RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 A0A0U1RQJ8 604 aa12.87□□□□□ -0.35
POLR2J3-219ENST00000608621 A1L4Q6 167 aa12.87□□□□□ -0.35
POLR2J3-219ENST00000608621 HEATR9A2RTY3 570 aa12.87□□□□□ -0.35
POLR2J3-219ENST00000608621 ERI2A8K979 691 aaKnown RBP12.87□□□□□ -0.35
POLR2J3-219ENST00000608621 F8W8V4 182 aa12.87□□□□□ -0.35
POLR2J3-219ENST00000608621 KLHL41O60662 606 aa12.87□□□□□ -0.35
POLR2J3-219ENST00000608621 CBX6O95503 412 aa12.87□□□□□ -0.35
POLR2J3-219ENST00000608621 UMODP07911 640 aa12.87□□□□□ -0.35
POLR2J3-219ENST00000608621 MAGP20916 626 aa12.87□□□□□ -0.35
POLR2J3-219ENST00000608621 ADRA1DP25100 572 aa12.87□□□□□ -0.35
POLR2J3-219ENST00000608621 PKLRP30613 574 aa12.87□□□□□ -0.35
POLR2J3-219ENST00000608621 SOX8P57073 446 aa12.87□□□□□ -0.35
POLR2J3-219ENST00000608621 HSPA14Q0VDF9 509 aa12.87□□□□□ -0.35
POLR2J3-219ENST00000608621 SEMA3AQ14563 771 aa12.87□□□□□ -0.35
POLR2J3-219ENST00000608621 NR6A1Q15406 480 aa12.87□□□□□ -0.35
POLR2J3-219ENST00000608621 FASTKD1Q53R41 847 aaKnown RBP12.87□□□□□ -0.35
POLR2J3-219ENST00000608621 DNAJC21Q5F1R6 531 aaKnown RBP12.87□□□□□ -0.35
POLR2J3-219ENST00000608621 AFTPHQ6ULP2 937 aa12.87□□□□□ -0.35
POLR2J3-219ENST00000608621 IGFL3Q6UXB1 125 aa12.87□□□□□ -0.35
POLR2J3-219ENST00000608621 PPP1R21Q6ZMI0 780 aa12.87□□□□□ -0.35
POLR2J3-219ENST00000608621 TTLL10Q6ZVT0 673 aa12.87□□□□□ -0.35
POLR2J3-219ENST00000608621 ZNF534Q76KX8 674 aa12.87□□□□□ -0.35
POLR2J3-219ENST00000608621 PPP1R32Q7Z5V6 425 aa12.87□□□□□ -0.35
POLR2J3-219ENST00000608621 MCATQ8IVS2 390 aaKnown RBP12.87□□□□□ -0.35
POLR2J3-219ENST00000608621 SLC22A15Q8IZD6 547 aa12.87□□□□□ -0.35
POLR2J3-219ENST00000608621 LINC01555Q8NAE3 123 aa12.87□□□□□ -0.35
POLR2J3-219ENST00000608621 OR6P1Q8NGX9 317 aa12.87□□□□□ -0.35
POLR2J3-219ENST00000608621 ATG4AQ8WYN0 398 aa12.87□□□□□ -0.35
POLR2J3-219ENST00000608621 CARD6Q9BX69 1037 aa12.87□□□□□ -0.35
POLR2J3-219ENST00000608621 ZBTB20Q9HC78 741 aaPredicted RBP12.87□□□□□ -0.35
POLR2J3-219ENST00000608621 RIMKLBQ9ULI2 386 aa12.87□□□□□ -0.35
POLR2J3-219ENST00000608621 NOTCH2Q04721 2471 aa12.87□□□□□ -0.35
POLR2J3-219ENST00000608621 IQCF5A8MTL0 148 aa12.86□□□□□ -0.35
POLR2J3-219ENST00000608621 GPC4O75487 556 aa12.86□□□□□ -0.35
POLR2J3-219ENST00000608621 SUN1O94901 812 aa12.86□□□□□ -0.35
POLR2J3-219ENST00000608621 DDAH2O95865 285 aa12.86□□□□□ -0.35
POLR2J3-219ENST00000608621 ALPPP05187 535 aa12.86□□□□□ -0.35
POLR2J3-219ENST00000608621 CD9P21926 228 aa12.86□□□□□ -0.35
POLR2J3-219ENST00000608621 PPARGP37231 505 aaPredicted RBP12.86□□□□□ -0.35
POLR2J3-219ENST00000608621 FDFT1P37268 417 aa12.86□□□□□ -0.35
POLR2J3-219ENST00000608621 GRIA3P42263 894 aa12.86□□□□□ -0.35
POLR2J3-219ENST00000608621 GCGRP47871 477 aa12.86□□□□□ -0.35
POLR2J3-219ENST00000608621 GLRBP48167 497 aa12.86□□□□□ -0.35
POLR2J3-219ENST00000608621 RAB28P51157 221 aa12.86□□□□□ -0.35
POLR2J3-219ENST00000608621 ARSFP54793 590 aa12.86□□□□□ -0.35
POLR2J3-219ENST00000608621 ACVR1Q04771 509 aa12.86□□□□□ -0.35
POLR2J3-219ENST00000608621 KIF5AQ12840 1032 aa12.86□□□□□ -0.35
POLR2J3-219ENST00000608621 GRB7Q14451 532 aa12.86□□□□□ -0.35
POLR2J3-219ENST00000608621 CYP2A13Q16696 494 aa12.86□□□□□ -0.35
POLR2J3-219ENST00000608621 FIGLAQ6QHK4 219 aa12.86□□□□□ -0.35
POLR2J3-219ENST00000608621 PRUNE1Q86TP1 453 aa12.86□□□□□ -0.35
POLR2J3-219ENST00000608621 LDB1Q86U70 411 aaPredicted RBP12.86□□□□□ -0.35
POLR2J3-219ENST00000608621 ZADH2Q8N4Q0 377 aa12.86□□□□□ -0.35
POLR2J3-219ENST00000608621 LKAAEAR1Q8TD35 194 aa12.86□□□□□ -0.35
POLR2J3-219ENST00000608621 ASZ1Q8WWH4 475 aa12.86□□□□□ -0.35
POLR2J3-219ENST00000608621 DLG3Q92796 817 aa12.86□□□□□ -0.35
POLR2J3-219ENST00000608621 SLC22A18Q96BI1 424 aa12.86□□□□□ -0.35
POLR2J3-219ENST00000608621 HES6Q96HZ4 224 aa12.86□□□□□ -0.35
POLR2J3-219ENST00000608621 IL17FQ96PD4 163 aa12.86□□□□□ -0.35
POLR2J3-219ENST00000608621 RANBP9Q96S59 729 aa12.86□□□□□ -0.35
POLR2J3-219ENST00000608621 MENTQ9BUN1 341 aa12.86□□□□□ -0.35
POLR2J3-219ENST00000608621 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.86□□□□□ -0.35
POLR2J3-219ENST00000608621 ANAPC5Q9UJX4 755 aa12.86□□□□□ -0.35
POLR2J3-219ENST00000608621 COPG1Q9Y678 874 aaKnown RBP12.86□□□□□ -0.35
POLR2J3-219ENST00000608621 E7EVH7 732 aa12.85□□□□□ -0.35
POLR2J3-219ENST00000608621 AGPSO00116 658 aa12.85□□□□□ -0.35
POLR2J3-219ENST00000608621 IPO13O94829 963 aaKnown RBP12.85□□□□□ -0.35
POLR2J3-219ENST00000608621 IFNB1P01574 187 aa12.85□□□□□ -0.35
POLR2J3-219ENST00000608621 ETS1P14921 441 aa12.85□□□□□ -0.35
POLR2J3-219ENST00000608621 ITGAXP20702 1163 aa12.85□□□□□ -0.35
POLR2J3-219ENST00000608621 PRAMEP78395 509 aa12.85□□□□□ -0.35
POLR2J3-219ENST00000608621 SF1Q15637 639 aaKnown RBP12.85□□□□□ -0.35
POLR2J3-219ENST00000608621 OASLQ15646 514 aaKnown RBP12.85□□□□□ -0.35
POLR2J3-219ENST00000608621 CRB2Q5IJ48 1285 aa12.85□□□□□ -0.35
POLR2J3-219ENST00000608621 FCRL6Q6DN72 434 aa12.85□□□□□ -0.35
POLR2J3-219ENST00000608621 OVCH1Q7RTY7 1134 aa12.85□□□□□ -0.35
POLR2J3-219ENST00000608621 TAX1BP1Q86VP1 789 aa12.85□□□□□ -0.35
POLR2J3-219ENST00000608621 KRT222Q8N1A0 295 aa12.85□□□□□ -0.35
POLR2J3-219ENST00000608621 INPP5DQ92835 1189 aa12.85□□□□□ -0.35
POLR2J3-219ENST00000608621 BAG1Q99933 345 aaPredicted RBP12.85□□□□□ -0.35
POLR2J3-219ENST00000608621 TSSK1BQ9BXA7 367 aa12.85□□□□□ -0.35
POLR2J3-219ENST00000608621 ILKAPQ9H0C8 392 aaPredicted RBP12.85□□□□□ -0.35
POLR2J3-219ENST00000608621 ERRFI1Q9UJM3 462 aaPredicted RBP12.85□□□□□ -0.35
POLR2J3-219ENST00000608621 SLC39A10Q9ULF5 831 aa12.85□□□□□ -0.35
POLR2J3-219ENST00000608621 ZNF148Q9UQR1 794 aa12.85□□□□□ -0.35
POLR2J3-219ENST00000608621 CACNA1DQ01668 2161 aa12.84□□□□□ -0.35
POLR2J3-219ENST00000608621 UNC79Q9P2D8 2635 aa12.84□□□□□ -0.35
POLR2J3-219ENST00000608621 A0A1B0GX78 115 aa12.84□□□□□ -0.35
POLR2J3-219ENST00000608621 WIPF3A6NGB9 483 aa12.84□□□□□ -0.35
POLR2J3-219ENST00000608621 LIASO43766 372 aa12.84□□□□□ -0.35
POLR2J3-219ENST00000608621 ONECUT2O95948 504 aa12.84□□□□□ -0.35
POLR2J3-219ENST00000608621 S1PR4O95977 384 aa12.84□□□□□ -0.35
POLR2J3-219ENST00000608621 RPN2P04844 631 aa12.84□□□□□ -0.35
POLR2J3-219ENST00000608621 APOA4P06727 396 aa12.84□□□□□ -0.35
POLR2J3-219ENST00000608621 PIM1P11309 404 aaPredicted RBP12.84□□□□□ -0.35
POLR2J3-219ENST00000608621 MMP11P24347 488 aa12.84□□□□□ -0.35
POLR2J3-219ENST00000608621 MCM3P25205 808 aa12.84□□□□□ -0.35
POLR2J3-219ENST00000608621 ITGA3P26006 1051 aa12.84□□□□□ -0.35
POLR2J3-219ENST00000608621 COL8A1P27658 744 aa12.84□□□□□ -0.35
POLR2J3-219ENST00000608621 AOAHP28039 575 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms