RNA–Protein interactions for RNA: ENST00000594090.5

VRK3-206, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best)

Gene VRK3, Length 1,448 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-206ENST00000594090 ZFHX4Q86UP3 3567 aa14.07□□□□□ -0.16
VRK3-206ENST00000594090 A0A0J9YY10 115 aa14.07□□□□□ -0.16
VRK3-206ENST00000594090 TCRBV9S1A1TA0A576 114 aa14.07□□□□□ -0.16
VRK3-206ENST00000594090 MYO1CO00159 1063 aa14.07□□□□□ -0.16
VRK3-206ENST00000594090 PIAS1O75925 651 aa14.07□□□□□ -0.16
VRK3-206ENST00000594090 STK17BO94768 372 aa14.07□□□□□ -0.16
VRK3-206ENST00000594090 ERGP11308 486 aa14.07□□□□□ -0.16
VRK3-206ENST00000594090 FDXRP22570 491 aa14.07□□□□□ -0.16
VRK3-206ENST00000594090 RGS4P49798 205 aa14.07□□□□□ -0.16
VRK3-206ENST00000594090 GPX6P59796 221 aa14.07□□□□□ -0.16
VRK3-206ENST00000594090 PDAP1Q13442 181 aaKnown RBP14.07□□□□□ -0.16
VRK3-206ENST00000594090 TMTC4Q5T4D3 741 aa14.07□□□□□ -0.16
VRK3-206ENST00000594090 LRRC8EQ6NSJ5 796 aa14.07□□□□□ -0.16
VRK3-206ENST00000594090 PAQR3Q6TCH7 311 aa14.07□□□□□ -0.16
VRK3-206ENST00000594090 CYHR1Q6ZMK1 362 aa14.07□□□□□ -0.16
VRK3-206ENST00000594090 C3orf62Q6ZUJ4 267 aa14.07□□□□□ -0.16
VRK3-206ENST00000594090 CYS1Q717R9 158 aa14.07□□□□□ -0.16
VRK3-206ENST00000594090 ZC3HC1Q86WB0 502 aaKnown RBP14.07□□□□□ -0.16
VRK3-206ENST00000594090 PPP1R3BQ86XI6 285 aa14.07□□□□□ -0.16
VRK3-206ENST00000594090 RASGRP3Q8IV61 690 aa14.07□□□□□ -0.16
VRK3-206ENST00000594090 C19orf47Q8N9M1 422 aaKnown RBP14.07□□□□□ -0.16
VRK3-206ENST00000594090 HMGCLL1Q8TB92 370 aa14.07□□□□□ -0.16
VRK3-206ENST00000594090 CDKL2Q92772 493 aa14.07□□□□□ -0.16
VRK3-206ENST00000594090 CRELD1Q96HD1 420 aa14.07□□□□□ -0.16
VRK3-206ENST00000594090 ELMO2Q96JJ3 720 aa14.07□□□□□ -0.16
VRK3-206ENST00000594090 OLFM1Q99784 485 aa14.07□□□□□ -0.16
VRK3-206ENST00000594090 FAM129AQ9BZQ8 928 aa14.07□□□□□ -0.16
VRK3-206ENST00000594090 SPRY4Q9C004 299 aa14.07□□□□□ -0.16
VRK3-206ENST00000594090 KLHL25Q9H0H3 589 aa14.07□□□□□ -0.16
VRK3-206ENST00000594090 PDE7BQ9NP56 450 aa14.07□□□□□ -0.16
VRK3-206ENST00000594090 PILRAQ9UKJ1 303 aa14.07□□□□□ -0.16
VRK3-206ENST00000594090 RARRES3Q9UL19 164 aa14.07□□□□□ -0.16
VRK3-206ENST00000594090 TMEM184BQ9Y519 407 aaPredicted RBP14.07□□□□□ -0.16
VRK3-206ENST00000594090 KMT2BQ9UMN6 2715 aaPredicted RBP14.06□□□□□ -0.16
VRK3-206ENST00000594090 LAMA5O15230 3695 aa14.06□□□□□ -0.16
VRK3-206ENST00000594090 FAM159BA6NKW6 160 aa14.06□□□□□ -0.16
VRK3-206ENST00000594090 CXorf49A8MYA2 514 aaPredicted RBP14.06□□□□□ -0.16
VRK3-206ENST00000594090 GFYI3L273 518 aa14.06□□□□□ -0.16
VRK3-206ENST00000594090 RAD1O60671 282 aa14.06□□□□□ -0.16
VRK3-206ENST00000594090 TIAF1O95411 115 aa14.06□□□□□ -0.16
VRK3-206ENST00000594090 DLGAP3O95886 979 aa14.06□□□□□ -0.16
VRK3-206ENST00000594090 C1QAP02745 245 aa14.06□□□□□ -0.16
VRK3-206ENST00000594090 ZNF28P17035 718 aa14.06□□□□□ -0.16
VRK3-206ENST00000594090 ATP1A2P50993 1020 aa14.06□□□□□ -0.16
VRK3-206ENST00000594090 TUBB4BP68371 445 aa14.06□□□□□ -0.16
VRK3-206ENST00000594090 GPR19Q15760 415 aa14.06□□□□□ -0.16
VRK3-206ENST00000594090 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.06□□□□□ -0.16
VRK3-206ENST00000594090 FBXO15Q8NCQ5 510 aaPredicted RBP14.06□□□□□ -0.16
VRK3-206ENST00000594090 OR9A1PQ8NGU1 263 aa14.06□□□□□ -0.16
VRK3-206ENST00000594090 EEF1AKMT1Q8WVE0 214 aa14.06□□□□□ -0.16
VRK3-206ENST00000594090 ASB11Q8WXH4 323 aa14.06□□□□□ -0.16
VRK3-206ENST00000594090 SLC22A18Q96BI1 424 aa14.06□□□□□ -0.16
VRK3-206ENST00000594090 ZNF501Q96CX3 271 aaPredicted RBP14.06□□□□□ -0.16
VRK3-206ENST00000594090 RNF31Q96EP0 1072 aa14.06□□□□□ -0.16
VRK3-206ENST00000594090 MCMBPQ9BTE3 642 aa14.06□□□□□ -0.16
VRK3-206ENST00000594090 ULBP3Q9BZM4 244 aa14.06□□□□□ -0.16
VRK3-206ENST00000594090 RHOJQ9H4E5 214 aa14.06□□□□□ -0.16
VRK3-206ENST00000594090 LRRC4CQ9HCJ2 640 aa14.06□□□□□ -0.16
VRK3-206ENST00000594090 WDR70Q9NW82 654 aa14.06□□□□□ -0.16
VRK3-206ENST00000594090 VWA7Q9Y334 891 aa14.06□□□□□ -0.16
VRK3-206ENST00000594090 FAM95CA0A1B0GW59 222 aa14.05□□□□□ -0.16
VRK3-206ENST00000594090 PRICKLE3O43900 615 aaPredicted RBP14.05□□□□□ -0.16
VRK3-206ENST00000594090 SPAG6O75602 509 aa14.05□□□□□ -0.16
VRK3-206ENST00000594090 KRT37O76014 449 aa14.05□□□□□ -0.16
VRK3-206ENST00000594090 MSL3P1P0C860 447 aa14.05□□□□□ -0.16
VRK3-206ENST00000594090 MAP4P27816 1152 aaKnown RBP14.05□□□□□ -0.16
VRK3-206ENST00000594090 PGGT1BP53609 377 aa14.05□□□□□ -0.16
VRK3-206ENST00000594090 UCNP55089 124 aa14.05□□□□□ -0.16
VRK3-206ENST00000594090 TMPRSS3P57727 454 aa14.05□□□□□ -0.16
VRK3-206ENST00000594090 SRSF6Q13247 344 aaKnown RBP14.05□□□□□ -0.16
VRK3-206ENST00000594090 ZIC1Q15915 447 aa14.05□□□□□ -0.16
VRK3-206ENST00000594090 CYP2A13Q16696 494 aa14.05□□□□□ -0.16
VRK3-206ENST00000594090 UBE2R2Q712K3 238 aaPredicted RBP14.05□□□□□ -0.16
VRK3-206ENST00000594090 TIPARPQ7Z3E1 657 aaKnown RBP14.05□□□□□ -0.16
VRK3-206ENST00000594090 BPHLQ86WA6 291 aaPredicted RBP14.05□□□□□ -0.16
VRK3-206ENST00000594090 FAM20CQ8IXL6 584 aa14.05□□□□□ -0.16
VRK3-206ENST00000594090 NKD1Q969G9 470 aa14.05□□□□□ -0.16
VRK3-206ENST00000594090 LINGO1Q96FE5 620 aa14.05□□□□□ -0.16
VRK3-206ENST00000594090 VPS39Q96JC1 886 aa14.05□□□□□ -0.16
VRK3-206ENST00000594090 FCRL4Q96PJ5 515 aa14.05□□□□□ -0.16
VRK3-206ENST00000594090 CCNL2Q96S94 520 aaPredicted RBP14.05□□□□□ -0.16
VRK3-206ENST00000594090 PKP4Q99569 1192 aa14.05□□□□□ -0.16
VRK3-206ENST00000594090 CPNE1Q99829 537 aa14.05□□□□□ -0.16
VRK3-206ENST00000594090 FANCEQ9HB96 536 aa14.05□□□□□ -0.16
VRK3-206ENST00000594090 SYTL2Q9HCH5 934 aa14.05□□□□□ -0.16
VRK3-206ENST00000594090 MTRF1LQ9UGC7 380 aaKnown RBP14.05□□□□□ -0.16
VRK3-206ENST00000594090 LNPEPQ9UIQ6 1025 aa14.05□□□□□ -0.16
VRK3-206ENST00000594090 EPG5Q9HCE0 2579 aa14.04□□□□□ -0.16
VRK3-206ENST00000594090 TEX51A0A1B0GUA7 166 aa14.04□□□□□ -0.16
VRK3-206ENST00000594090 A0A1W2PPV9 198 aa14.04□□□□□ -0.16
VRK3-206ENST00000594090 MAP3K7O43318 606 aa14.04□□□□□ -0.16
VRK3-206ENST00000594090 ZBTB14O43829 449 aa14.04□□□□□ -0.16
VRK3-206ENST00000594090 SNRNP200O75643 2136 aaKnown RBP14.04□□□□□ -0.16
VRK3-206ENST00000594090 KIAA0754O94854 1291 aa14.04□□□□□ -0.16
VRK3-206ENST00000594090 TSPAN12O95859 305 aa14.04□□□□□ -0.16
VRK3-206ENST00000594090 SLC16A8O95907 504 aa14.04□□□□□ -0.16
VRK3-206ENST00000594090 MAGP20916 626 aa14.04□□□□□ -0.16
VRK3-206ENST00000594090 PSMB5P28074 263 aa14.04□□□□□ -0.16
VRK3-206ENST00000594090 OAS2P29728 719 aaKnown RBP14.04□□□□□ -0.16
VRK3-206ENST00000594090 ECHS1P30084 290 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms