RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 INTS7Q9NVH2 962 aaKnown RBP16.58■□□□□ 0.25
SHKBP1-216ENST00000598201 SLAMF8Q9P0V8 285 aa16.58■□□□□ 0.25
SHKBP1-216ENST00000598201 SERGEFQ9UGK8 458 aa16.58■□□□□ 0.25
SHKBP1-216ENST00000598201 IGLON5A6NGN9 336 aa16.58■□□□□ 0.24
SHKBP1-216ENST00000598201 KIF1CO43896 1103 aaKnown RBP16.58■□□□□ 0.24
SHKBP1-216ENST00000598201 DNAJA2O60884 412 aa16.58■□□□□ 0.24
SHKBP1-216ENST00000598201 ZNF8P17098 575 aaPredicted RBP16.58■□□□□ 0.24
SHKBP1-216ENST00000598201 SLC6A2P23975 617 aa16.58■□□□□ 0.24
SHKBP1-216ENST00000598201 SEC13P55735 322 aa16.58■□□□□ 0.24
SHKBP1-216ENST00000598201 CST6Q15828 149 aa16.58■□□□□ 0.24
SHKBP1-216ENST00000598201 GGTA1PQ4G0N0 100 aa16.58■□□□□ 0.24
SHKBP1-216ENST00000598201 SAMD4BQ5PRF9 694 aaKnown RBP16.58■□□□□ 0.24
SHKBP1-216ENST00000598201 AGBL4Q5VU57 503 aa16.58■□□□□ 0.24
SHKBP1-216ENST00000598201 FAM46CQ5VWP2 391 aa16.58■□□□□ 0.24
SHKBP1-216ENST00000598201 ZNF513Q8N8E2 541 aaPredicted RBP16.58■□□□□ 0.24
SHKBP1-216ENST00000598201 L3MBTL4Q8NA19 623 aa16.58■□□□□ 0.24
SHKBP1-216ENST00000598201 NAF1Q96HR8 494 aaKnown RBP16.58■□□□□ 0.24
SHKBP1-216ENST00000598201 HOPXQ9BPY8 73 aaPredicted RBP16.58■□□□□ 0.24
SHKBP1-216ENST00000598201 RSPH9Q9H1X1 276 aaPredicted RBP16.58■□□□□ 0.24
SHKBP1-216ENST00000598201 CMTM6Q9NX76 183 aa16.58■□□□□ 0.24
SHKBP1-216ENST00000598201 STOX2Q9P2F5 926 aaPredicted RBP16.58■□□□□ 0.24
SHKBP1-216ENST00000598201 ABCD2Q9UBJ2 740 aa16.58■□□□□ 0.24
SHKBP1-216ENST00000598201 TMEM98Q9Y2Y6 226 aa16.58■□□□□ 0.24
SHKBP1-216ENST00000598201 C19orf67A6NJJ6 358 aa16.57■□□□□ 0.24
SHKBP1-216ENST00000598201 H3BM21 787 aa16.57■□□□□ 0.24
SHKBP1-216ENST00000598201 K7EQS6 105 aa16.57■□□□□ 0.24
SHKBP1-216ENST00000598201 KRT6AP02538 564 aa16.57■□□□□ 0.24
SHKBP1-216ENST00000598201 KRT6BP04259 564 aa16.57■□□□□ 0.24
SHKBP1-216ENST00000598201 GNPDA1P46926 289 aa16.57■□□□□ 0.24
SHKBP1-216ENST00000598201 KRT6CP48668 564 aa16.57■□□□□ 0.24
SHKBP1-216ENST00000598201 PRKG2Q13237 762 aa16.57■□□□□ 0.24
SHKBP1-216ENST00000598201 CAMK2GQ13555 558 aaPredicted RBP16.57■□□□□ 0.24
SHKBP1-216ENST00000598201 NFYCQ13952 458 aa16.57■□□□□ 0.24
SHKBP1-216ENST00000598201 PTGR1Q14914 329 aa16.57■□□□□ 0.24
SHKBP1-216ENST00000598201 IMPG1Q17R60 797 aa16.57■□□□□ 0.24
SHKBP1-216ENST00000598201 CRTC3Q6UUV7 619 aa16.57■□□□□ 0.24
SHKBP1-216ENST00000598201 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.57■□□□□ 0.24
SHKBP1-216ENST00000598201 PPFIBP2Q8ND30 876 aa16.57■□□□□ 0.24
SHKBP1-216ENST00000598201 PKP4Q99569 1192 aa16.57■□□□□ 0.24
SHKBP1-216ENST00000598201 ZCCHC2Q9C0B9 1178 aaKnown RBP16.57■□□□□ 0.24
SHKBP1-216ENST00000598201 LRTM1Q9HBL6 345 aa16.57■□□□□ 0.24
SHKBP1-216ENST00000598201 MRPL40Q9NQ50 206 aaKnown RBP16.57■□□□□ 0.24
SHKBP1-216ENST00000598201 GID8Q9NWU2 228 aa16.57■□□□□ 0.24
SHKBP1-216ENST00000598201 SEC22BO75396 215 aa16.57■□□□□ 0.24
SHKBP1-216ENST00000598201 SLC16A8O95907 504 aa16.57■□□□□ 0.24
SHKBP1-216ENST00000598201 CATP04040 527 aaKnown RBP16.57■□□□□ 0.24
SHKBP1-216ENST00000598201 ASGR2P07307 311 aa16.57■□□□□ 0.24
SHKBP1-216ENST00000598201 TIE1P35590 1138 aa16.57■□□□□ 0.24
SHKBP1-216ENST00000598201 KIR2DL1P43626 348 aaPredicted RBP16.57■□□□□ 0.24
SHKBP1-216ENST00000598201 CHIT1Q13231 466 aa16.57■□□□□ 0.24
SHKBP1-216ENST00000598201 NAE1Q13564 534 aa16.57■□□□□ 0.24
SHKBP1-216ENST00000598201 LPCAT4Q643R3 524 aa16.57■□□□□ 0.24
SHKBP1-216ENST00000598201 SLC2A7Q6PXP3 512 aa16.57■□□□□ 0.24
SHKBP1-216ENST00000598201 AGTRAPQ6RW13 159 aa16.57■□□□□ 0.24
SHKBP1-216ENST00000598201 THOC6Q86W42 341 aaKnown RBP16.57■□□□□ 0.24
SHKBP1-216ENST00000598201 SPATA24Q86W54 205 aa16.57■□□□□ 0.24
SHKBP1-216ENST00000598201 SELENOMQ8WWX9 145 aa16.57■□□□□ 0.24
SHKBP1-216ENST00000598201 CCDC138Q96M89 665 aa16.57■□□□□ 0.24
SHKBP1-216ENST00000598201 TMEM45AQ9NWC5 275 aa16.57■□□□□ 0.24
SHKBP1-216ENST00000598201 LEF1Q9UJU2 399 aaPredicted RBP16.57■□□□□ 0.24
SHKBP1-216ENST00000598201 PRKAB1Q9Y478 270 aa16.57■□□□□ 0.24
SHKBP1-216ENST00000598201 VCANP13611 3396 aa16.56■□□□□ 0.24
SHKBP1-216ENST00000598201 ATG2BQ96BY7 2078 aa16.56■□□□□ 0.24
SHKBP1-216ENST00000598201 POP7O75817 140 aaKnown RBP16.56■□□□□ 0.24
SHKBP1-216ENST00000598201 CD22P20273 847 aa16.56■□□□□ 0.24
SHKBP1-216ENST00000598201 ATP6V1C1P21283 382 aa16.56■□□□□ 0.24
SHKBP1-216ENST00000598201 IMPA1P29218 277 aa16.56■□□□□ 0.24
SHKBP1-216ENST00000598201 CASP2P42575 452 aa16.56■□□□□ 0.24
SHKBP1-216ENST00000598201 DGKQP52824 942 aa16.56■□□□□ 0.24
SHKBP1-216ENST00000598201 KIAA0040Q15053 153 aa16.56■□□□□ 0.24
SHKBP1-216ENST00000598201 LRRC36Q1X8D7 754 aa16.56■□□□□ 0.24
SHKBP1-216ENST00000598201 SUSD1Q6UWL2 747 aa16.56■□□□□ 0.24
SHKBP1-216ENST00000598201 SLC44A3Q8N4M1 653 aa16.56■□□□□ 0.24
SHKBP1-216ENST00000598201 HIC2Q96JB3 615 aa16.56■□□□□ 0.24
SHKBP1-216ENST00000598201 OR4K3Q96R72 315 aa16.56■□□□□ 0.24
SHKBP1-216ENST00000598201 BCAP29Q9UHQ4 241 aa16.56■□□□□ 0.24
SHKBP1-216ENST00000598201 PSMD13Q9UNM6 376 aa16.56■□□□□ 0.24
SHKBP1-216ENST00000598201 PCDHA9Q9Y5H5 950 aa16.56■□□□□ 0.24
SHKBP1-216ENST00000598201 LIN7AO14910 233 aaPredicted RBP16.55■□□□□ 0.24
SHKBP1-216ENST00000598201 C1orf105O95561 183 aa16.55■□□□□ 0.24
SHKBP1-216ENST00000598201 PCCBP05166 539 aa16.55■□□□□ 0.24
SHKBP1-216ENST00000598201 JAK1P23458 1154 aa16.55■□□□□ 0.24
SHKBP1-216ENST00000598201 HALP42357 657 aa16.55■□□□□ 0.24
SHKBP1-216ENST00000598201 SMU1Q2TAY7 513 aa16.55■□□□□ 0.24
SHKBP1-216ENST00000598201 WSCD2Q2TBF2 565 aa16.55■□□□□ 0.24
SHKBP1-216ENST00000598201 RABL3Q5HYI8 236 aa16.55■□□□□ 0.24
SHKBP1-216ENST00000598201 TJAP1Q5JTD0 557 aa16.55■□□□□ 0.24
SHKBP1-216ENST00000598201 KIAA1211LQ6NV74 962 aa16.55■□□□□ 0.24
SHKBP1-216ENST00000598201 PRMT9Q6P2P2 845 aa16.55■□□□□ 0.24
SHKBP1-216ENST00000598201 NUDT18Q6ZVK8 323 aa16.55■□□□□ 0.24
SHKBP1-216ENST00000598201 C11orf96Q7Z7L8 435 aa16.55■□□□□ 0.24
SHKBP1-216ENST00000598201 KIAA2013Q8IYS2 634 aa16.55■□□□□ 0.24
SHKBP1-216ENST00000598201 LIX1Q8N485 282 aa16.55■□□□□ 0.24
SHKBP1-216ENST00000598201 RNF175Q8N4F7 328 aa16.55■□□□□ 0.24
SHKBP1-216ENST00000598201 DNAJB14Q8TBM8 379 aa16.55■□□□□ 0.24
SHKBP1-216ENST00000598201 MED8Q96G25 268 aa16.55■□□□□ 0.24
SHKBP1-216ENST00000598201 COX14Q96I36 57 aa16.55■□□□□ 0.24
SHKBP1-216ENST00000598201 LGR4Q9BXB1 951 aa16.55■□□□□ 0.24
SHKBP1-216ENST00000598201 ELOVL6Q9H5J4 265 aa16.55■□□□□ 0.24
SHKBP1-216ENST00000598201 C1orf109Q9NX04 203 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms