 aa12.82□□□□□ -0.36
USP6NL-205ENST00000609104 UBXN7O94888 489 aa12.82□□□□□ -0.36
USP6NL-205ENST00000609104 APOL3O95236 402 aa12.82□□□□□ -0.36
USP6NL-205ENST00000609104 NDST2P52849 883 aa12.82□□□□□ -0.36
USP6NL-205ENST00000609104 C6orf183Q5T699 404 aa12.82□□□□□ -0.36
USP6NL-205ENST00000609104 RAB12Q6IQ22 244 aa12.82□□□□□ -0.36
USP6NL-205ENST00000609104 GLB1L3Q8NCI6 653 aaPredicted RBP12.82□□□□□ -0.36
USP6NL-205ENST00000609104 SLC13A3Q8WWT9 602 aa12.82□□□□□ -0.36
USP6NL-205ENST00000609104 ASB12Q8WXK4 309 aa12.82□□□□□ -0.36
USP6NL-205ENST00000609104 SLC35A5Q9BS91 424 aa12.82□□□□□ -0.36
USP6NL-205ENST00000609104 TRIM64A6NGJ6 449 aa12.82□□□□□ -0.36
USP6NL-205ENST00000609104 TREHO43280 583 aa12.82□□□□□ -0.36
USP6NL-205ENST00000609104 RPP14O95059 124 aaKnown RBP12.82□□□□□ -0.36
USP6NL-205ENST00000609104 RAB11FIP2Q7L804 512 aa12.82□□□□□ -0.36
USP6NL-205ENST00000609104 ZNF676Q8N7Q3 588 aa12.82□□□□□ -0.36
USP6NL-205ENST00000609104 NKD2Q969F2 451 aaPredicted RBP12.82□□□□□ -0.36
USP6NL-205ENST00000609104 SLC17A6Q9P2U8 582 aa12.82□□□□□ -0.36
USP6NL-205ENST00000609104 FKBPLQ9UIM3 349 aa12.82□□□□□ -0.36
USP6NL-205ENST00000609104 SALL4Q9UJQ4 1053 aa12.82□□□□□ -0.36
USP6NL-205ENST00000609104 OAZ3Q9UMX2 235 aa12.82□□□□□ -0.36
USP6NL-205ENST00000609104 CCNFP41002 786 aa12.82□□□□□ -0.36
USP6NL-205ENST00000609104 SLC1A2P43004 574 aa12.82□□□□□ -0.36
USP6NL-205ENST00000609104 SYT16Q17RD7 645 aa12.82□□□□□ -0.36
USP6NL-205ENST00000609104 SPPL2BQ8TCT7 592 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms