RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 ARID1BQ8NFD5 2236 aaPredicted RBP7.45□□□□□ -1.22
MSH6-211ENST00000606499 IGHV1OR21-1A0A087WYE8 117 aa7.44□□□□□ -1.22
MSH6-211ENST00000606499 LRRC14BA6NHZ5 514 aa7.44□□□□□ -1.22
MSH6-211ENST00000606499 SYCE1LA8MT33 242 aa7.44□□□□□ -1.22
MSH6-211ENST00000606499 A8MT66 165 aa7.44□□□□□ -1.22
MSH6-211ENST00000606499 H3BQF6 201 aa7.44□□□□□ -1.22
MSH6-211ENST00000606499 BTN3A3O00478 584 aa7.44□□□□□ -1.22
MSH6-211ENST00000606499 PRPF4O43172 522 aaKnown RBP eCLIP7.44□□□□□ -1.221e-7■■■■■ 27.4
MSH6-211ENST00000606499 B4GAT1O43505 415 aa7.44□□□□□ -1.22
MSH6-211ENST00000606499 KDM1AO60341 852 aa7.44□□□□□ -1.22
MSH6-211ENST00000606499 UBXN7O94888 489 aa7.44□□□□□ -1.22
MSH6-211ENST00000606499 S100BP04271 92 aaPredicted RBP7.44□□□□□ -1.22
MSH6-211ENST00000606499 PROS1P07225 676 aa7.44□□□□□ -1.22
MSH6-211ENST00000606499 ANXA5P08758 320 aa7.44□□□□□ -1.22
MSH6-211ENST00000606499 RBP1P09455 135 aa7.44□□□□□ -1.22
MSH6-211ENST00000606499 GFAPP14136 432 aa7.44□□□□□ -1.22
MSH6-211ENST00000606499 POLR2CP19387 275 aaPredicted RBP7.44□□□□□ -1.22
MSH6-211ENST00000606499 ACP1P24666 158 aa7.44□□□□□ -1.22
MSH6-211ENST00000606499 PSMB5P28074 263 aa7.44□□□□□ -1.22
MSH6-211ENST00000606499 PEBP1P30086 187 aaKnown RBP7.44□□□□□ -1.22
MSH6-211ENST00000606499 HPDP32754 393 aaPredicted RBP7.44□□□□□ -1.22
MSH6-211ENST00000606499 CSF2RBP32927 897 aa7.44□□□□□ -1.22
MSH6-211ENST00000606499 GPR3P46089 330 aa7.44□□□□□ -1.22
MSH6-211ENST00000606499 CAPZBP47756 277 aa7.44□□□□□ -1.22
MSH6-211ENST00000606499 CCT5P48643 541 aa7.44□□□□□ -1.22
MSH6-211ENST00000606499 PPM1FP49593 454 aaPredicted RBP7.44□□□□□ -1.22
MSH6-211ENST00000606499 ACADVLP49748 655 aa7.44□□□□□ -1.22
MSH6-211ENST00000606499 AGTR2P50052 363 aa7.44□□□□□ -1.22
MSH6-211ENST00000606499 DUSP3P51452 185 aaPredicted RBP7.44□□□□□ -1.22
MSH6-211ENST00000606499 PNLIPRP1P54315 467 aa7.44□□□□□ -1.22
MSH6-211ENST00000606499 TBPL1P62380 186 aa7.44□□□□□ -1.22
MSH6-211ENST00000606499 CDKL1Q00532 357 aa7.44□□□□□ -1.22
MSH6-211ENST00000606499 TSTA3Q13630 321 aaPredicted RBP7.44□□□□□ -1.22
MSH6-211ENST00000606499 PFKFB4Q16877 469 aa7.44□□□□□ -1.22
MSH6-211ENST00000606499 AMZ1Q400G9 498 aa7.44□□□□□ -1.22
MSH6-211ENST00000606499 CCDC153Q494R4 210 aa7.44□□□□□ -1.22
MSH6-211ENST00000606499 CCDC157Q569K6 752 aa7.44□□□□□ -1.22
MSH6-211ENST00000606499 ANKS6Q68DC2 871 aa7.44□□□□□ -1.22
MSH6-211ENST00000606499 AGTRAPQ6RW13 159 aa7.44□□□□□ -1.22
MSH6-211ENST00000606499 SUSD1Q6UWL2 747 aa7.44□□□□□ -1.22
MSH6-211ENST00000606499 SYTL1Q8IYJ3 562 aa7.44□□□□□ -1.22
MSH6-211ENST00000606499 ADGRF3Q8IZF5 1079 aa7.44□□□□□ -1.22
MSH6-211ENST00000606499 PTGR2Q8N8N7 351 aaPredicted RBP7.44□□□□□ -1.22
MSH6-211ENST00000606499 ANKRD42Q8N9B4 389 aa7.44□□□□□ -1.22
MSH6-211ENST00000606499 CCDC63Q8NA47 563 aa7.44□□□□□ -1.22
MSH6-211ENST00000606499 PDPRQ8NCN5 879 aa7.44□□□□□ -1.22
MSH6-211ENST00000606499 ARMC2Q8NEN0 867 aa7.44□□□□□ -1.22
MSH6-211ENST00000606499 OR6C4Q8NGE1 309 aa7.44□□□□□ -1.22
MSH6-211ENST00000606499 OR2L8Q8NGY9 312 aa7.44□□□□□ -1.22
MSH6-211ENST00000606499 NETO1Q8TDF5 533 aa7.44□□□□□ -1.22
MSH6-211ENST00000606499 TCP10LQ8TDR4 215 aa7.44□□□□□ -1.22
MSH6-211ENST00000606499 ZFPM2Q8WW38 1151 aa7.44□□□□□ -1.22
MSH6-211ENST00000606499 NAT6Q93015 286 aa7.44□□□□□ -1.22
MSH6-211ENST00000606499 ESAMQ96AP7 390 aa7.44□□□□□ -1.22
MSH6-211ENST00000606499 SH3KBP1Q96B97 665 aa7.44□□□□□ -1.22
MSH6-211ENST00000606499 ALKBH8Q96BT7 664 aaKnown RBP7.44□□□□□ -1.22
MSH6-211ENST00000606499 PYCR2Q96C36 320 aa7.44□□□□□ -1.22
MSH6-211ENST00000606499 RHBDF1Q96CC6 855 aa7.44□□□□□ -1.22
MSH6-211ENST00000606499 FBXL8Q96CD0 374 aa7.44□□□□□ -1.22
MSH6-211ENST00000606499 MED8Q96G25 268 aa7.44□□□□□ -1.22
MSH6-211ENST00000606499 CCDC138Q96M89 665 aa7.44□□□□□ -1.22
MSH6-211ENST00000606499 FAM111AQ96PZ2 611 aa7.44□□□□□ -1.22
MSH6-211ENST00000606499 CDC6Q99741 560 aa7.44□□□□□ -1.22
MSH6-211ENST00000606499 MRPL57Q9BQC6 102 aaKnown RBP7.44□□□□□ -1.22
MSH6-211ENST00000606499 SELENOSQ9BQE4 189 aa7.44□□□□□ -1.22
MSH6-211ENST00000606499 RAB11FIP5Q9BXF6 653 aa7.44□□□□□ -1.22
MSH6-211ENST00000606499 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.44□□□□□ -1.22
MSH6-211ENST00000606499 ATG10Q9H0Y0 220 aa7.44□□□□□ -1.22
MSH6-211ENST00000606499 UCK1Q9HA47 277 aa7.44□□□□□ -1.22
MSH6-211ENST00000606499 SSU72Q9NP77 194 aaKnown RBP7.44□□□□□ -1.22
MSH6-211ENST00000606499 KCNK9Q9NPC2 374 aa7.44□□□□□ -1.22
MSH6-211ENST00000606499 SPHK1Q9NYA1 384 aa7.44□□□□□ -1.22
MSH6-211ENST00000606499 PLLPQ9Y342 182 aa7.44□□□□□ -1.22
MSH6-211ENST00000606499 ASB1Q9Y576 335 aa7.44□□□□□ -1.22
MSH6-211ENST00000606499 RIF1Q5UIP0 2472 aaKnown RBP7.44□□□□□ -1.22
MSH6-211ENST00000606499 ANKRD12Q6UB98 2062 aa7.43□□□□□ -1.22
MSH6-211ENST00000606499 CABIN1Q9Y6J0 2220 aa7.43□□□□□ -1.22
MSH6-211ENST00000606499 SPAARA0A1B0GVQ0 90 aa7.43□□□□□ -1.22
MSH6-211ENST00000606499 A0A1W2PPV9 198 aa7.43□□□□□ -1.22
MSH6-211ENST00000606499 A0A1W2PQM1 296 aa7.43□□□□□ -1.22
MSH6-211ENST00000606499 TMEM120BA0PK00 339 aa7.43□□□□□ -1.22
MSH6-211ENST00000606499 CCDC189A1A4V9 331 aa7.43□□□□□ -1.22
MSH6-211ENST00000606499 PIPSLA2A3N6 862 aa7.43□□□□□ -1.22
MSH6-211ENST00000606499 GSAPA4D1B5 854 aa7.43□□□□□ -1.22
MSH6-211ENST00000606499 FAM221BA6H8Z2 402 aa7.43□□□□□ -1.22
MSH6-211ENST00000606499 OR5K3A6NET4 321 aa7.43□□□□□ -1.22
MSH6-211ENST00000606499 HMGB1P1B2RPK0 211 aaPredicted RBP7.43□□□□□ -1.22
MSH6-211ENST00000606499 E7ENX8 843 aa7.43□□□□□ -1.22
MSH6-211ENST00000606499 G3V2L1 256 aa7.43□□□□□ -1.22
MSH6-211ENST00000606499 TM4SF5O14894 197 aa7.43□□□□□ -1.22
MSH6-211ENST00000606499 GIPC1O14908 333 aa7.43□□□□□ -1.22
MSH6-211ENST00000606499 TAPBPO15533 448 aa7.43□□□□□ -1.22
MSH6-211ENST00000606499 ATP8B1O43520 1251 aa7.43□□□□□ -1.22
MSH6-211ENST00000606499 TNFSF14O43557 240 aa7.43□□□□□ -1.22
MSH6-211ENST00000606499 DUX1O43812 170 aa7.43□□□□□ -1.22
MSH6-211ENST00000606499 DLX3O60479 287 aa7.43□□□□□ -1.22
MSH6-211ENST00000606499 SMIM24O75264 130 aa7.43□□□□□ -1.22
MSH6-211ENST00000606499 SIX3O95343 332 aaPredicted RBP7.43□□□□□ -1.22
MSH6-211ENST00000606499 RPLP0P05388 317 aaKnown RBP7.43□□□□□ -1.22
MSH6-211ENST00000606499 CHRM5P08912 532 aaPredicted RBP7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms