RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 WDR12Q9GZL7 423 aaKnown RBP16.12■□□□□ 0.17
LIG1-206ENST00000594067 KAT8Q9H7Z6 458 aaKnown RBP16.12■□□□□ 0.17
LIG1-206ENST00000594067 LATS2Q9NRM7 1088 aa16.12■□□□□ 0.17
LIG1-206ENST00000594067 DCAF13Q9NV06 445 aaKnown RBP16.12■□□□□ 0.17
LIG1-206ENST00000594067 USE1Q9NZ43 259 aa16.12■□□□□ 0.17
LIG1-206ENST00000594067 VPS51Q9UID3 782 aa16.12■□□□□ 0.17
LIG1-206ENST00000594067 TMEM88BA6NKF7 163 aa16.11■□□□□ 0.17
LIG1-206ENST00000594067 SLC1A7O00341 560 aa16.11■□□□□ 0.17
LIG1-206ENST00000594067 DNAJB5O75953 348 aa16.11■□□□□ 0.17
LIG1-206ENST00000594067 PGLSO95336 258 aa16.11■□□□□ 0.17
LIG1-206ENST00000594067 BCKDHAP12694 445 aa16.11■□□□□ 0.17
LIG1-206ENST00000594067 HMGA1P17096 107 aaKnown RBP16.11■□□□□ 0.17
LIG1-206ENST00000594067 RPS3P23396 243 aaKnown RBP eCLIP16.11■□□□□ 0.17
LIG1-206ENST00000594067 SEMG2Q02383 582 aa16.11■□□□□ 0.17
LIG1-206ENST00000594067 CPSF6Q16630 551 aaKnown RBP eCLIP16.11■□□□□ 0.17
LIG1-206ENST00000594067 USP39Q53GS9 565 aaKnown RBP16.11■□□□□ 0.17
LIG1-206ENST00000594067 RNF180Q86T96 592 aa16.11■□□□□ 0.17
LIG1-206ENST00000594067 SLCO6A1Q86UG4 719 aa16.11■□□□□ 0.17
LIG1-206ENST00000594067 ANKRD46Q86W74 232 aa16.11■□□□□ 0.17
LIG1-206ENST00000594067 WFDC5Q8TCV5 224 aa16.11■□□□□ 0.17
LIG1-206ENST00000594067 ZIC5Q96T25 663 aa16.11■□□□□ 0.17
LIG1-206ENST00000594067 SH3GL1Q99961 368 aa16.11■□□□□ 0.17
LIG1-206ENST00000594067 PSD2Q9BQI7 771 aa16.11■□□□□ 0.17
LIG1-206ENST00000594067 CCDC90BQ9GZT6 254 aa16.11■□□□□ 0.17
LIG1-206ENST00000594067 IL26Q9NPH9 171 aa16.11■□□□□ 0.17
LIG1-206ENST00000594067 TRPM5Q9NZQ8 1165 aa16.11■□□□□ 0.17
LIG1-206ENST00000594067 SNX5Q9Y5X3 404 aa16.11■□□□□ 0.17
LIG1-206ENST00000594067 SEC24AO95486 1093 aa16.11■□□□□ 0.17
LIG1-206ENST00000594067 MYCLP1P12525 358 aaPredicted RBP16.11■□□□□ 0.17
LIG1-206ENST00000594067 CSKP41240 450 aa16.11■□□□□ 0.17
LIG1-206ENST00000594067 PLD1Q13393 1074 aa16.11■□□□□ 0.17
LIG1-206ENST00000594067 TOP3AQ13472 1001 aaPredicted RBP16.11■□□□□ 0.17
LIG1-206ENST00000594067 TMEM53Q6P2H8 277 aa16.11■□□□□ 0.17
LIG1-206ENST00000594067 DET1Q7L5Y6 550 aa16.11■□□□□ 0.17
LIG1-206ENST00000594067 TRIM46Q7Z4K8 759 aa16.11■□□□□ 0.17
LIG1-206ENST00000594067 SNX20Q7Z614 316 aa16.11■□□□□ 0.17
LIG1-206ENST00000594067 ADHFE1Q8IWW8 467 aa16.11■□□□□ 0.17
LIG1-206ENST00000594067 OR5K1Q8NHB7 308 aa16.11■□□□□ 0.17
LIG1-206ENST00000594067 FAM120BQ96EK7 910 aaKnown RBP16.11■□□□□ 0.17
LIG1-206ENST00000594067 ITCHQ96J02 903 aa16.11■□□□□ 0.17
LIG1-206ENST00000594067 CORO1BQ9BR76 489 aa16.11■□□□□ 0.17
LIG1-206ENST00000594067 ATP13A3Q9H7F0 1226 aa16.11■□□□□ 0.17
LIG1-206ENST00000594067 CRLS1Q9UJA2 301 aa16.11■□□□□ 0.17
LIG1-206ENST00000594067 GPC6Q9Y625 555 aaPredicted RBP16.11■□□□□ 0.17
LIG1-206ENST00000594067 ZNF99A8MXY4 864 aaPredicted RBP16.1■□□□□ 0.17
LIG1-206ENST00000594067 EBLN1P0CF75 366 aa16.1■□□□□ 0.17
LIG1-206ENST00000594067 EPB42P16452 691 aa16.1■□□□□ 0.17
LIG1-206ENST00000594067 ITGALP20701 1170 aa16.1■□□□□ 0.17
LIG1-206ENST00000594067 TGM1P22735 817 aa16.1■□□□□ 0.17
LIG1-206ENST00000594067 EMX1Q04741 257 aaPredicted RBP16.1■□□□□ 0.17
LIG1-206ENST00000594067 INO80DQ53TQ3 878 aaPredicted RBP16.1■□□□□ 0.17
LIG1-206ENST00000594067 GPR149Q86SP6 731 aa16.1■□□□□ 0.17
LIG1-206ENST00000594067 ADGRG2Q8IZP9 1017 aa16.1■□□□□ 0.17
LIG1-206ENST00000594067 PIK3C3Q8NEB9 887 aa16.1■□□□□ 0.17
LIG1-206ENST00000594067 UPF1Q92900 1129 aaKnown RBP eCLIP16.1■□□□□ 0.17
LIG1-206ENST00000594067 INPP5KQ9BT40 448 aa16.1■□□□□ 0.17
LIG1-206ENST00000594067 KLF16Q9BXK1 252 aaPredicted RBP16.1■□□□□ 0.17
LIG1-206ENST00000594067 C1orf109Q9NX04 203 aa16.1■□□□□ 0.17
LIG1-206ENST00000594067 TRPS1Q9UHF7 1281 aa16.1■□□□□ 0.17
LIG1-206ENST00000594067 LRFN2Q9ULH4 789 aa16.1■□□□□ 0.17
LIG1-206ENST00000594067 DLGAP4Q9Y2H0 992 aa16.1■□□□□ 0.17
LIG1-206ENST00000594067 TRBV5-3A0A0A0MS03 114 aa16.1■□□□□ 0.17
LIG1-206ENST00000594067 SMAD6O43541 496 aaKnown RBP16.1■□□□□ 0.17
LIG1-206ENST00000594067 GABARAPO95166 117 aa16.1■□□□□ 0.17
LIG1-206ENST00000594067 FSHRP23945 695 aa16.1■□□□□ 0.17
LIG1-206ENST00000594067 ACRV1P26436 265 aa16.1■□□□□ 0.17
LIG1-206ENST00000594067 NRIP1P48552 1158 aa16.1■□□□□ 0.17
LIG1-206ENST00000594067 ELAVL2Q12926 359 aaKnown RBP16.1■□□□□ 0.17
LIG1-206ENST00000594067 CHRNA6Q15825 494 aa16.1■□□□□ 0.17
LIG1-206ENST00000594067 GPRC6AQ5T6X5 926 aa16.1■□□□□ 0.17
LIG1-206ENST00000594067 LINC00299Q6ZSB3 139 aa16.1■□□□□ 0.17
LIG1-206ENST00000594067 FAR1Q8WVX9 515 aa16.1■□□□□ 0.17
LIG1-206ENST00000594067 NTMT1Q9BV86 223 aa16.1■□□□□ 0.17
LIG1-206ENST00000594067 ACPTQ9BZG2 426 aa16.1■□□□□ 0.17
LIG1-206ENST00000594067 ABCG8Q9H221 673 aa16.1■□□□□ 0.17
LIG1-206ENST00000594067 C3orf18Q9UK00 162 aa16.1■□□□□ 0.17
LIG1-206ENST00000594067 PLXNA4Q9HCM2 1894 aa16.09■□□□□ 0.17
LIG1-206ENST00000594067 TBKBP1A7MCY6 615 aa16.09■□□□□ 0.17
LIG1-206ENST00000594067 MAN1A2O60476 641 aa16.09■□□□□ 0.17
LIG1-206ENST00000594067 MITFO75030 526 aaPredicted RBP16.09■□□□□ 0.17
LIG1-206ENST00000594067 WDR47O94967 919 aa16.09■□□□□ 0.17
LIG1-206ENST00000594067 BPIP17213 487 aa16.09■□□□□ 0.17
LIG1-206ENST00000594067 ACVR2AP27037 513 aa16.09■□□□□ 0.17
LIG1-206ENST00000594067 TUFMP49411 452 aaKnown RBP16.09■□□□□ 0.17
LIG1-206ENST00000594067 LAPTM4AQ15012 233 aa16.09■□□□□ 0.17
LIG1-206ENST00000594067 ADPRMQ3LIE5 342 aa16.09■□□□□ 0.17
LIG1-206ENST00000594067 ZNF691Q5VV52 312 aa16.09■□□□□ 0.17
LIG1-206ENST00000594067 ZCCHC7Q8N3Z6 543 aaKnown RBP16.09■□□□□ 0.17
LIG1-206ENST00000594067 MFSD4AQ8N468 514 aa16.09■□□□□ 0.17
LIG1-206ENST00000594067 CHCHD4Q8N4Q1 142 aa16.09■□□□□ 0.17
LIG1-206ENST00000594067 CNIH3Q8TBE1 160 aa16.09■□□□□ 0.17
LIG1-206ENST00000594067 S100ZQ8WXG8 99 aa16.09■□□□□ 0.17
LIG1-206ENST00000594067 AFF4Q9UHB7 1163 aaKnown RBP16.09■□□□□ 0.17
LIG1-206ENST00000594067 PCDHGB1Q9Y5G3 927 aa16.09■□□□□ 0.17
LIG1-206ENST00000594067 XPNPEP2O43895 674 aa16.09■□□□□ 0.17
LIG1-206ENST00000594067 NBNO60934 754 aa16.09■□□□□ 0.17
LIG1-206ENST00000594067 STK16O75716 305 aa16.09■□□□□ 0.17
LIG1-206ENST00000594067 PDYNP01213 254 aa16.09■□□□□ 0.17
LIG1-206ENST00000594067 HNF1BP35680 557 aa16.09■□□□□ 0.17
LIG1-206ENST00000594067 NEK2P51955 445 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms