RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 CDC23Q9UJX2 597 aa10.16□□□□□ -0.78
CHMP2A-202ENST00000596708 KLHL20Q9Y2M5 609 aa10.16□□□□□ -0.78
CHMP2A-202ENST00000596708 DUSP10Q9Y6W6 482 aa10.16□□□□□ -0.78
CHMP2A-202ENST00000596708 SCN3AQ9NY46 2000 aa10.16□□□□□ -0.78
CHMP2A-202ENST00000596708 CCDC162PA2VCL2 907 aa10.15□□□□□ -0.78
CHMP2A-202ENST00000596708 BHMG1C9JSJ3 638 aaPredicted RBP10.15□□□□□ -0.78
CHMP2A-202ENST00000596708 OR1I1O60431 355 aa10.15□□□□□ -0.78
CHMP2A-202ENST00000596708 ALOX12BO75342 701 aa10.15□□□□□ -0.78
CHMP2A-202ENST00000596708 IPO7O95373 1038 aaKnown RBP10.15□□□□□ -0.78
CHMP2A-202ENST00000596708 GAS8O95995 478 aa10.15□□□□□ -0.78
CHMP2A-202ENST00000596708 GOT2P00505 430 aaKnown RBP10.15□□□□□ -0.78
CHMP2A-202ENST00000596708 PEBP1P30086 187 aaKnown RBP10.15□□□□□ -0.78
CHMP2A-202ENST00000596708 FOXN2P32314 431 aa10.15□□□□□ -0.78
CHMP2A-202ENST00000596708 RAB28P51157 221 aa10.15□□□□□ -0.78
CHMP2A-202ENST00000596708 SOX8P57073 446 aa10.15□□□□□ -0.78
CHMP2A-202ENST00000596708 HIF1AQ16665 826 aa10.15□□□□□ -0.78
CHMP2A-202ENST00000596708 PACS1Q6VY07 963 aa10.15□□□□□ -0.78
CHMP2A-202ENST00000596708 LINC00523Q86TU6 105 aa10.15□□□□□ -0.78
CHMP2A-202ENST00000596708 CUZD1Q86UP6 607 aa10.15□□□□□ -0.78
CHMP2A-202ENST00000596708 TAX1BP1Q86VP1 789 aa10.15□□□□□ -0.78
CHMP2A-202ENST00000596708 MCATQ8IVS2 390 aaKnown RBP10.15□□□□□ -0.78
CHMP2A-202ENST00000596708 PARP9Q8IXQ6 854 aa10.15□□□□□ -0.78
CHMP2A-202ENST00000596708 LMNTD1Q8N9Z9 388 aa10.15□□□□□ -0.78
CHMP2A-202ENST00000596708 TTC29Q8NA56 475 aaPredicted RBP10.15□□□□□ -0.78
CHMP2A-202ENST00000596708 OR52K1Q8NGK4 314 aa10.15□□□□□ -0.78
CHMP2A-202ENST00000596708 DNAJB14Q8TBM8 379 aa10.15□□□□□ -0.78
CHMP2A-202ENST00000596708 SLC22A18Q96BI1 424 aa10.15□□□□□ -0.78
CHMP2A-202ENST00000596708 WDR77Q9BQA1 342 aaPredicted RBP10.15□□□□□ -0.78
CHMP2A-202ENST00000596708 SLC6A20Q9NP91 592 aa10.15□□□□□ -0.78
CHMP2A-202ENST00000596708 SLC22A11Q9NSA0 550 aa10.15□□□□□ -0.78
CHMP2A-202ENST00000596708 CIDEBQ9UHD4 219 aa10.15□□□□□ -0.78
CHMP2A-202ENST00000596708 FBXL4Q9UKA2 621 aa10.15□□□□□ -0.78
CHMP2A-202ENST00000596708 AMFRQ9UKV5 643 aa10.15□□□□□ -0.78
CHMP2A-202ENST00000596708 NTNG1Q9Y2I2 539 aa10.15□□□□□ -0.78
CHMP2A-202ENST00000596708 PCDHGA10Q9Y5H3 936 aa10.15□□□□□ -0.78
CHMP2A-202ENST00000596708 EPN1Q9Y6I3 576 aaPredicted RBP10.15□□□□□ -0.78
CHMP2A-202ENST00000596708 A0A1B0GX78 115 aa10.14□□□□□ -0.79
CHMP2A-202ENST00000596708 RCCD1A6NED2 376 aa10.14□□□□□ -0.79
CHMP2A-202ENST00000596708 MROH6A6NGR9 719 aa10.14□□□□□ -0.79
CHMP2A-202ENST00000596708 SOWAHDA6NJG2 315 aa10.14□□□□□ -0.79
CHMP2A-202ENST00000596708 ALBP02768 609 aa10.14□□□□□ -0.79
CHMP2A-202ENST00000596708 RPN2P04844 631 aa10.14□□□□□ -0.79
CHMP2A-202ENST00000596708 CD9P21926 228 aa10.14□□□□□ -0.79
CHMP2A-202ENST00000596708 MMP11P24347 488 aa10.14□□□□□ -0.79
CHMP2A-202ENST00000596708 MCM3P25205 808 aa10.14□□□□□ -0.79
CHMP2A-202ENST00000596708 PKLRP30613 574 aa10.14□□□□□ -0.79
CHMP2A-202ENST00000596708 PPARGP37231 505 aaPredicted RBP10.14□□□□□ -0.79
CHMP2A-202ENST00000596708 GRIA3P42263 894 aa10.14□□□□□ -0.79
CHMP2A-202ENST00000596708 GDF10P55107 478 aa10.14□□□□□ -0.79
CHMP2A-202ENST00000596708 HSPA14Q0VDF9 509 aa10.14□□□□□ -0.79
CHMP2A-202ENST00000596708 GTF3C1Q12789 2109 aa10.14□□□□□ -0.79
CHMP2A-202ENST00000596708 CDH17Q12864 832 aa10.14□□□□□ -0.79
CHMP2A-202ENST00000596708 SF1Q15637 639 aaKnown RBP10.14□□□□□ -0.79
CHMP2A-202ENST00000596708 FASTKD1Q53R41 847 aaKnown RBP10.14□□□□□ -0.79
CHMP2A-202ENST00000596708 DNAJC21Q5F1R6 531 aaKnown RBP10.14□□□□□ -0.79
CHMP2A-202ENST00000596708 ZC3H12BQ5HYM0 836 aaKnown RBP10.14□□□□□ -0.79
CHMP2A-202ENST00000596708 CRB2Q5IJ48 1285 aa10.14□□□□□ -0.79
CHMP2A-202ENST00000596708 AGAP7PQ5VUJ5 663 aa10.14□□□□□ -0.79
CHMP2A-202ENST00000596708 PRAMEF13Q5VWM6 474 aa10.14□□□□□ -0.79
CHMP2A-202ENST00000596708 FIGLAQ6QHK4 219 aa10.14□□□□□ -0.79
CHMP2A-202ENST00000596708 PPP1R21Q6ZMI0 780 aa10.14□□□□□ -0.79
CHMP2A-202ENST00000596708 SHISA6Q6ZSJ9 500 aa10.14□□□□□ -0.79
CHMP2A-202ENST00000596708 OVCH1Q7RTY7 1134 aa10.14□□□□□ -0.79
CHMP2A-202ENST00000596708 KCNMB4Q86W47 210 aa10.14□□□□□ -0.79
CHMP2A-202ENST00000596708 UBL4BQ8N7F7 174 aa10.14□□□□□ -0.79
CHMP2A-202ENST00000596708 ST6GALNAC3Q8NDV1 305 aa10.14□□□□□ -0.79
CHMP2A-202ENST00000596708 OR6P1Q8NGX9 317 aa10.14□□□□□ -0.79
CHMP2A-202ENST00000596708 PPP4R1Q8TF05 950 aa10.14□□□□□ -0.79
CHMP2A-202ENST00000596708 UBE2Q2Q8WVN8 375 aa10.14□□□□□ -0.79
CHMP2A-202ENST00000596708 ALG3Q92685 438 aa10.14□□□□□ -0.79
CHMP2A-202ENST00000596708 HDAC10Q969S8 669 aa10.14□□□□□ -0.79
CHMP2A-202ENST00000596708 NACC2Q96BF6 587 aa10.14□□□□□ -0.79
CHMP2A-202ENST00000596708 VPS50Q96JG6 964 aa10.14□□□□□ -0.79
CHMP2A-202ENST00000596708 CNDP1Q96KN2 507 aa10.14□□□□□ -0.79
CHMP2A-202ENST00000596708 AGAP4Q96P64 663 aa10.14□□□□□ -0.79
CHMP2A-202ENST00000596708 IL17FQ96PD4 163 aa10.14□□□□□ -0.79
CHMP2A-202ENST00000596708 TMEM121Q9BTD3 319 aa10.14□□□□□ -0.79
CHMP2A-202ENST00000596708 TSSK1BQ9BXA7 367 aa10.14□□□□□ -0.79
CHMP2A-202ENST00000596708 SOX17Q9H6I2 414 aaPredicted RBP10.14□□□□□ -0.79
CHMP2A-202ENST00000596708 CUTCQ9NTM9 273 aa10.14□□□□□ -0.79
CHMP2A-202ENST00000596708 INTS7Q9NVH2 962 aaKnown RBP10.14□□□□□ -0.79
CHMP2A-202ENST00000596708 SLC39A10Q9ULF5 831 aa10.14□□□□□ -0.79
CHMP2A-202ENST00000596708 NOVA2Q9UNW9 492 aaKnown RBP10.14□□□□□ -0.79
CHMP2A-202ENST00000596708 CSAG2Q9Y5P2 127 aa10.14□□□□□ -0.79
CHMP2A-202ENST00000596708 PCNX1Q96RV3 2341 aa10.14□□□□□ -0.79
CHMP2A-202ENST00000596708 CPAMD8Q8IZJ3 1885 aa10.13□□□□□ -0.79
CHMP2A-202ENST00000596708 HEATR9A2RTY3 570 aa10.13□□□□□ -0.79
CHMP2A-202ENST00000596708 SOCS6O14544 535 aa10.13□□□□□ -0.79
CHMP2A-202ENST00000596708 DSCR3O14972 297 aa10.13□□□□□ -0.79
CHMP2A-202ENST00000596708 S1PR4O95977 384 aa10.13□□□□□ -0.79
CHMP2A-202ENST00000596708 APOA4P06727 396 aa10.13□□□□□ -0.79
CHMP2A-202ENST00000596708 CCR7P32248 378 aa10.13□□□□□ -0.79
CHMP2A-202ENST00000596708 PRAMEP78395 509 aa10.13□□□□□ -0.79
CHMP2A-202ENST00000596708 CDC16Q13042 620 aa10.13□□□□□ -0.79
CHMP2A-202ENST00000596708 GRM7Q14831 915 aa10.13□□□□□ -0.79
CHMP2A-202ENST00000596708 RBBP7Q16576 425 aa10.13□□□□□ -0.79
CHMP2A-202ENST00000596708 NKG7Q16617 165 aa10.13□□□□□ -0.79
CHMP2A-202ENST00000596708 TUBB8Q3ZCM7 444 aa10.13□□□□□ -0.79
CHMP2A-202ENST00000596708 TCTE1Q5JU00 501 aa10.13□□□□□ -0.79
CHMP2A-202ENST00000596708 TSTD2Q5T7W7 516 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms