RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 Q8NA96 180 aa7.33□□□□□ -1.24
CUX1-219ENST00000606749 PPHLN1Q8NEY8 458 aaKnown RBP7.33□□□□□ -1.24
CUX1-219ENST00000606749 OR2Y1Q8NGV0 311 aa7.33□□□□□ -1.24
CUX1-219ENST00000606749 OR2L8Q8NGY9 312 aa7.33□□□□□ -1.24
CUX1-219ENST00000606749 SLC22A18Q96BI1 424 aa7.33□□□□□ -1.24
CUX1-219ENST00000606749 PTERQ96BW5 349 aa7.33□□□□□ -1.24
CUX1-219ENST00000606749 FER1L6-AS2Q96M78 137 aa7.33□□□□□ -1.24
CUX1-219ENST00000606749 IP6K3Q96PC2 410 aa7.33□□□□□ -1.24
CUX1-219ENST00000606749 NDC1Q9BTX1 674 aa7.33□□□□□ -1.24
CUX1-219ENST00000606749 TSSK1BQ9BXA7 367 aa7.33□□□□□ -1.24
CUX1-219ENST00000606749 MFRPQ9BY79 579 aa7.33□□□□□ -1.24
CUX1-219ENST00000606749 P2RY12Q9H244 342 aa7.33□□□□□ -1.24
CUX1-219ENST00000606749 SLC22A11Q9NSA0 550 aa7.33□□□□□ -1.24
CUX1-219ENST00000606749 TREX1Q9NSU2 369 aa7.33□□□□□ -1.24
CUX1-219ENST00000606749 CATSPERZQ9NTU4 200 aa7.33□□□□□ -1.24
CUX1-219ENST00000606749 TXLNGQ9NUQ3 528 aa7.33□□□□□ -1.24
CUX1-219ENST00000606749 EURLQ9NYK6 297 aa7.33□□□□□ -1.24
CUX1-219ENST00000606749 C5AR2Q9P296 337 aa7.33□□□□□ -1.24
CUX1-219ENST00000606749 MARCH4Q9P2E8 410 aaPredicted RBP7.33□□□□□ -1.24
CUX1-219ENST00000606749 IFT80Q9P2H3 777 aaPredicted RBP7.33□□□□□ -1.24
CUX1-219ENST00000606749 NDOR1Q9UHB4 597 aa7.33□□□□□ -1.24
CUX1-219ENST00000606749 CIDEBQ9UHD4 219 aa7.33□□□□□ -1.24
CUX1-219ENST00000606749 G3BP2Q9UN86 482 aaKnown RBP7.33□□□□□ -1.24
CUX1-219ENST00000606749 SRPK3Q9UPE1 567 aa7.33□□□□□ -1.24
CUX1-219ENST00000606749 KLHL20Q9Y2M5 609 aa7.33□□□□□ -1.24
CUX1-219ENST00000606749 PTRH2Q9Y3E5 179 aaKnown RBP7.33□□□□□ -1.24
CUX1-219ENST00000606749 CCDC88CQ9P219 2028 aa7.33□□□□□ -1.24
CUX1-219ENST00000606749 DOPEY2Q9Y3R5 2298 aa7.32□□□□□ -1.24
CUX1-219ENST00000606749 NBASA2RRP1 2371 aa7.32□□□□□ -1.24
CUX1-219ENST00000606749 BLACEA4D250 179 aa7.32□□□□□ -1.24
CUX1-219ENST00000606749 MASP2O00187 686 aa7.32□□□□□ -1.24
CUX1-219ENST00000606749 PEX12O00623 359 aa7.32□□□□□ -1.24
CUX1-219ENST00000606749 PRICKLE3O43900 615 aaPredicted RBP7.32□□□□□ -1.24
CUX1-219ENST00000606749 NDUFS3O75489 264 aa7.32□□□□□ -1.24
CUX1-219ENST00000606749 C1orf105O95561 183 aa7.32□□□□□ -1.24
CUX1-219ENST00000606749 ONECUT2O95948 504 aa7.32□□□□□ -1.24
CUX1-219ENST00000606749 S1PR4O95977 384 aa7.32□□□□□ -1.24
CUX1-219ENST00000606749 IGHEP01854 428 aa7.32□□□□□ -1.24
CUX1-219ENST00000606749 RPN2P04844 631 aa7.32□□□□□ -1.24
CUX1-219ENST00000606749 UMODP07911 640 aa7.32□□□□□ -1.24
CUX1-219ENST00000606749 MAGP20916 626 aa7.32□□□□□ -1.24
CUX1-219ENST00000606749 NMBRP28336 390 aa7.32□□□□□ -1.24
CUX1-219ENST00000606749 FOLR3P41439 243 aa7.32□□□□□ -1.24
CUX1-219ENST00000606749 GCGRP47871 477 aa7.32□□□□□ -1.24
CUX1-219ENST00000606749 NPY2RP49146 381 aa7.32□□□□□ -1.24
CUX1-219ENST00000606749 ARSFP54793 590 aa7.32□□□□□ -1.24
CUX1-219ENST00000606749 SOX8P57073 446 aa7.32□□□□□ -1.24
CUX1-219ENST00000606749 SESN2P58004 480 aaPredicted RBP7.32□□□□□ -1.24
CUX1-219ENST00000606749 SLC9A5Q14940 896 aa7.32□□□□□ -1.24
CUX1-219ENST00000606749 SF1Q15637 639 aaKnown RBP7.32□□□□□ -1.24
CUX1-219ENST00000606749 PLEKHN1Q494U1 663 aaPredicted RBP7.32□□□□□ -1.24
CUX1-219ENST00000606749 AARS2Q5JTZ9 985 aaKnown RBP7.32□□□□□ -1.24
CUX1-219ENST00000606749 DCAF10Q5QP82 559 aa7.32□□□□□ -1.24
CUX1-219ENST00000606749 FHL5Q5TD97 284 aa7.32□□□□□ -1.24
CUX1-219ENST00000606749 VWA5B1Q5TIE3 1220 aa7.32□□□□□ -1.24
CUX1-219ENST00000606749 SLC6A19Q695T7 634 aa7.32□□□□□ -1.24
CUX1-219ENST00000606749 FCRL6Q6DN72 434 aa7.32□□□□□ -1.24
CUX1-219ENST00000606749 PTRHD1Q6GMV3 140 aaKnown RBP7.32□□□□□ -1.24
CUX1-219ENST00000606749 UNC5DQ6UXZ4 953 aa7.32□□□□□ -1.24
CUX1-219ENST00000606749 C4orf22Q6V702 233 aa7.32□□□□□ -1.24
CUX1-219ENST00000606749 TMEM151BQ8IW70 566 aa7.32□□□□□ -1.24
CUX1-219ENST00000606749 DCUN1D3Q8IWE4 304 aa7.32□□□□□ -1.24
CUX1-219ENST00000606749 DLG3Q92796 817 aa7.32□□□□□ -1.24
CUX1-219ENST00000606749 PNPLA2Q96AD5 504 aa7.32□□□□□ -1.24
CUX1-219ENST00000606749 ZUFSPQ96AP4 578 aa7.32□□□□□ -1.24
CUX1-219ENST00000606749 IL17FQ96PD4 163 aa7.32□□□□□ -1.24
CUX1-219ENST00000606749 KIFC1Q9BW19 673 aa7.32□□□□□ -1.24
CUX1-219ENST00000606749 IL22Q9GZX6 179 aa7.32□□□□□ -1.24
CUX1-219ENST00000606749 LRRC4CQ9HCJ2 640 aa7.32□□□□□ -1.24
CUX1-219ENST00000606749 SLAMF7Q9NQ25 335 aa7.32□□□□□ -1.24
CUX1-219ENST00000606749 EIF2B3Q9NR50 452 aaKnown RBP7.32□□□□□ -1.24
CUX1-219ENST00000606749 ENAMQ9NRM1 1142 aa7.32□□□□□ -1.24
CUX1-219ENST00000606749 IRAK4Q9NWZ3 460 aa7.32□□□□□ -1.24
CUX1-219ENST00000606749 P4HTMQ9NXG6 502 aa7.32□□□□□ -1.24
CUX1-219ENST00000606749 LUZP4Q9P127 313 aa7.32□□□□□ -1.24
CUX1-219ENST00000606749 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.32□□□□□ -1.24
CUX1-219ENST00000606749 SLC39A10Q9ULF5 831 aa7.32□□□□□ -1.24
CUX1-219ENST00000606749 TTC7AQ9ULT0 858 aaPredicted RBP7.32□□□□□ -1.24
CUX1-219ENST00000606749 ZKSCAN5Q9Y2L8 839 aa7.32□□□□□ -1.24
CUX1-219ENST00000606749 HECTD1Q9ULT8 2610 aa7.31□□□□□ -1.24
CUX1-219ENST00000606749 SPENQ96T58 3664 aaKnown RBP7.31□□□□□ -1.24
CUX1-219ENST00000606749 A0A1B0GX78 115 aa7.31□□□□□ -1.24
CUX1-219ENST00000606749 TCP11X1B4DZS4 312 aa7.31□□□□□ -1.24
CUX1-219ENST00000606749 TARM1B6A8C7 271 aa7.31□□□□□ -1.24
CUX1-219ENST00000606749 AGPSO00116 658 aa7.31□□□□□ -1.24
CUX1-219ENST00000606749 AP3B1O00203 1094 aa7.31□□□□□ -1.24
CUX1-219ENST00000606749 RASGRF2O14827 1237 aa7.31□□□□□ -1.24
CUX1-219ENST00000606749 KPNA5O15131 536 aa7.31□□□□□ -1.24
CUX1-219ENST00000606749 FKBP9O95302 570 aa7.31□□□□□ -1.24
CUX1-219ENST00000606749 ALBP02768 609 aa7.31□□□□□ -1.24
CUX1-219ENST00000606749 PIM1P11309 404 aaPredicted RBP7.31□□□□□ -1.24
CUX1-219ENST00000606749 ITGAXP20702 1163 aa7.31□□□□□ -1.24
CUX1-219ENST00000606749 RPS3P23396 243 aaKnown RBP eCLIP7.31□□□□□ -1.24
CUX1-219ENST00000606749 VARSP26640 1264 aaKnown RBP7.31□□□□□ -1.24
CUX1-219ENST00000606749 ARNTP27540 789 aa7.31□□□□□ -1.24
CUX1-219ENST00000606749 KCNJ1P48048 391 aa7.31□□□□□ -1.24
CUX1-219ENST00000606749 BASP1P80723 227 aaKnown RBP7.31□□□□□ -1.24
CUX1-219ENST00000606749 MYBPC3Q14896 1274 aa7.31□□□□□ -1.24
CUX1-219ENST00000606749 TMED2Q15363 201 aa7.31□□□□□ -1.24
CUX1-219ENST00000606749 CCSMST1Q4G0I0 132 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms