RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 ERVH48-1M5A8F1 160 aa18.28■□□□□ 0.52
CCDC9-205ENST00000600117 CDC7O00311 574 aa18.28■□□□□ 0.52
CCDC9-205ENST00000600117 SLC16A5O15375 505 aa18.28■□□□□ 0.52
CCDC9-205ENST00000600117 MPOP05164 745 aa18.28■□□□□ 0.52
CCDC9-205ENST00000600117 CD1DP15813 335 aa18.28■□□□□ 0.52
CCDC9-205ENST00000600117 ALDH4A1P30038 563 aa18.28■□□□□ 0.52
CCDC9-205ENST00000600117 TLE3Q04726 772 aa18.28■□□□□ 0.52
CCDC9-205ENST00000600117 SP140Q13342 867 aa18.28■□□□□ 0.52
CCDC9-205ENST00000600117 ILKQ13418 452 aa18.28■□□□□ 0.52
CCDC9-205ENST00000600117 CSHL1Q14406 222 aa18.28■□□□□ 0.52
CCDC9-205ENST00000600117 PHKG1Q16816 387 aa18.28■□□□□ 0.52
CCDC9-205ENST00000600117 TAF1BQ53T94 588 aaPredicted RBP18.28■□□□□ 0.52
CCDC9-205ENST00000600117 LRIG3Q6UXM1 1119 aa18.28■□□□□ 0.52
CCDC9-205ENST00000600117 UBE2R2Q712K3 238 aaPredicted RBP18.28■□□□□ 0.52
CCDC9-205ENST00000600117 SLC12A9Q9BXP2 914 aa18.28■□□□□ 0.52
CCDC9-205ENST00000600117 UNKQ9C0B0 810 aaKnown RBP18.28■□□□□ 0.52
CCDC9-205ENST00000600117 VPS11Q9H270 941 aa18.28■□□□□ 0.52
CCDC9-205ENST00000600117 CIDEBQ9UHD4 219 aa18.28■□□□□ 0.52
CCDC9-205ENST00000600117 TLK1Q9UKI8 766 aa18.28■□□□□ 0.52
CCDC9-205ENST00000600117 PLAGL1Q9UM63 463 aa18.28■□□□□ 0.52
CCDC9-205ENST00000600117 ICKQ9UPZ9 632 aa18.28■□□□□ 0.52
CCDC9-205ENST00000600117 PDE10AQ9Y233 779 aa18.28■□□□□ 0.52
CCDC9-205ENST00000600117 TDRKHQ9Y2W6 561 aaKnown RBP18.28■□□□□ 0.52
CCDC9-205ENST00000600117 COL27A1Q8IZC6 1860 aaPredicted RBP18.27■□□□□ 0.52
CCDC9-205ENST00000600117 UQCRHLA0A096LP55 91 aa18.27■□□□□ 0.52
CCDC9-205ENST00000600117 A0A1W2PPM1 405 aa18.27■□□□□ 0.52
CCDC9-205ENST00000600117 A0A1W2PQM1 296 aa18.27■□□□□ 0.52
CCDC9-205ENST00000600117 MYO1CO00159 1063 aa18.27■□□□□ 0.52
CCDC9-205ENST00000600117 BTN3A1O00481 513 aa18.27■□□□□ 0.52
CCDC9-205ENST00000600117 ZBTB14O43829 449 aa18.27■□□□□ 0.52
CCDC9-205ENST00000600117 UQCRHP07919 91 aa18.27■□□□□ 0.52
CCDC9-205ENST00000600117 LTA4HP09960 611 aaKnown RBP18.27■□□□□ 0.52
CCDC9-205ENST00000600117 CD1CP29017 333 aa18.27■□□□□ 0.52
CCDC9-205ENST00000600117 ATP6V0D1P61421 351 aa18.27■□□□□ 0.52
CCDC9-205ENST00000600117 CCL7P80098 99 aa18.27■□□□□ 0.52
CCDC9-205ENST00000600117 CASP8Q14790 479 aa18.27■□□□□ 0.52
CCDC9-205ENST00000600117 TSNQ15631 228 aaKnown RBP18.27■□□□□ 0.52
CCDC9-205ENST00000600117 PPP1R3AQ16821 1122 aa18.27■□□□□ 0.52
CCDC9-205ENST00000600117 HES3Q5TGS1 186 aa18.27■□□□□ 0.52
CCDC9-205ENST00000600117 SBSNQ6UWP8 590 aa18.27■□□□□ 0.52
CCDC9-205ENST00000600117 SH2D5Q6ZV89 423 aa18.27■□□□□ 0.52
CCDC9-205ENST00000600117 CLEC14AQ86T13 490 aa18.27■□□□□ 0.52
CCDC9-205ENST00000600117 TBC1D1Q86TI0 1168 aaPredicted RBP18.27■□□□□ 0.52
CCDC9-205ENST00000600117 PLD6Q8N2A8 252 aaKnown RBP18.27■□□□□ 0.52
CCDC9-205ENST00000600117 DENND1AQ8TEH3 1009 aa18.27■□□□□ 0.52
CCDC9-205ENST00000600117 RAD51AP1Q96B01 352 aa18.27■□□□□ 0.52
CCDC9-205ENST00000600117 PTERQ96BW5 349 aa18.27■□□□□ 0.52
CCDC9-205ENST00000600117 NXNL1Q96CM4 212 aa18.27■□□□□ 0.52
CCDC9-205ENST00000600117 WBP1Q96G27 269 aa18.27■□□□□ 0.52
CCDC9-205ENST00000600117 GPR78Q96P69 363 aa18.27■□□□□ 0.52
CCDC9-205ENST00000600117 TWSG1Q9GZX9 223 aa18.27■□□□□ 0.52
CCDC9-205ENST00000600117 LRRN3Q9H3W5 708 aa18.27■□□□□ 0.52
CCDC9-205ENST00000600117 XKR8Q9H6D3 395 aa18.27■□□□□ 0.52
CCDC9-205ENST00000600117 PARVBQ9HBI1 364 aa18.27■□□□□ 0.52
CCDC9-205ENST00000600117 NOVA2Q9UNW9 492 aaKnown RBP18.27■□□□□ 0.52
CCDC9-205ENST00000600117 BOD1L1Q8NFC6 3051 aa18.27■□□□□ 0.52
CCDC9-205ENST00000600117 UBR5O95071 2799 aaPredicted RBP18.27■□□□□ 0.51
CCDC9-205ENST00000600117 NTN3O00634 580 aaPredicted RBP18.26■□□□□ 0.51
CCDC9-205ENST00000600117 OPA1O60313 960 aa18.26■□□□□ 0.51
CCDC9-205ENST00000600117 KLHL2O95198 593 aa18.26■□□□□ 0.51
CCDC9-205ENST00000600117 RPLP0P05388 317 aaKnown RBP18.26■□□□□ 0.51
CCDC9-205ENST00000600117 PKLRP30613 574 aa18.26■□□□□ 0.51
CCDC9-205ENST00000600117 CXADRP78310 365 aa18.26■□□□□ 0.51
CCDC9-205ENST00000600117 GPLD1P80108 840 aa18.26■□□□□ 0.51
CCDC9-205ENST00000600117 SQSTM1Q13501 440 aa18.26■□□□□ 0.51
CCDC9-205ENST00000600117 PLCL1Q15111 1095 aa18.26■□□□□ 0.51
CCDC9-205ENST00000600117 KRT71Q3SY84 523 aa18.26■□□□□ 0.51
CCDC9-205ENST00000600117 NKAIN2Q5VXU1 208 aa18.26■□□□□ 0.51
CCDC9-205ENST00000600117 TTC23LQ6PF05 361 aa18.26■□□□□ 0.51
CCDC9-205ENST00000600117 OR4E2Q8NGC2 313 aa18.26■□□□□ 0.51
CCDC9-205ENST00000600117 OR9A1PQ8NGU1 263 aa18.26■□□□□ 0.51
CCDC9-205ENST00000600117 MAGEC3Q8TD91 643 aa18.26■□□□□ 0.51
CCDC9-205ENST00000600117 ACMSDQ8TDX5 336 aa18.26■□□□□ 0.51
CCDC9-205ENST00000600117 LCN9Q8WX39 176 aa18.26■□□□□ 0.51
CCDC9-205ENST00000600117 RSC1A1Q92681 617 aa18.26■□□□□ 0.51
CCDC9-205ENST00000600117 CABS1Q96KC9 395 aa18.26■□□□□ 0.51
CCDC9-205ENST00000600117 IL17FQ96PD4 163 aa18.26■□□□□ 0.51
CCDC9-205ENST00000600117 PKP4Q99569 1192 aa18.26■□□□□ 0.51
CCDC9-205ENST00000600117 CLMPQ9H6B4 373 aa18.26■□□□□ 0.51
CCDC9-205ENST00000600117 BRINP1O60477 761 aa18.25■□□□□ 0.51
CCDC9-205ENST00000600117 UBXN7O94888 489 aa18.25■□□□□ 0.51
CCDC9-205ENST00000600117 MT-ND3P03897 115 aa18.25■□□□□ 0.51
CCDC9-205ENST00000600117 ERGP11308 486 aa18.25■□□□□ 0.51
CCDC9-205ENST00000600117 COL6A2P12110 1019 aa18.25■□□□□ 0.51
CCDC9-205ENST00000600117 TYRP1P17643 537 aa18.25■□□□□ 0.51
CCDC9-205ENST00000600117 KRT15P19012 456 aa18.25■□□□□ 0.51
CCDC9-205ENST00000600117 TFEBP19484 476 aa18.25■□□□□ 0.51
CCDC9-205ENST00000600117 CYP2A7P20853 494 aa18.25■□□□□ 0.51
CCDC9-205ENST00000600117 CSF2RBP32927 897 aa18.25■□□□□ 0.51
CCDC9-205ENST00000600117 E2F1Q01094 437 aa18.25■□□□□ 0.51
CCDC9-205ENST00000600117 OR4D1Q15615 310 aa18.25■□□□□ 0.51
CCDC9-205ENST00000600117 AMZ1Q400G9 498 aa18.25■□□□□ 0.51
CCDC9-205ENST00000600117 ADAMTSL2Q86TH1 951 aa18.25■□□□□ 0.51
CCDC9-205ENST00000600117 ISCA2Q86U28 154 aa18.25■□□□□ 0.51
CCDC9-205ENST00000600117 AMIGO1Q86WK6 493 aa18.25■□□□□ 0.51
CCDC9-205ENST00000600117 SPACA3Q8IXA5 215 aa18.25■□□□□ 0.51
CCDC9-205ENST00000600117 LMNTD1Q8N9Z9 388 aa18.25■□□□□ 0.51
CCDC9-205ENST00000600117 OR10G6Q8NH81 332 aa18.25■□□□□ 0.51
CCDC9-205ENST00000600117 MCOLN3Q8TDD5 553 aa18.25■□□□□ 0.51
CCDC9-205ENST00000600117 KIAA1191Q96A73 305 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms