RNA–Protein interactions for RNA: ENST00000599538.5

VRK3-217, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 2,126 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-217ENST00000599538 DFNA5O60443 496 aa14.08□□□□□ -0.16
VRK3-217ENST00000599538 SLC16A8O95907 504 aa14.08□□□□□ -0.16
VRK3-217ENST00000599538 KRT6AP02538 564 aa14.08□□□□□ -0.16
VRK3-217ENST00000599538 KRT6BP04259 564 aa14.08□□□□□ -0.16
VRK3-217ENST00000599538 EPHX1P07099 455 aa14.08□□□□□ -0.16
VRK3-217ENST00000599538 LYNP07948 512 aa14.08□□□□□ -0.16
VRK3-217ENST00000599538 MAGEA10P43363 369 aaPredicted RBP14.08□□□□□ -0.16
VRK3-217ENST00000599538 KRT6CP48668 564 aa14.08□□□□□ -0.16
VRK3-217ENST00000599538 OR4D2P58180 307 aa14.08□□□□□ -0.16
VRK3-217ENST00000599538 PHC1P78364 1004 aa14.08□□□□□ -0.16
VRK3-217ENST00000599538 MRPS35P82673 323 aaKnown RBP14.08□□□□□ -0.16
VRK3-217ENST00000599538 EIF4HQ15056 248 aaKnown RBP14.08□□□□□ -0.16
VRK3-217ENST00000599538 EGFLAMQ63HQ2 1017 aa14.08□□□□□ -0.16
VRK3-217ENST00000599538 ADNP2Q6IQ32 1131 aa14.08□□□□□ -0.16
VRK3-217ENST00000599538 ISLR2Q6UXK2 745 aa14.08□□□□□ -0.16
VRK3-217ENST00000599538 GPR149Q86SP6 731 aa14.08□□□□□ -0.16
VRK3-217ENST00000599538 KIAA1958Q8N8K9 716 aa14.08□□□□□ -0.16
VRK3-217ENST00000599538 ADCY4Q8NFM4 1077 aa14.08□□□□□ -0.16
VRK3-217ENST00000599538 ZUFSPQ96AP4 578 aa14.08□□□□□ -0.16
VRK3-217ENST00000599538 APIPQ96GX9 242 aa14.08□□□□□ -0.16
VRK3-217ENST00000599538 RPP25Q9BUL9 199 aaKnown RBP14.08□□□□□ -0.16
VRK3-217ENST00000599538 ELOVL6Q9H5J4 265 aa14.08□□□□□ -0.16
VRK3-217ENST00000599538 PRSS16Q9NQE7 514 aa14.08□□□□□ -0.16
VRK3-217ENST00000599538 GDE1Q9NZC3 331 aa14.08□□□□□ -0.16
VRK3-217ENST00000599538 ACTR3BQ9P1U1 418 aa14.08□□□□□ -0.16
VRK3-217ENST00000599538 STOX2Q9P2F5 926 aaPredicted RBP14.08□□□□□ -0.16
VRK3-217ENST00000599538 AURKCQ9UQB9 309 aa14.08□□□□□ -0.16
VRK3-217ENST00000599538 PABPN1LA6NDY0 278 aaKnown RBP14.07□□□□□ -0.16
VRK3-217ENST00000599538 E7EQ34 232 aa14.07□□□□□ -0.16
VRK3-217ENST00000599538 ZNF26P17031 533 aaPredicted RBP14.07□□□□□ -0.16
VRK3-217ENST00000599538 P2RY2P41231 377 aa14.07□□□□□ -0.16
VRK3-217ENST00000599538 NAE1Q13564 534 aa14.07□□□□□ -0.16
VRK3-217ENST00000599538 RUNX3Q13761 415 aa14.07□□□□□ -0.16
VRK3-217ENST00000599538 GGTA1PQ4G0N0 100 aa14.07□□□□□ -0.16
VRK3-217ENST00000599538 LCN8Q6JVE9 175 aa14.07□□□□□ -0.16
VRK3-217ENST00000599538 AGTRAPQ6RW13 159 aa14.07□□□□□ -0.16
VRK3-217ENST00000599538 CYP2U1Q7Z449 544 aa14.07□□□□□ -0.16
VRK3-217ENST00000599538 THOC6Q86W42 341 aaKnown RBP14.07□□□□□ -0.16
VRK3-217ENST00000599538 TMEM126BQ8IUX1 230 aa14.07□□□□□ -0.16
VRK3-217ENST00000599538 HID1Q8IV36 788 aa14.07□□□□□ -0.16
VRK3-217ENST00000599538 ZNF547Q8IVP9 402 aa14.07□□□□□ -0.16
VRK3-217ENST00000599538 PLA2G15Q8NCC3 412 aa14.07□□□□□ -0.16
VRK3-217ENST00000599538 GTF2H4Q92759 462 aa14.07□□□□□ -0.16
VRK3-217ENST00000599538 GLMNQ92990 594 aa14.07□□□□□ -0.16
VRK3-217ENST00000599538 MED8Q96G25 268 aa14.07□□□□□ -0.16
VRK3-217ENST00000599538 EGLN2Q96KS0 407 aa14.07□□□□□ -0.16
VRK3-217ENST00000599538 PKP4Q99569 1192 aa14.07□□□□□ -0.16
VRK3-217ENST00000599538 CGREF1Q99674 301 aa14.07□□□□□ -0.16
VRK3-217ENST00000599538 KCTD14Q9BQ13 255 aaPredicted RBP14.07□□□□□ -0.16
VRK3-217ENST00000599538 KXD1Q9BQD3 176 aa14.07□□□□□ -0.16
VRK3-217ENST00000599538 DPY30Q9C005 99 aa14.07□□□□□ -0.16
VRK3-217ENST00000599538 TRPV4Q9HBA0 871 aa14.07□□□□□ -0.16
VRK3-217ENST00000599538 SLC6A13Q9NSD5 602 aa14.07□□□□□ -0.16
VRK3-217ENST00000599538 ATXN10Q9UBB4 475 aa14.07□□□□□ -0.16
VRK3-217ENST00000599538 PRKAB1Q9Y478 270 aa14.07□□□□□ -0.16
VRK3-217ENST00000599538 CLGNO14967 610 aa14.06□□□□□ -0.16
VRK3-217ENST00000599538 LZTS3O60299 673 aaPredicted RBP14.06□□□□□ -0.16
VRK3-217ENST00000599538 TPST1O60507 370 aa14.06□□□□□ -0.16
VRK3-217ENST00000599538 HRH2P25021 359 aa14.06□□□□□ -0.16
VRK3-217ENST00000599538 MAP4P27816 1152 aaKnown RBP14.06□□□□□ -0.16
VRK3-217ENST00000599538 IMPA1P29218 277 aa14.06□□□□□ -0.16
VRK3-217ENST00000599538 GPR1P46091 355 aa14.06□□□□□ -0.16
VRK3-217ENST00000599538 BNIP2Q12982 314 aa14.06□□□□□ -0.16
VRK3-217ENST00000599538 MED21Q13503 144 aa14.06□□□□□ -0.16
VRK3-217ENST00000599538 GK3PQ14409 553 aa14.06□□□□□ -0.16
VRK3-217ENST00000599538 SF1Q15637 639 aaKnown RBP14.06□□□□□ -0.16
VRK3-217ENST00000599538 NRF1Q16656 503 aa14.06□□□□□ -0.16
VRK3-217ENST00000599538 TTC23LQ6PF05 361 aa14.06□□□□□ -0.16
VRK3-217ENST00000599538 DNAJC14Q6Y2X3 702 aaPredicted RBP14.06□□□□□ -0.16
VRK3-217ENST00000599538 ERN2Q76MJ5 926 aaKnown RBP14.06□□□□□ -0.16
VRK3-217ENST00000599538 TRAPPC5Q8IUR0 188 aa14.06□□□□□ -0.16
VRK3-217ENST00000599538 CFAP206Q8IYR0 622 aa14.06□□□□□ -0.16
VRK3-217ENST00000599538 PHC3Q8NDX5 983 aa14.06□□□□□ -0.16
VRK3-217ENST00000599538 SLC13A3Q8WWT9 602 aa14.06□□□□□ -0.16
VRK3-217ENST00000599538 TSSK3Q96PN8 268 aa14.06□□□□□ -0.16
VRK3-217ENST00000599538 NR1H4Q96RI1 486 aaPredicted RBP14.06□□□□□ -0.16
VRK3-217ENST00000599538 MYADMQ96S97 322 aa14.06□□□□□ -0.16
VRK3-217ENST00000599538 UHRF1Q96T88 793 aaPredicted RBP14.06□□□□□ -0.16
VRK3-217ENST00000599538 SLC29A1Q99808 456 aa14.06□□□□□ -0.16
VRK3-217ENST00000599538 IKZF5Q9H5V7 419 aa14.06□□□□□ -0.16
VRK3-217ENST00000599538 COQ10BQ9H8M1 238 aa14.06□□□□□ -0.16
VRK3-217ENST00000599538 TMEM45AQ9NWC5 275 aa14.06□□□□□ -0.16
VRK3-217ENST00000599538 SNX6Q9UNH7 406 aa14.06□□□□□ -0.16
VRK3-217ENST00000599538 NUP214P35658 2090 aaPredicted RBP14.06□□□□□ -0.16
VRK3-217ENST00000599538 FAM149AA5PLN7 773 aa14.06□□□□□ -0.16
VRK3-217ENST00000599538 MAGEA13PA6NCF6 341 aa14.06□□□□□ -0.16
VRK3-217ENST00000599538 IFRD1O00458 451 aaPredicted RBP14.06□□□□□ -0.16
VRK3-217ENST00000599538 CKMT2P17540 419 aa14.06□□□□□ -0.16
VRK3-217ENST00000599538 FCHO2Q0JRZ9 810 aa14.06□□□□□ -0.16
VRK3-217ENST00000599538 ELP6Q0PNE2 266 aa14.06□□□□□ -0.16
VRK3-217ENST00000599538 CNTN1Q12860 1018 aa14.06□□□□□ -0.16
VRK3-217ENST00000599538 PDGFRLQ15198 375 aa14.06□□□□□ -0.16
VRK3-217ENST00000599538 GTDC1Q4AE62 458 aa14.06□□□□□ -0.16
VRK3-217ENST00000599538 CACHD1Q5VU97 1274 aa14.06□□□□□ -0.16
VRK3-217ENST00000599538 FRG2Q64ET8 278 aa14.06□□□□□ -0.16
VRK3-217ENST00000599538 PPP2R2DQ66LE6 453 aa14.06□□□□□ -0.16
VRK3-217ENST00000599538 PTRH1Q86Y79 214 aaKnown RBP14.06□□□□□ -0.16
VRK3-217ENST00000599538 MSRB3Q8IXL7 192 aa14.06□□□□□ -0.16
VRK3-217ENST00000599538 ADGRG5Q8IZF4 528 aa14.06□□□□□ -0.16
VRK3-217ENST00000599538 SUSD6Q92537 303 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms