RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 ITGA3P26006 1051 aa15.71■□□□□ 0.11
LIG1-205ENST00000593425 CCR7P32248 378 aa15.71■□□□□ 0.11
LIG1-205ENST00000593425 RAB28P51157 221 aa15.71■□□□□ 0.11
LIG1-205ENST00000593425 HIF1AQ16665 826 aa15.71■□□□□ 0.11
LIG1-205ENST00000593425 P3H1Q32P28 736 aa15.71■□□□□ 0.11
LIG1-205ENST00000593425 TTLL10Q6ZVT0 673 aa15.71■□□□□ 0.11
LIG1-205ENST00000593425 COX15Q7KZN9 410 aa15.71■□□□□ 0.11
LIG1-205ENST00000593425 VRK3Q8IV63 474 aa15.71■□□□□ 0.11
LIG1-205ENST00000593425 SLC22A15Q8IZD6 547 aa15.71■□□□□ 0.11
LIG1-205ENST00000593425 C2orf73Q8N5S3 287 aaPredicted RBP15.71■□□□□ 0.11
LIG1-205ENST00000593425 OR52K1Q8NGK4 314 aa15.71■□□□□ 0.11
LIG1-205ENST00000593425 UBE2Q2Q8WVN8 375 aa15.71■□□□□ 0.11
LIG1-205ENST00000593425 IL17FQ96PD4 163 aa15.71■□□□□ 0.11
LIG1-205ENST00000593425 ALS2CR12Q96Q35 445 aa15.71■□□□□ 0.11
LIG1-205ENST00000593425 SPSB2Q99619 263 aa15.71■□□□□ 0.11
LIG1-205ENST00000593425 TMEM121Q9BTD3 319 aa15.71■□□□□ 0.11
LIG1-205ENST00000593425 LACRTQ9GZZ8 138 aa15.71■□□□□ 0.11
LIG1-205ENST00000593425 SLC2A6Q9UGQ3 507 aa15.71■□□□□ 0.11
LIG1-205ENST00000593425 FBXL4Q9UKA2 621 aa15.71■□□□□ 0.11
LIG1-205ENST00000593425 NOVA2Q9UNW9 492 aaKnown RBP15.71■□□□□ 0.11
LIG1-205ENST00000593425 EPN1Q9Y6I3 576 aaPredicted RBP15.71■□□□□ 0.11
LIG1-205ENST00000593425 RP1L1Q8IWN7 2480 aaPredicted RBP15.71■□□□□ 0.1
LIG1-205ENST00000593425 A0A1B0GX78 115 aa15.7■□□□□ 0.1
LIG1-205ENST00000593425 SOCS6O14544 535 aa15.7■□□□□ 0.1
LIG1-205ENST00000593425 GOT2P00505 430 aaKnown RBP15.7■□□□□ 0.1
LIG1-205ENST00000593425 MMP11P24347 488 aa15.7■□□□□ 0.1
LIG1-205ENST00000593425 MCM3P25205 808 aa15.7■□□□□ 0.1
LIG1-205ENST00000593425 PLOD1Q02809 727 aaPredicted RBP15.7■□□□□ 0.1
LIG1-205ENST00000593425 AIMP2Q13155 320 aaKnown RBP15.7■□□□□ 0.1
LIG1-205ENST00000593425 KLF1Q13351 362 aaPredicted RBP15.7■□□□□ 0.1
LIG1-205ENST00000593425 ELOAQ14241 798 aaKnown RBP15.7■□□□□ 0.1
LIG1-205ENST00000593425 GRB7Q14451 532 aa15.7■□□□□ 0.1
LIG1-205ENST00000593425 SEMA3AQ14563 771 aa15.7■□□□□ 0.1
LIG1-205ENST00000593425 MCATQ8IVS2 390 aaKnown RBP15.7■□□□□ 0.1
LIG1-205ENST00000593425 ACRBPQ8NEB7 543 aa15.7■□□□□ 0.1
LIG1-205ENST00000593425 SLC35B2Q8TB61 432 aa15.7■□□□□ 0.1
LIG1-205ENST00000593425 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.7■□□□□ 0.1
LIG1-205ENST00000593425 DLG3Q92796 817 aa15.7■□□□□ 0.1
LIG1-205ENST00000593425 HDAC10Q969S8 669 aa15.7■□□□□ 0.1
LIG1-205ENST00000593425 FKBP10Q96AY3 582 aa15.7■□□□□ 0.1
LIG1-205ENST00000593425 CALR3Q96L12 384 aaKnown RBP15.7■□□□□ 0.1
LIG1-205ENST00000593425 WDR77Q9BQA1 342 aaPredicted RBP15.7■□□□□ 0.1
LIG1-205ENST00000593425 TRIM5Q9C035 493 aa15.7■□□□□ 0.1
LIG1-205ENST00000593425 PACSIN2Q9UNF0 486 aaPredicted RBP15.7■□□□□ 0.1
LIG1-205ENST00000593425 TCRBV7S2A1N4TA0A589 114 aa15.69■□□□□ 0.1
LIG1-205ENST00000593425 GOLGA6L9A6NEM1 432 aa15.69■□□□□ 0.1
LIG1-205ENST00000593425 IQCF5A8MTL0 148 aa15.69■□□□□ 0.1
LIG1-205ENST00000593425 BTNL10A8MVZ5 291 aa15.69■□□□□ 0.1
LIG1-205ENST00000593425 E2F3O00716 465 aa15.69■□□□□ 0.1
LIG1-205ENST00000593425 KDM1AO60341 852 aa15.69■□□□□ 0.1
LIG1-205ENST00000593425 ONECUT2O95948 504 aa15.69■□□□□ 0.1
LIG1-205ENST00000593425 HSPA14Q0VDF9 509 aa15.69■□□□□ 0.1
LIG1-205ENST00000593425 NKG7Q16617 165 aa15.69■□□□□ 0.1
LIG1-205ENST00000593425 DNAJC21Q5F1R6 531 aaKnown RBP15.69■□□□□ 0.1
LIG1-205ENST00000593425 PRAMEF13Q5VWM6 474 aa15.69■□□□□ 0.1
LIG1-205ENST00000593425 FCRL6Q6DN72 434 aa15.69■□□□□ 0.1
LIG1-205ENST00000593425 RAD9BQ6WBX8 426 aa15.69■□□□□ 0.1
LIG1-205ENST00000593425 SHISA6Q6ZSJ9 500 aa15.69■□□□□ 0.1
LIG1-205ENST00000593425 ZNF534Q76KX8 674 aa15.69■□□□□ 0.1
LIG1-205ENST00000593425 OVCH1Q7RTY7 1134 aa15.69■□□□□ 0.1
LIG1-205ENST00000593425 DTWD1Q8N5C7 304 aa15.69■□□□□ 0.1
LIG1-205ENST00000593425 METTL27Q8N6F8 245 aaPredicted RBP15.69■□□□□ 0.1
LIG1-205ENST00000593425 TTC13Q8NBP0 860 aa15.69■□□□□ 0.1
LIG1-205ENST00000593425 ST6GALNAC3Q8NDV1 305 aa15.69■□□□□ 0.1
LIG1-205ENST00000593425 PPP4R1Q8TF05 950 aa15.69■□□□□ 0.1
LIG1-205ENST00000593425 ZNF778Q96MU6 729 aa15.69■□□□□ 0.1
LIG1-205ENST00000593425 SOX17Q9H6I2 414 aaPredicted RBP15.69■□□□□ 0.1
LIG1-205ENST00000593425 CTSFQ9UBX1 484 aa15.69■□□□□ 0.1
LIG1-205ENST00000593425 CDC23Q9UJX2 597 aa15.69■□□□□ 0.1
LIG1-205ENST00000593425 HS3ST3B1Q9Y662 390 aa15.69■□□□□ 0.1
LIG1-205ENST00000593425 DOPEY1Q5JWR5 2465 aa15.68■□□□□ 0.1
LIG1-205ENST00000593425 MDC1Q14676 2089 aaKnown RBP15.68■□□□□ 0.1
LIG1-205ENST00000593425 DSCR3O14972 297 aa15.68■□□□□ 0.1
LIG1-205ENST00000593425 PSMD3O43242 534 aa15.68■□□□□ 0.1
LIG1-205ENST00000593425 GPC4O75487 556 aa15.68■□□□□ 0.1
LIG1-205ENST00000593425 PTMAP06454 111 aaKnown RBP15.68■□□□□ 0.1
LIG1-205ENST00000593425 CD9P21926 228 aa15.68■□□□□ 0.1
LIG1-205ENST00000593425 GRIA1P42261 906 aa15.68■□□□□ 0.1
LIG1-205ENST00000593425 GRIA3P42263 894 aa15.68■□□□□ 0.1
LIG1-205ENST00000593425 ARSFP54793 590 aa15.68■□□□□ 0.1
LIG1-205ENST00000593425 CDH17Q12864 832 aa15.68■□□□□ 0.1
LIG1-205ENST00000593425 SKOR2Q2VWA4 1001 aaPredicted RBP15.68■□□□□ 0.1
LIG1-205ENST00000593425 TSTD2Q5T7W7 516 aa15.68■□□□□ 0.1
LIG1-205ENST00000593425 AFTPHQ6ULP2 937 aa15.68■□□□□ 0.1
LIG1-205ENST00000593425 KIRREL2Q6UWL6 708 aa15.68■□□□□ 0.1
LIG1-205ENST00000593425 IGFL2Q6UWQ7 119 aa15.68■□□□□ 0.1
LIG1-205ENST00000593425 LINC00523Q86TU6 105 aa15.68■□□□□ 0.1
LIG1-205ENST00000593425 KCNMB4Q86W47 210 aa15.68■□□□□ 0.1
LIG1-205ENST00000593425 DCUN1D3Q8IWE4 304 aa15.68■□□□□ 0.1
LIG1-205ENST00000593425 DNAAF3Q8N9W5 541 aa15.68■□□□□ 0.1
LIG1-205ENST00000593425 CFAP61Q8NHU2 1237 aa15.68■□□□□ 0.1
LIG1-205ENST00000593425 MESP1Q9BRJ9 268 aa15.68■□□□□ 0.1
LIG1-205ENST00000593425 SLC26A1Q9H2B4 701 aa15.68■□□□□ 0.1
LIG1-205ENST00000593425 WDR54Q9H977 334 aa15.68■□□□□ 0.1
LIG1-205ENST00000593425 AGPAT4Q9NRZ5 378 aa15.68■□□□□ 0.1
LIG1-205ENST00000593425 CUTCQ9NTM9 273 aa15.68■□□□□ 0.1
LIG1-205ENST00000593425 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.68■□□□□ 0.1
LIG1-205ENST00000593425 AMFRQ9UKV5 643 aa15.68■□□□□ 0.1
LIG1-205ENST00000593425 HEATR9A2RTY3 570 aa15.67■□□□□ 0.1
LIG1-205ENST00000593425 S1PR4O95977 384 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms